NO04G03620, NO04G03620 (gene) Nannochloropsis oceanica

Overview
NameNO04G03620
Unique NameNO04G03620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3664
Alignment locationchr4:983912..987575 +

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Properties
Property NameValue
DescriptionATP-dependent DNA helicase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:983912..987575 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000723telomere maintenance
GO:0006281DNA repair
GO:0016043cellular component organization
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010285DNA_helicase_pif1-like
IPR003593AAA+_ATPase
Homology
BLAST of NO04G03620 vs. NCBI_GenBank
Match: EWM28750.1 (atp-dependent dna helicase pif1 [Nannochloropsis gaditana])

HSP 1 Score: 748.4 bits (1931), Expect = 2.100e-212
Identity = 368/481 (76.51%), Postives = 412/481 (85.65%), Query Frame = 0
Query:   27 QGKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQLRKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFYDAQIKGKSRLETTDESSWLPTLAPNWRPEHAKYKEKDXXXXXXXXXXXXXXXXXXXXXXXKRDGPYSSWKSGSVT 508
            +G NVYYSGRAGSGK+HLLRAII+RAPAGKT+VTASTGIAA+NVGGTTLHSFAGIGLGDDP+EVLKERA K+R A ANW A EVLIVDEVSMLHGSLLSKL+ IAKHVKNQP+ PFGGVQLIFTGDFFQLPPVSRGR+ GDHDYAFLHPVW+ELFGP    CYEL++VFRQAE+PLVALLNDVRYG+ASA S+ LL+EL R+L+PP GIEPTLLFATN RVD MNQ+KL  LAG E+HVF+ATD+GVEPFLGQLRK+CLAE +LRLR GAQVMLLKN+N   GLVNGAKGR+  FT+DEEHLPIVEFASG++ S+A EEWA+E SERGRTVKKA R+QVPLKLGWA+TIHKSQGMGLEWLE KLDDVFE+GQAYVALSRA+KL GLRV+ FRQDRFRVSP V+SFYD+QIKGK+R E  +ESSWL +LAPNW PEH KY+E                         KR+GPYSSW SGSVT
Sbjct:  128 EGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGP--ESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFYDSQIKGKTRREPGEESSWLSSLAPNWLPEHRKYRENPGGVVGSMTGRSSGRHEEHGAWTGKREGPYSSWNSGSVT 606          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: XP_020895815.1 (uncharacterized protein LOC110234765 [Exaiptasia pallida])

HSP 1 Score: 319.7 bits (818), Expect = 2.400e-83
Identity = 198/454 (43.61%), Postives = 281/454 (61.89%), Query Frame = 0
Query:   28 GKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVL---KERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQLRKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFYDAQIK----GKSRLETTDESSWLPT-----LAPNWRPEHAKYKEKD 470
            GKNV+Y+G AG+GK+ LL+ I + AP G TYVTA TG+AA+  GG+TLHSFAGIGLG+   E L     R SK +    NW+  +VLI+DE+SML G L  KL+ IA +++N   LPFGG+QL+  GDFFQLPP+ +  +    +Y F    W +          EL++++RQ++  LV LL +VRY   S  SL LL+ L R + P   IEPT L++ N RV+ +N  KL+SL  +EE  + A D G  P++  + K  +A  KL L+ GAQVML+KN+   + L+NG++G + GF  D +  P+V+F  G  +++   EW +E S  G+ +  A R QVPLKL WA+TIHKSQGM +++L+V L +VF +GQAYVALSRA  + GL+V++F  ++F  S  VI FY+ ++K    G S   T    S   T      AP+  P    +K ++
Sbjct:   86 GKNVFYTGNAGTGKTTLLKEIRKCAPDG-TYVTALTGVAAVQAGGSTLHSFAGIGLGNGTKESLCNIVRRGSKVQ----NWRKAKVLIIDELSMLDGRLFDKLEYIACNIRNCD-LPFGGLQLVVCGDFFQLPPIQKVGE-TCVNYCFQSKSWDKCIEHN----LELTQIYRQSDPRLVKLLYEVRYKCLSDESLELLKFLKRPI-PNTDIEPTKLYSHNARVNDINNAKLKSLPDQEEMTYMAEDHGQAPYVDNMSKYVIAMDKLVLKIGAQVMLIKNLT--EELINGSRGVVEGF--DNDGWPLVKFVDGQLKTIKEMEWNLENSS-GKVL--AVRTQVPLKLAWAITIHKSQGMSIDFLQVDLKNVFSQGQAYVALSRARTIEGLQVLSFDVNKFTTSDAVIKFYEDKVKPAPTGDSNTATDARPSNFVTPNFLRRAPSSTPSSTPFKRRN 520          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: OAO14610.1 (DNA helicase PIF1 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 313.9 bits (803), Expect = 1.300e-81
Identity = 180/420 (42.86%), Postives = 254/420 (60.48%), Query Frame = 0
Query:   20 RLHTPSSQGKNVYYSGRAGSGKSHLLRAII----ERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQLRKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHD---EEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFY 433
            +++T + +G +++++G AG+GKS++LR I+    ++  A + +VTASTGIAA N+GGTTLHSFA IGLGD+ +     R  +++ A   WQ C VLI+DE+SML G    KL+A+++ ++      FGG+Q+I  GDFFQLPPV  G+      Y F    W  +          ++KVFRQ +E   ALL D+RYGK S  S  LL+ L R       I PT LFA NE VD+ N   L  L       ++A D G + +L QL+K+C A   L L+ GAQVMLLKN++   GLVNG++G +  F  D   E+ +P+V FA+G  + + P E    T E G  V  A RVQ+PLKL W ++IHKSQGM ++ L+V L  VFE G  YVALSR + +  +++  F     R +P+VI+FY
Sbjct:   40 KVYTAAVEGYSIFFTGDAGTGKSYVLRLIVSALKKKYGANRVFVTASTGIAACNIGGTTLHSFASIGLGDESITKCVHRVLQNKKAKKRWQDCVVLIIDEISMLDGCFFDKLEAVSRRIRGDESC-FGGIQIIACGDFFQLPPVGLGK--NKVIYCFESECWNTVIQR----TLIMTKVFRQKDEEFQALLRDIRYGKVSQRSRTLLQRLERNELNTGKIVPTKLFALNESVDQYNTSALAQLPDTHCITYKAIDEGQDVYLKQLQKNCQAPAVLPLKVGAQVMLLKNLSVEMGLVNGSRGVVDSFMKDKESEQEIPVVRFATGSGEVLHPMERKEFTIELGEKV-VARRVQLPLKLAWGISIHKSQGMTIDLLDVDLHGVFEVGMTYVALSRGVSIDRMKLRNFSMRGIRTNPKVIAFY 451          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: OQR75204.1 (ATP-dependent DNA helicase PIF1-like [Tropilaelaps mercedesae])

HSP 1 Score: 313.2 bits (801), Expect = 2.200e-81
Identity = 179/405 (44.20%), Postives = 252/405 (62.22%), Query Frame = 0
Query:   28 GKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQLRKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFY 433
            G +V+++G AG+GK+ LL+ I+   P   T+VTA+TGIAA ++GG+T+H+FAGIGLG+  V  L E+  KS  A ANW+ C+ LI+DE+S+L G+   KL+A+A+ V N    PFGG+Q+I +GDF QLPPVS+    G   + F    W E+ G      YEL +V RQ +   V++L ++R+G+ S  S ++L +        +GI  T L   N  VD +NQ+    L+G E  +F+ATD+ VE     L      +  +RL+ G QVML+KN    QGL NG++G +VGF  D+  LPIV+F  G+  +V PE+W +    +G      +R Q+PLKL WAM+IHKSQG+ L+ +E+ L  VFE GQAYVALSRA  L GL+V+ F     R  PRVI FY
Sbjct:  209 GTSVFFTGSAGTGKTFLLKRIVTILPPNSTFVTATTGIAATHIGGSTVHAFAGIGLGEASVSCLAEKVRKS-AAMANWRRCQHLIIDEISLLDGAYFEKLEAVARSVLNSD-KPFGGIQVILSGDFLQLPPVSK---TGQKKFVFQTKCWDEVIGR----IYELKEVHRQKDHQFVSILQEIRWGRCSDTSSKVLTDTVLNTVDGDGILATKLSTHNIDVDAVNQEFFRRLSG-EVKIFKATDS-VEGMKVFLDNHLPVQSVIRLKVGTQVMLVKNTKVAQGLANGSRGVVVGF--DKSGLPIVKFKKGLTTAVGPEKWTI----KGAGGASFSRNQIPLKLAWAMSIHKSQGLTLDAVEISLAKVFECGQAYVALSRASTLQGLKVLDFSASAVRADPRVIEFY 596          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: XP_023226142.1 (ATP-dependent DNA helicase PIF1-like isoform X1 [Centruroides sculpturatus])

HSP 1 Score: 313.2 bits (801), Expect = 2.200e-81
Identity = 173/418 (41.39%), Postives = 257/418 (61.48%), Query Frame = 0
Query:   28 GKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQ-LRKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFYDAQIKGKSRLET 445
            G+NV+++G AG+GKS+LL+ I+   P   T+ TASTG+AA  +GG TLHSFAGIG G   ++   ++A +  V    W+ C  LI+DE+SM+ G    KL+ IA+ V+N    PFGG+QLI +GDF QLPPV++G +     + F    W+           EL++V RQ +E  + +L D+R G+ +  +  +L +    +   +GI  T L    + V+ +N+ KL+SL GK   +F+A+D+  +P L + +   C    ++ L+EG+Q+ML KN++  +GLVNGA+G ++GF    E LPI++F  GV+Q+VA E W V+       +++    Q+PL LGWAM+IHKSQGM L+ +E+ L  VFE GQAYVALSRA  L GLRV+ F +   R +P V++FY       S LET
Sbjct:  196 GQNVFFTGSAGTGKSYLLKRIVGVLPPDTTFATASTGVAACQIGGITLHSFAGIGSGKADIQQCIQQALRKDVV-QQWRKCNHLIIDEISMIDGQFFQKLERIARIVRNN-QKPFGGIQLILSGDFLQLPPVTKGSE--KCTFCFQSEAWRNCI----NVSLELTQVMRQKDEKFIRILQDIRVGRCTEETTNILLQTADNIVENDGILATRLCTHKDDVEFINESKLKSLPGK-SRLFKASDS--DPMLSKYIDSHCPVGLQIELKEGSQIMLTKNMDLQKGLVNGARGVVIGFDQQREGLPIIKFLCGVKQTVAYERWLVKAPGGVHLIRR----QLPLMLGWAMSIHKSQGMTLDCVEISLGRVFESGQAYVALSRARNLEGLRVIDFDKSHVRANPVVLAFYRQLRYASSALET 598          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: XP_023226143.1 (ATP-dependent DNA helicase PIF1-like isoform X2 [Centruroides sculpturatus])

HSP 1 Score: 313.2 bits (801), Expect = 2.200e-81
Identity = 173/418 (41.39%), Postives = 257/418 (61.48%), Query Frame = 0
Query:   28 GKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQ-LRKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFYDAQIKGKSRLET 445
            G+NV+++G AG+GKS+LL+ I+   P   T+ TASTG+AA  +GG TLHSFAGIG G   ++   ++A +  V    W+ C  LI+DE+SM+ G    KL+ IA+ V+N    PFGG+QLI +GDF QLPPV++G +     + F    W+           EL++V RQ +E  + +L D+R G+ +  +  +L +    +   +GI  T L    + V+ +N+ KL+SL GK   +F+A+D+  +P L + +   C    ++ L+EG+Q+ML KN++  +GLVNGA+G ++GF    E LPI++F  GV+Q+VA E W V+       +++    Q+PL LGWAM+IHKSQGM L+ +E+ L  VFE GQAYVALSRA  L GLRV+ F +   R +P V++FY       S LET
Sbjct:  114 GQNVFFTGSAGTGKSYLLKRIVGVLPPDTTFATASTGVAACQIGGITLHSFAGIGSGKADIQQCIQQALRKDVV-QQWRKCNHLIIDEISMIDGQFFQKLERIARIVRNN-QKPFGGIQLILSGDFLQLPPVTKGSE--KCTFCFQSEAWRNCI----NVSLELTQVMRQKDEKFIRILQDIRVGRCTEETTNILLQTADNIVENDGILATRLCTHKDDVEFINESKLKSLPGK-SRLFKASDS--DPMLSKYIDSHCPVGLQIELKEGSQIMLTKNMDLQKGLVNGARGVVIGFDQQREGLPIIKFLCGVKQTVAYERWLVKAPGGVHLIRR----QLPLMLGWAMSIHKSQGMTLDCVEISLGRVFESGQAYVALSRARNLEGLRVIDFDKSHVRANPVVLAFYRQLRYASSALET 516          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: XP_013401768.1 (ATP-dependent DNA helicase PIF1 [Lingula anatina])

HSP 1 Score: 312.8 bits (800), Expect = 2.900e-81
Identity = 179/428 (41.82%), Postives = 260/428 (60.75%), Query Frame = 0
Query:    7 RPLP--FTHPTLSLTRLHTPSSQGKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQLRKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFY 433
            RPLP   T  T   T++      G++++++G AG+GKS+LLR II   P   TY TASTG+AA ++GGTTLHSFAGIG G  P+E   E A++  +A   W+ C  LI+DEVSM+ G   SKL+ +A+ +K     PFGG+QLI  GDF QLPPV++G++    ++ F    W +          EL +V RQ+++  V +L +VR G+      + L    + +   +GI+ T L    E V  +NQ  L+ L G E + ++++D+  +   G L   C    +L L+ GAQVMLLKN++  +GLVNGA+G + GF ++ + LP+V+F  GV  +V  E W V+ S      ++    Q+PL+L WA++IHKSQGM L+ +E+ L  VFE GQAYVALSRA  L GLRV+ F +D  R +P V++FY
Sbjct:  190 RPLPPQGTKLTADQTKVLRTVLGGRSIFFTGSAGTGKSYLLRRIIGALPPHHTYATASTGLAACHIGGTTLHSFAGIGSGKAPIEQCVELANRPVIA-KQWRQCNHLIIDEVSMVDGEFFSKLETVARVMKKSNE-PFGGIQLILCGDFLQLPPVTKGQE--KKNFCFQSRAWHKCISVN----MELRQVMRQSDKKFVEILQEVRQGRCPEFVEKTLHATSKHVLDKDGIQATRLCTHKEDVGHINQMHLDRLKG-EVYAYQSSDSD-QASQGLLNTLCPVGARLELKMGAQVMLLKNLDAQRGLVNGARGVVTGFNNEHQGLPVVKFIGGVETTVRFERWTVKASGGMHLTRR----QLPLQLAWAISIHKSQGMTLDCVEMSLSRVFESGQAYVALSRAKSLQGLRVLDFEKDCVRANPEVLTFY 603          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: XP_021380503.1 (ATP-dependent DNA helicase PIF1 [Lonchura striata domestica])

HSP 1 Score: 308.5 bits (789), Expect = 5.500e-80
Identity = 177/409 (43.28%), Postives = 252/409 (61.61%), Query Frame = 0
Query:   28 GKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCY---ELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQL-RKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFY 433
            GK+++++G AG+GKS LL+ I+   P   TY TASTG+AA ++GGTTLH+FAGIG G  P+E   + A +  V   +W AC+ LI+DE+SM+ G    KL+A+A+ V+ +   PFGG+QLI  GDF QLPPVS+  +  +  + F    W       R C +   EL++V RQ ++  V++L+ +R G+ +    R L +        +GI  T L    + VD  N+++L+ L G E HVFEA D+  +P L +L    C    ++ L+ GAQVML KN++  QGLVNGA+G +VGF  +++ LP V F  GV Q +  E+W +    +G +    +R Q+PLKL WA++IHKSQGM L+ +E+ L  VFE GQAYVALSRA  LAGLRV+ F     R  P V+ FY
Sbjct:  187 GKSIFFTGSAGTGKSFLLKRIVGSLPPNVTYPTASTGVAACHIGGTTLHAFAGIGSGKAPLEQCIQLAERPGVR-QHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRDE-PFGGIQLIICGDFLQLPPVSKANE--ETKFCFQAKCW-------RKCIHINMELTEVRRQTDKTFVSILSAIRLGRCTEEVTRQLMQTAAHKSERDGILATRLCTHKDDVDITNERRLQQLPG-EVHVFEALDS--DPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFESEQKGLPKVRFLCGVTQLIKMEKWVI----KGASGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLAGLRVLDFDPKAVRADPAVLQFY 577          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: XP_002188590.2 (PREDICTED: ATP-dependent DNA helicase PIF1 [Taeniopygia guttata])

HSP 1 Score: 308.1 bits (788), Expect = 7.200e-80
Identity = 177/409 (43.28%), Postives = 252/409 (61.61%), Query Frame = 0
Query:   28 GKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCY---ELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQL-RKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFY 433
            GK+++++G AG+GKS LL+ I+   P   TY TASTG+AA ++GGTTLH+FAGIG G  P+E   + A +  V   +W AC+ LI+DE+SM+ G    KL+A+A+ V+ +   PFGG+QLI  GDF QLPPVS+  +  +  + F    W       R C +   EL++V RQA++  V++L+ +R G+ +    R L +        +GI  T L    + VD  N+++L+ L G E HVFEA D+  +P L +L    C    ++ L+ GAQVML KN++  QGLVNGA+G +VGF  +++ LP V F  GV Q +  E+W +    +G +    +R Q+PLKL WA++IHKSQGM L+ +E+ L  VFE GQAYVALSRA  L GLRV+ F     R  P V+ FY
Sbjct:  318 GKSIFFTGSAGTGKSFLLKRIVGSLPPNVTYPTASTGVAACHIGGTTLHAFAGIGSGKAPLEQCIQLAERPGVR-QHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRDE-PFGGIQLIICGDFLQLPPVSKANE--ETKFCFQAKCW-------RKCIHINMELTEVRRQADKTFVSILSAIRLGRCTEEVTRQLMQTAAHKSERDGILATRLCTHKDDVDMTNERRLQQLPG-EVHVFEALDS--DPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDLSQGLVNGARGVVVGFESEQKGLPKVRFLCGVTQLIKMEKWVI----KGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLEGLRVLDFDPKAVRADPAVLQFY 708          
BLAST of NO04G03620 vs. NCBI_GenBank
Match: XP_005050364.1 (PREDICTED: ATP-dependent DNA helicase PIF1, partial [Ficedula albicollis])

HSP 1 Score: 307.4 bits (786), Expect = 1.200e-79
Identity = 178/409 (43.52%), Postives = 252/409 (61.61%), Query Frame = 0
Query:   28 GKNVYYSGRAGSGKSHLLRAIIERAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCY---ELSKVFRQAEEPLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLESLAGKEEHVFEATDTGVEPFLGQL-RKSCLAEQKLRLREGAQVMLLKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAIKLAGLRVVAFRQDRFRVSPRVISFY 433
            GK+V+++G AG+GKS LL+ I+   P   TY TASTG+AA ++GGTTLH+FAGIG G  P+E   + A +  V   +W AC+ LI+DE+SM+ G    KL+A+A+ V+ +   PFGG+QLI  GDF QLPPV +  +  +  + F    W       R C +   EL++V RQ ++  V+LL+ +R G+ +    RLL +        +GI  T L    + V+  N+++L+ L G E HVFEA D+  +P L +L    C    ++ L+ GAQVML KN++  QGLVNGA+G +VGF  +++ LP V F  GV Q +  E+W +    +G +    +R Q+PLKL WA++IHKSQGM L+ +E+ L  VFE GQAYVALSRA  LAGLRV+ F     R  P V+ FY
Sbjct:   11 GKSVFFTGSAGTGKSFLLKRIVGSLPPNITYATASTGVAACHIGGTTLHAFAGIGSGKAPLEQCIQLAERPGVR-QHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRDE-PFGGIQLIICGDFLQLPPVCKANE--ETKFCFQAKSW-------RKCIHINMELTEVRRQTDKTFVSLLSAIRLGRCTEEVTRLLMQTAAHRSERDGILATRLCTHKDDVEITNERRLQQLPG-EVHVFEALDS--DPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFESEQKGLPKVRFLCGVTQLIKMEKWVI----KGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLAGLRVLDFDPKVVRADPAVLQFY 401          
The following BLAST results are available for this feature:
BLAST of NO04G03620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28750.12.100e-21276.51atp-dependent dna helicase pif1 [Nannochloropsis g... [more]
XP_020895815.12.400e-8343.61uncharacterized protein LOC110234765 [Exaiptasia p... [more]
OAO14610.11.300e-8142.86DNA helicase PIF1 [Blastocystis sp. ATCC 50177/Nan... [more]
OQR75204.12.200e-8144.20ATP-dependent DNA helicase PIF1-like [Tropilaelaps... [more]
XP_023226142.12.200e-8141.39ATP-dependent DNA helicase PIF1-like isoform X1 [C... [more]
XP_023226143.12.200e-8141.39ATP-dependent DNA helicase PIF1-like isoform X2 [C... [more]
XP_013401768.12.900e-8141.82ATP-dependent DNA helicase PIF1 [Lingula anatina][more]
XP_021380503.15.500e-8043.28ATP-dependent DNA helicase PIF1 [Lonchura striata ... [more]
XP_002188590.27.200e-8043.28PREDICTED: ATP-dependent DNA helicase PIF1 [Taenio... [more]
XP_005050364.11.200e-7943.52PREDICTED: ATP-dependent DNA helicase PIF1, partia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009442NSK009442Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03620.1NO04G03620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO04G03620.2NO04G03620.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|294977gene_2143Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g91gene1841Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03620.1NO04G03620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO04G03620.2NO04G03620.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03620 ID=NO04G03620|Name=NO04G03620|organism=Nannochloropsis oceanica|type=gene|length=3664bp
AGGCGTATTCGACGCCCGCCACAACGGCCATGAACGGCAATTATGTCATC
GACCTCAGCTGGGAAGACGACGGTATGTACGCTGAAGAGGAGGACGAGGA
GGAGCGGTACTTGAGGGAATCCGGATACTTGGACGAACCTTCTATCGCAC
CTTCTCCCTCCAAGCCCCAAGCAAACGTAGCCTCTGTCTCCGCCTCAGCC
TCGAAACCAATAGCCAAGAAAGCGGGCCTGAAACGGGCACTTGAGGACAA
CAGGGAAGAGGAGGAGAAAGAGAGAGATGTAACCTCCACCGCCTCATTGG
GAGAGGTCAGTGAGGCCGCGGCGGAGAAGATAAAGCCAAGTGGGGAACTG
TCGGAGGAGCAGAAGGGCATCCTCCGGTCCGTGATGGAGgtatgtcttgc
agctcgtcgccatgatcggtcattgcttgtggtgtttgaccttttaaaag
tcaatcatgacgctgcagcttcgtcggcctcttccattcacacaccccac
tctctccctcactcgcctacataccccgtcttcacagGGCAAGAACGTGT
ATTACAGTGGGCGTGCCGGCTCCGGTAAAAGTCACCTGCTACGCGCCATT
ATTGAACGAGCGCCAGCAGGAAAGACTTATGTCACGGCCTCCACGGGCAT
TGCTGCAATCAATGTTGGTGgtacgtgagtagtctaccacccctccttcc
ctccttccctcattcccaccctacctttcagttaccactgtcttctccca
atttgctggtgctcggcattaagatccctttttaacctttttttaaaaaa
ttggattcggatcgaattttctcttttttcatcctaccttcccttttctt
atcctgcgtttccttacttattgcctcatcttttttgcgctctctccttt
gaacgagtctgatgcaacctgtttctccctccctctcccctccttcctcc
ctccagGGACCACCCTCCATTCCTTTGCGGGCATCGGCCTCGGCGACGAT
CCCGTGGAGGTTCTGAAAGAGCGCGCCAGCAAGAGCAGGGTGGCGGGGGC
GAACTGGCAAGCGTGTGAGGTGCTGATAGTGGACGAGgtgagagggaggg
agggagaaagggagggagggagggagattggggtgcaattatatctcaca
accacctcctgtcctacactgtgctgcatccctccttaacagGTGAGTAT
GCTCCACGGCTCGCTCCTCAGCAAGCTGGACGCCATCGCCAAGCACGTCA
AAAACCAACCCTACCTCCCCTTTGGTGGCGTGCAACTGATATTCACCGGC
GATTTCTTCCAGCTCCCGCCCGTGAGCCGGGGCCGGCAGGGTGGGGACCA
CGACTATGCGTTTCTGCACCCCGTGTGGCAAGAGCTTTTTGGTCCGGGGA
GGGGTTGTTGTTATGAGCTGTCGAAAGTGTTTAGGCAGGCGGAGGAACCA
TTGGTGGCGTTGCTGAACGACGTGAGATACGGGAAGGCGTCGGCGGGGAG
TCTGAGGCTGTTGAGGGAACTGGGGAGGGAGCTTCAGCCACCGGAGGGGA
TAGAACCCACGTTGCTTTTTGCCACCAACGAGCGGGTGGATCGCATGAAC
CAGAAGAAGTTGGAGTCGCTGGCTGGCAAGGAGGAGCACGTCTTCGAGGC
CACGGACACGGGGGTAGAGCCCTTCTTGGGGCAATTGCGCAAGAGCTGTC
TGGCTGAGCAGAAGgtgagaagtcgcgggcctttgcctccacagcacatt
gaattctttttctcttctaccacccatctcttccttcctctccttcctcc
ctccctcccttctccttcctcctcttccttcctcccgcagTTGCGGTTAC
GGGAAGGGGCACAGGTGATGTTGTTGAAGAACATTAATCCGGGCCAGGGG
TTGGTGAACGGCGCCAAAGGCCGTCTGGTGGGCTTCACGCACGATGAAGA
GCATCTACCCATCGTCGAGTTTGCGTCGGGGGTGCGACAAAGCGTGGCGC
CGGAGGAGTGGGCCGTGGAGACCAGTGAGAGAGGGCGCACAGTGAAGAAG
GCAGCCAGGGTGCAGGTGCCCCTAAAGCTGGGGTGGGCCATGACGATCCA
CAAGAGTCAAGGGATGGGTTTGGAGTGGCTTGAGGTGAAGCTGGATGACG
TGTTCGAGGAGGGACAGGCGTACGTGGCCTTGTCGCGAGCGATCAAACTG
GCGGGATTGCGGGTGGTGGCGTTTCGGCAGgtttgtcaagtgtccttccc
cccttcccccctcctttgcttgcccctcaaggtttcttcccaaggtactt
tactttctcccttgtctcgtctcctccaccctacctccctctctacctcc
tcagGACCGATTCCGCGTCTCCCCCCGCGTCATCTCCTTCTACGACGCCC
AGATCAAGGGAAAGTCCCGCCTGGAGACCACCGACGAAAGCAGCTGGCTC
CCAACCCTCGCGCCCAACTGGCGGCCAGAACATGCGAAATACAAGGAGAA
GGATCCAGCCGCTGCTACTGCTGCTGCTGCTGCTTACCATGGCGGTGGAG
GGGGTGAAGGAGGGTGGAGCGGGAAAAGGGATGGACCATACTCGTCGTGG
AAGTCGGGGAGTGTGACTCTCTTGAATAAAAGGAATGGGGCAGGAGGAGG
AGGTGAATGGATGTCACGGAGGAATTACTTGGGCGTCTCCTCCTTACCTC
CTCCTTCCCAGCCCCCTCTTTCCTTTCCTTCTTCATCAGCTTGTACATTC
TCAGAGAGAGGAGCAAGAGGAGGCAGAGAAAAAGAAGGAGGAGGACCAGG
CGCAGAAGGAGGAGGAATAGCAGCAGCAGCAATCCCACCATACCGGCCCA
ACGCCACGCCCCATGCCTCGACAGTCCGAGGGCCCTATCGCCCGCAACGG
TACCAGCAGGACCAACCACAACAGCAGCAGCAGCAGCAACAGCAGCAACA
GCAGCAACAACATCAGCAGCAACAACCACCACCATCAGCCCCACGCCAGG
TTTTTGCTTCCGGAAGCGGAGGTGGCCATGGAGGCAGTAGTGGGAGATGG
GGGAGCAGCAGCAGCAGCAGCAACAGCAACAACAACAGCAGAAGCAGCAA
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAAC
AGCAGCAGCAGCAGCGGGGGGGTGAATAGTGGTTGGGATAAGTATGAGAA
GAAGAAGGGGGTCCCGGCCTATACTTCGCGGCCGGGGGGACAACAAAGCA
TTTACGGCTTTTTCGGAAAGAAAATGTAATGAAGAGGAAGAGGAAGAGGG
GGAAGAGGATGGGACAGAGGTGGAGAAATGAGGACATGAGGAGGAAAAAT
TACCCGCGCGCTCTTTTGTGAATGGGTGATGGCGTTTTCCCAAAAGGGTG
GATGAGAATTAAAATGCACGCAAGGTGCTTGAGTTTACGTGCACATTTAT
GAATGCAACTGCGAGAGAGCAAGCGAAGGCGCCGACTGGGCGTCCACTGC
TTAGCAAATCATGACATGGGGAGAGAAATGGAGGCCTCCACAGGGCATCA
AACGAGGAGGAAGACCTGTGGTTGCACGCTTTACTATGACAGCCCACATC
CAATCAGAATCAGT
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protein sequence of NO04G03620.1

>NO04G03620.1-protein ID=NO04G03620.1-protein|Name=NO04G03620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MTLQLRRPLPFTHPTLSLTRLHTPSSQGKNVYYSGRAGSGKSHLLRAIIE
RAPAGKTYVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRV
AGANWQACEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFT
GDFFQLPPVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEE
PLVALLNDVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRM
NQKKLESLAGKEEHVFEATDTGVEPFLGQLRKSCLAEQKLRLREGAQVML
LKNINPGQGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVET
SERGRTVKKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAY
VALSRAIKLAGLRVVAFRQDRFRVSPRVISFYDAQIKGKSRLETTDESSW
LPTLAPNWRPEHAKYKEKDPAAATAAAAAYHGGGGGEGGWSGKRDGPYSS
WKSGSVTLLNKRNGAGGGGEWMSRRNYLGVSSLPPPSQPPLSFPSSSACT
FSERGARGGREKEGGGPGAEGGGIAAAAIPPYRPNATPHASTVRGPYRPQ
RYQQDQPQQQQQQQQQQQQQQHQQQQPPPSAPRQVFASGSGGGHGGSSGR
WGSSSSSSNSNNNSRSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSN
NSSSSSGGVNSGWDKYEKKKGVPAYTSRPGGQQSIYGFFGKKM*
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protein sequence of NO04G03620.2

>NO04G03620.2-protein ID=NO04G03620.2-protein|Name=NO04G03620.2|organism=Nannochloropsis oceanica|type=polypeptide|length=837bp
MNGNYVIDLSWEDDGMYAEEEDEEERYLRESGYLDEPSIAPSPSKPQANV
ASVSASASKPIAKKAGLKRALEDNREEEEKERDVTSTASLGEVSEAAAEK
IKPSGELSEEQKGILRSVMEGKNVYYSGRAGSGKSHLLRAIIERAPAGKT
YVTASTGIAAINVGGTTLHSFAGIGLGDDPVEVLKERASKSRVAGANWQA
CEVLIVDEVSMLHGSLLSKLDAIAKHVKNQPYLPFGGVQLIFTGDFFQLP
PVSRGRQGGDHDYAFLHPVWQELFGPGRGCCYELSKVFRQAEEPLVALLN
DVRYGKASAGSLRLLRELGRELQPPEGIEPTLLFATNERVDRMNQKKLES
LAGKEEHVFEATDTGVEPFLGQLRKSCLAEQKLRLREGAQVMLLKNINPG
QGLVNGAKGRLVGFTHDEEHLPIVEFASGVRQSVAPEEWAVETSERGRTV
KKAARVQVPLKLGWAMTIHKSQGMGLEWLEVKLDDVFEEGQAYVALSRAI
KLAGLRVVAFRQDRFRVSPRVISFYDAQIKGKSRLETTDESSWLPTLAPN
WRPEHAKYKEKDPAAATAAAAAYHGGGGGEGGWSGKRDGPYSSWKSGSVT
LLNKRNGAGGGGEWMSRRNYLGVSSLPPPSQPPLSFPSSSACTFSERGAR
GGREKEGGGPGAEGGGIAAAAIPPYRPNATPHASTVRGPYRPQRYQQDQP
QQQQQQQQQQQQQQHQQQQPPPSAPRQVFASGSGGGHGGSSGRWGSSSSS
SNSNNNSRSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNNSSSSSG
GVNSGWDKYEKKKGVPAYTSRPGGQQSIYGFFGKKM*
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Synonyms
Publications