NO04G01980, NO04G01980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01980 vs. NCBI_GenBank
Match: EWM28615.1 (protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 416.4 bits (1069), Expect = 6.700e-113 Identity = 196/255 (76.86%), Postives = 221/255 (86.67%), Query Frame = 0 Query: 10 LVPTFVLAFIILTQAFLLPIPDTTSALTFRQAIASSTPAP--PRPPLPDNFYAETLLDKVALALFRRLVQQQIGFVSTKPGYDGLIEEARHFQLQPGVTAEDQQRMVKSCLTTIAGPLVPPIYRTFMAPWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGCGAVAALQQQKLDRVTVC 263 +V V+A + AFLLP P + + R +S P+P PRPPLPDNFYAE+LLDKVALALFRRLVQ++IG+VS+KPGYDGLIEEARH+QLQPGVTAEDQQ+MVK+CL TIAGPLVPP+YRTFMAPWFWAPFLTAIFTP FFKFLVGPN+YDVRDDG GGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDM M+P+Y+TYECRLSFG+ PK VE+D SIPKGCL GC AV ALQ+++LDR TVC Sbjct: 8 MVAVCVMATSTICAAFLLPSPSPRAITSCRMGAMTSNPSPVQPRPPLPDNFYAESLLDKVALALFRRLVQREIGYVSSKPGYDGLIEEARHYQLQPGVTAEDQQKMVKTCLATIAGPLVPPVYRTFMAPWFWAPFLTAIFTPPFFKFLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCSAVTALQEKRLDRGTVC 262
BLAST of NO04G01980 vs. NCBI_GenBank
Match: CBJ33737.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 295.0 bits (754), Expect = 2.300e-76 Identity = 138/215 (64.19%), Postives = 168/215 (78.14%), Query Frame = 0 Query: 41 AIASSTPAPPRPPLPDNFYAETLLDKVALALFRRLVQQQIGFVSTKPGYDGLIEEARHFQLQPGVTAEDQQRMVKSCLTTIAGPLVPPIYRTFMAPWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGC-----GAVAA 251 AIA A RPPL +FY+E+LLDKVALALFR LVQ++IG+ S +PGY GLI+EA+++ + G + EDQQ MV LTTIAGP VPP+Y+ FMAPW WAPFLTA FTP FFKFLVGPNK D R D PGGV+ ERCRFLEETNCKGLC +MCK+PT++FF+ETLGL M M P+++TYECRLSFG+ +EED+++P+GCL GC GAV A Sbjct: 79 AIAQEGVAQLRPPLAADFYSESLLDKVALALFRVLVQKEIGYKSEEPGYAGLIDEAQNYMVIQGASVEDQQDMVVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTAFFTPPFFKFLVGPNKLDARKDDTPGGVFVERCRFLEETNCKGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCSCKELGAVVA 293
BLAST of NO04G01980 vs. NCBI_GenBank
Match: CBJ33899.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 288.5 bits (737), Expect = 2.100e-74 Identity = 132/205 (64.39%), Postives = 162/205 (79.02%), Query Frame = 0 Query: 51 RPPLPDNFYAETLLDKVALALFRRLVQQQIGFVSTKPGYDGLIEEARHFQLQPGVTAEDQQRMVKSCLTTIAGPLVPPIYRTFMAPWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGC-----GAVAA 251 RPPL +F +E+LLDKVALALFR LVQ++IG+ S +PGY GLI+EA+++ + G + EDQQ M LTTIAGP VPP+Y+ FMAPW WAPFLTA FTP FFKFLVGPNK D R D PGGV+ ERCRFLEETNCKGLC +MCK+PT++FF+ETLGL M M P+++TYECRLSFG+ +EED+++P+GCL GC GAV A Sbjct: 10 RPPLAADFCSESLLDKVALALFRVLVQKEIGYKSEEPGYAGLIDEAQNYMVIQGASVEDQQDMAVRVLTTIAGPAVPPVYKLFMAPWPWAPFLTAFFTPPFFKFLVGPNKLDARKDDTPGGVFVERCRFLEETNCKGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCSCKELGAVVA 214
BLAST of NO04G01980 vs. NCBI_GenBank
Match: CEL96006.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 233.0 bits (593), Expect = 1.100e-57 Identity = 111/226 (49.12%), Postives = 146/226 (64.60%), Query Frame = 0 Query: 47 PAPPRPPLP-------DNFYAETLLDKVALALFRRLVQQQIGFVSTKPGYDGLIEEARHFQLQPGVTAEDQQRMVKSCLTTIAGPLVPPIYRTFMAPWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGCGAVAALQQQKLDRVTVCDGK 266 P+ P LP D FYA +++AL LFR VQ+QIG+ S GYDGLI+EA+HF L T Q+ MV + L +++GPL+P +RTF+APW + P +T+I TP FLVGP + + R+DG GGV +RCRFL T CKGLCL+MCK P Q +F++ LGLDM M PN+ T EC+LSFG+ P P+EED S+P CL CG + L Q+ DR +C K Sbjct: 80 PSLPLSKLPHADAVDEDAFYAMNAWERMALGLFREQVQRQIGYASPMEGYDGLIDEAKHFMLVQNATTSLQEAMVLNVLRSLSGPLLPIFFRTFVAPWPYGPLMTSIVTPLLLSFLVGPVEVNRREDGRLGGVLVKRCRFLAATKCKGLCLNMCKSPAQTYFRDVLGLDMTMRPNFATCECQLSFGLAPPPIEEDVSVPSDCLGQCGWKSQLMQRPGDREMICSRK 305
BLAST of NO04G01980 vs. NCBI_GenBank
Match: GAX11909.1 (hypothetical protein FisN_17Lh183 [Fistulifera solaris]) HSP 1 Score: 219.5 bits (558), Expect = 1.200e-53 Identity = 106/217 (48.85%), Postives = 141/217 (64.98%), Query Frame = 0 Query: 54 LPDNFYAETLLDKVALALFRRLVQQQIGFV-STKPGYDGLIEEARHFQLQPGVTAEDQQRMVKSCLTTIAGPLVPPIYRTFMA----------------PWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGCGAVAALQQ 254 L D Y E+ LD+ L LFR V++ G V STK G GL+E+ + F LQ G TAE Q +MVKS L + P++PP YR FM+ PWF+AP+LT+ TPTFF FLVGP++ ++R DG GG+ E+C+FL+E+ CKGLCLH CK+P Q+FF++ LGL + +SPN+ T EC+ SFG P PV+ED + P GCL GC + AL Q Sbjct: 232 LEDMVYTESALDQFLLWLFRNFVEKNTGGVSSTKAGIQGLLEQGQKFMLQEGQTAESQHKMVKSTLGDLMTPVLPPFYRIFMSGIVPKLGNDMDGKQLGPWFYAPWLTSFVTPTFFGFLVGPSRPNLRKDGQLGGLIVEKCKFLQESGCKGLCLHQCKIPAQEFFQQELGLPLTVSPNFVTQECQWSFGETPLPVQEDPTFPAGCLAGCKSRDALVQ 448
BLAST of NO04G01980 vs. NCBI_GenBank
Match: XP_005828489.1 (hypothetical protein GUITHDRAFT_164374 [Guillardia theta CCMP2712] >EKX41509.1 hypothetical protein GUITHDRAFT_164374 [Guillardia theta CCMP2712]) HSP 1 Score: 212.6 bits (540), Expect = 1.500e-51 Identity = 103/221 (46.61%), Postives = 141/221 (63.80%), Query Frame = 0 Query: 50 PRPPLPDNFYAETLLDKVALALFRRLVQQQIGFVSTKPGYDGLIEEARHFQLQPGVTAEDQQRMVKSCLTTIAGPLVPPIYRTFMA---------PWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGCGAVAALQQQKLDRVTV 262 P LP+ Y E+ LDKV L++FR LV ++ GF S K G GL+E+ R + L+PG TAE Q RMV + L + P++PP Y+ FM+ PW WA +LT+ TPTFF FLVGP++ + R DG GG+ E+C+FL+E+ CK LC++ CKLP QQFF + LGL + ++PN+ET EC+ SFG P V++D IP+GCL C AL + R V Sbjct: 178 PSCSLPNVTYTESPLDKVLLSIFRSLVAKETGFQSEKEGILGLLEQGREYLLRPGQTAEAQNRMVYNTLAGLLTPVMPPFYKVFMSGIIAGKQYGPWPWAAWLTSFVTPTFFGFLVGPSRPNRRKDGQLGGLVVEKCKFLQESGCKSLCINQCKLPAQQFFSQELGLPLTVTPNFETQECQWSFGEHPIDVDKDPRIPRGCLSECPTREALVSMRESRSCV 398
BLAST of NO04G01980 vs. NCBI_GenBank
Match: XP_002180091.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48282.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 206.5 bits (524), Expect = 1.100e-49 Identity = 100/209 (47.85%), Postives = 133/209 (63.64%), Query Frame = 0 Query: 54 LPDNFYAETLLDKVALALFRRLVQQQIGFV-STKPGYDGLIEEARHFQLQPGVTAEDQQRMVKSCLTTIAGPLVPPIYRTFMA----------------PWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGC 246 + D Y E+ LDK+ L++FR LV + G V S K G GL+++ R F L+PG T E Q +MV L + P++PP Y FM+ PWF+AP+LT++ TPTFF FLVGP++ + R DG GG+ E+C+FL+++ CKGLCLH CKLP QQFFK+ LGL + +SPN+ T EC+ SFG P P ED S P GCL GC Sbjct: 226 IEDMKYNESPLDKLLLSIFRNLVTKNTGGVTSPKEGILGLVDQGRTFMLKPGQTPEAQHKMVSDTLAGLMTPVLPPFYGIFMSGIVPKIGTEFDGKQFGPWFYAPWLTSVVTPTFFGFLVGPSRPNHRKDGQLGGLVVEKCKFLQKSGCKGLCLHQCKLPAQQFFKDELGLPLTVSPNFVTQECQWSFGESPLPASEDPSFPTGCLVGC 434
BLAST of NO04G01980 vs. NCBI_GenBank
Match: XP_002295256.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87560.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 203.8 bits (517), Expect = 6.800e-49 Identity = 103/220 (46.82%), Postives = 138/220 (62.73%), Query Frame = 0 Query: 50 PRPPLPDNFYAETLLDKVALALFRRLVQQQIGFV-STKPGYDGLIEEARHF---QLQPGVTAED----QQRMVKSCLTTIAGPLVPPIYRTFMA----------------PWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGC 246 P L D Y ++ LDKV L++FR+LV + G + + PG GL+ + R F +L GV+ ED Q MVK+ L + P++PP YR FM+ PWF+APFLT++ TP FF FLVGP++ + R DG GG+ E+C+FL+E+ CKGLCLH CK+P Q+FFKE LGLD+ + PN+ T EC+ SFG P P EED S P+GCL GC Sbjct: 220 PDCELDDMTYNDSSLDKVLLSIFRKLVAENTGGIQNDTPGIKGLLIQGRQFMTKELPEGVSYEDHTIAQHTMVKNTLGGLMTPVLPPFYRIFMSGIVPKLGTEFDGKQLGPWFYAPFLTSMVTPIFFGFLVGPSRPNRRADGQRGGLVVEKCKFLQESGCKGLCLHQCKIPAQEFFKEELGLDLTVKPNFVTQECQWSFGETPLPPEEDPSFPRGCLVGC 439
BLAST of NO04G01980 vs. NCBI_GenBank
Match: EJK64149.1 (hypothetical protein THAOC_15145, partial [Thalassiosira oceanica]) HSP 1 Score: 196.4 bits (498), Expect = 1.100e-46 Identity = 98/226 (43.36%), Postives = 138/226 (61.06%), Query Frame = 0 Query: 54 LPDNFYAETLLDKVALALFRRLVQQQIGFVSTK-PGYDGLIEEARHF---QLQPGVT----AEDQQRMVKSCLTTIAGPLVPPIYRTFMA----------------PWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGCGAVAALQQQK 256 L D ++E+ LDK+ L++FR V + G V++ PG GL+ + R + +L GVT +++Q MVK L + P++PP YR FM+ PWF+AP+LT I TP FF FLVGP++ + R DG GG+ E+C+FL+E+ CKGLCLH CK+P Q FF+E LGLD+ + PN+ T EC+ SFG P +ED S P GCL GC + A+ +K Sbjct: 267 LEDMKFSESPLDKILLSIFRSQVTENTGGVTSDIPGIKGLLAQGREYMTKELPEGVTYAEHSKEQNTMVKKTLAALMTPVLPPFYRIFMSGIVPKLGTEWDGKQIGPWFYAPWLTTIVTPIFFGFLVGPSRPNRRSDGQRGGLVVEKCKFLQESGCKGLCLHQCKIPAQDFFREELGLDLTVKPNFVTQECQWSFGEKPLTPDEDPSFPNGCLVGCESRKAMADRK 492
BLAST of NO04G01980 vs. NCBI_GenBank
Match: GAX13246.1 (hypothetical protein FisN_17Hh183 [Fistulifera solaris]) HSP 1 Score: 176.8 bits (447), Expect = 9.000e-41 Identity = 82/164 (50.00%), Postives = 108/164 (65.85%), Query Frame = 0 Query: 106 TAEDQQRMVKSCLTTIAGPLVPPIYRTFMA----------------PWFWAPFLTAIFTPTFFKFLVGPNKYDVRDDGAPGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMVMSPNYETYECRLSFGMVPKPVEEDESIPKGCLQGCGAVAALQQ 254 TAE Q MVKS L + P++PP YR FM+ PWF+AP+LT+ TPTFF FLVGP++ ++R DG GG+ E+C+FL+E+ CKGLCLH CK+P Q+FF++ LGL + +SPN+ T EC+ SFG P PV ED + P GCL GC + AL Q Sbjct: 246 TAEAQHTMVKSTLGNLMTPVLPPFYRIFMSGFVPKLGTDMDGKQLGPWFYAPWLTSFVTPTFFGFLVGPSRPNLRKDGQLGGLIVEKCKFLQESGCKGLCLHQCKIPAQEFFQQELGLPLTVSPNFVTQECQWSFGETPLPVNEDPTFPAGCLAGCKSRDALVQ 409 The following BLAST results are available for this feature:
BLAST of NO04G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01980 ID=NO04G01980|Name=NO04G01980|organism=Nannochloropsis oceanica|type=gene|length=798bpback to top protein sequence of NO04G01980.1 >NO04G01980.1-protein ID=NO04G01980.1-protein|Name=NO04G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=266bpback to top Synonyms
Publications
|