NO04G01470, NO04G01470 (gene) Nannochloropsis oceanica

Overview
NameNO04G01470
Unique NameNO04G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1386
Alignment locationchr4:457186..458571 +

Link to JBrowse

Properties
Property NameValue
DescriptionTRPL translocation defect protein 14
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:457186..458571 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR038727NadR/Ttd14_AAA_dom
Homology
BLAST of NO04G01470 vs. NCBI_GenBank
Match: XP_005856067.1 (hypothetical protein NGA_2017900, partial [Nannochloropsis gaditana CCMP526] >EKU20288.1 hypothetical protein NGA_2017900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 682.9 bits (1761), Expect = 6.700e-193
Identity = 325/385 (84.42%), Postives = 361/385 (93.77%), Query Frame = 0
Query:   70 SDGHPRLIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSD-KQEFGHDLFTLRRQAEGGTPEFPPFLDVGEHIEDEDGLFPFPTRPAPS 454
            SDG PRLIKIVLTGGPCGGKTT+LARLSEFFRTHGFRVFTVPEAAT LWSNGVAL+D+L S ETQYWFQD VL+FQ+HLE+G+E+IARSL +P+VILCDRGTLDGAAYV+K++WE L+K+KGLELLSIREGRYDA+FHLVTAA GAE +YSL+NN TRTESPEFAREVD+KTQGVWNGHP+H+VIDNSTDFEGKLARVQ++AARLVGLPQLPRGADRW+LR+   P  FTVP+EKTQVRKVYL+NVG+ LPDGR VSVEYNYVEERSQDGSVAYAHTSKQRLDDG+EAELKRIID REF+ R+TTMADPSRKEVFQTRYSFLWAQQAFVVI HHSD K +FG +LFTLRRQA+GG PEFPPFLDVGEHIEDEDGLFPFPTRP+P+
Sbjct:   88 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPT 472          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: EWM28608.1 (hypothetical protein Naga_100009g31 [Nannochloropsis gaditana])

HSP 1 Score: 677.9 bits (1748), Expect = 2.200e-191
Identity = 323/385 (83.90%), Postives = 359/385 (93.25%), Query Frame = 0
Query:   70 SDGHPRLIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSD-KQEFGHDLFTLRRQAEGGTPEFPPFLDVGEHIEDEDGLFPFPTRPAPS 454
            SDG PRLIKIVLTGGPCGGKTT+LARLSEFFRTHGFRVFTVPEAAT LWSNGVAL+D+L S ETQYWFQD VL+FQ+HLE+G+E+IARSL +P+VILCDRGTLDGAAYV+K++WE L+K+KGLELLSIREGRYDA+FHLVTAA GAE +YSL+ N TRTESP FAREVD+KTQGVWNGHP+H+VIDNSTDFEGKLARVQ++AARLVGLPQLPRGADRW+LR+   P  FTVP+EKTQVRKVYL+NVG+ LPDGR VSVEYNYVEERSQDGSVAYAHTSKQRLDDG+EAELKRIID REF+ R+TTMADPSRKEVFQTRYSFLWAQQAFVVI HHSD K +FG +LFTLRRQA+GG PEFPPFLDVGEHIEDEDGLFPFPTRP+P+
Sbjct:   49 SDGRPRLIKIVLTGGPCGGKTTSLARLSEFFRTHGFRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLTNVTRTESPGFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKPKPDSFTVPFEKTQVRKVYLMNVGRPLPDGRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGEHIEDEDGLFPFPTRPSPT 433          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: CBJ25676.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 275.0 bits (702), Expect = 4.200e-70
Identity = 164/417 (39.33%), Postives = 233/417 (55.88%), Query Frame = 0
Query:   70 SDGHPRLIKIVLTGGPCGGKTTALARLSEFFRTHG---------------------FRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDP-ACFTVPYEKTQVRKVYLV-------------------NVGKALPDG-RNVSV-------EYNYVEERSQDGS--VAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSDKQEFGHDLFTLRRQAEGGTPEFPPFLDVGE 436
            +   P  ++IVLTGGPC GKTTA  RL + FR  G                     FRVFTVPEAAT +++NGV   D L  +  ++ FQ ++L  QM+LE+G E+ AR+  +P+++LCDRG +DG+ Y+  + W++L++  G++  S+R+GRYD +FHLVTAA GAE +YSL NN+ R+ES E AR+VD +T+GVW GHP+H V DNSTDFE K++R+ + A+RLVGLP  PR   ++ L  P  P   F VP  +    KV+LV                   + G A  +G  NV V         +++E+R +  S    Y+ T+     DG   E+ R +            ADP+R +V Q R SFLW +Q F +  H   +  FG  +  L R++EGG    P FL V +
Sbjct:   12 TQAEPDHLEIVLTGGPCAGKTTAATRLRDTFRAKGTIHGEEDARIKRFVCGKISTRFRVFTVPEAATSMFTNGVGFQD-LGEKAKRFAFQWSILSLQMNLEDGFERFARACGEPSILLCDRGLMDGSVYMPPEEWDSLVEGNGMDERSLRDGRYDGIFHLVTAACGAEEHYSLENNQARSESVEMARDVDGRTEGVWLGHPRHVVFDNSTDFEAKMSRITSAASRLVGLPCRPRKLCKFLLFEPPPPLEEFPVPVREFHAEKVFLVKRDTAEAGESGLMTVPAETSGGDADGEGDANVDVPAAVCVSSESFLEKRGKTKSEVFVYSITTISTFSDGTVTEVTRHLSAARHASIEKERADPARPKVVQRRVSFLWERQVFEL--HTDMEPTFG--INVLHRRSEGGELSLPTFLKVDD 423          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: GAX22696.1 (hypothetical protein FisN_4Hh192 [Fistulifera solaris])

HSP 1 Score: 270.4 bits (690), Expect = 1.000e-68
Identity = 162/384 (42.19%), Postives = 231/384 (60.16%), Query Frame = 0
Query:   70 SDGHPRLIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLP-QLPRGADRWYLRRPHDPACF--TVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQ---DG---SVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSDKQEFGHDLFTLRRQAEG-GTPE--FPPFLDVGEHIEDED 442
            +DG P + + V TGGPCGGKTTALAR+  + R  GF   T PEA T L SNG+ + D  +++      Q TVLE QM LE+G+ ++ ++  KP V+LCDRGT+DG+ Y+ +  +  LL      ++ IR+ RYDA+FHL+TAA GAE +Y+L NN+ RTE+ E AREVD KTQ  W GHP  + IDNSTDFEGK++R+ +  +++VGLP  L R + ++ L+   D + F   + Y++ +V K+YL    K + D ++    Y+++  R+    DG      Y  T  Q  +DG   E KRII ERE+   + T  D SR  V Q R SFL+ +Q+FVV    S K+  G  +   + +A G   PE   PPFL+V   ++D D
Sbjct:   12 TDG-PPIFRFVFTGGPCGGKTTALARVFSYLRERGFECITCPEAYTTLSSNGMNV-DFFSTQGMPKVIQRTVLEVQMALEDGIHRVLKARGKPGVMLCDRGTMDGSVYMPQKEFSELLSEMDTNIVQIRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLLKSKPDLSKFPSDIAYKEFEVEKIYL----KHIHDDKS---SYSFIRRRTNIDPDGRRLGSVYQSTLAQWTEDGELIEQKRIISEREYMSTSAT-RDTSRHVVQQRRISFLYNKQSFVVHIFQSPKE--GLCILHAQVEASGKAEPEVDLPPFLEVDRRLQDTD 383          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: GAX19223.1 (hypothetical protein FisN_4Lh192 [Fistulifera solaris])

HSP 1 Score: 270.4 bits (690), Expect = 1.000e-68
Identity = 162/384 (42.19%), Postives = 231/384 (60.16%), Query Frame = 0
Query:   70 SDGHPRLIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLP-QLPRGADRWYLRRPHDPACF--TVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQ---DG---SVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSDKQEFGHDLFTLRRQAEG-GTPE--FPPFLDVGEHIEDED 442
            +DG P + + V TGGPCGGKTTALAR+  + R  GF   T PEA T L SNG+ + D  +++      Q TVLE QM LE+G+ ++ ++  KP V+LCDRGT+DG+ Y+ +  +  LL      ++ IR+ RYDA+FHL+TAA GAE +Y+L NN+ RTE+ E AREVD KTQ  W GHP  + IDNSTDFEGK++R+ +  +++VGLP  L R + ++ L+   D + F   + Y++ +V K+YL    K + D ++    Y+++  R+    DG      Y  T  Q  +DG   E KRII ERE+   + T  D SR  V Q R SFL+ +Q+FVV    S K+  G  +   + +A G   PE   PPFL+V   ++D D
Sbjct:   12 TDG-PPIFRFVFTGGPCGGKTTALARVFSYLRERGFECITCPEAYTTLSSNGMNV-DFFSTQGMPKVIQRTVLEVQMALEDGIHRVLKARGKPGVMLCDRGTMDGSVYMPQKEFSDLLSEMDTHIVQIRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLLKSKPDLSKFPPEIAYKEFEVEKIYL----KHIHDDKS---SYSFIRRRTNIDPDGRRLGSVYQSTLAQWTEDGELIEQKRIISEREYMSTSAT-RDTSRHVVQQRRISFLYNKQSFVVHIFQSPKE--GLCILHAQVEASGKAEPEVDLPPFLEVDRRLQDTD 383          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: XP_002295897.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >ACI64614.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 268.1 bits (684), Expect = 5.100e-68
Identity = 153/328 (46.65%), Postives = 205/328 (62.50%), Query Frame = 0
Query:   76 LIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLS-IREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLP-QLPRGADRWYLRRPHDPACFT--VPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVV 400
            L KIVLTGGPCGGKTT+LARLS + R  GF V T PEA ++L SNG+A   + A +      QDTV++ Q+ LE+G E++ R+  KPAV+LCDRG +DG+AY+  + WE L+ ++ +  +S +REGRY+AVFHLVTAA GAE +Y+L NNE RTE+PE ARE+D  T+  W GHP   + DNSTDFE K+ RV  + ARLVGLP  L R   ++ L+R  D + F   V Y+   V KVYL     +  D  N++ EY+++ +R+       A  SK           KRII +RE++       D +R  V Q R SFLW  Q+F V
Sbjct:   26 LYKIVLTGGPCGGKTTSLARLSPYLRERGFEVITCPEAFSLLVSNGMAFDYLGAVDGMSAVVQDTVMDIQIGLEDGFERVLRARGKPAVLLCDRGLMDGSAYMKSEEWEKLMNKRDVGCVSELREGRYNAVFHLVTAAEGAEKFYTLDNNEVRTETPELARELDHMTRNAWVGHPNLKIFDNSTDFETKMQRVVEEMARLVGLPHSLERVTTKFLLKREPDLSAFPEGVAYQIFDVEKVYLYEESTSNHD--NITKEYSFIRKRTSLNKDGQASGSK-----------KRIITKREYN-SLFNNRDKNRHVVRQKRISFLWNIQSFNV 339          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: XP_009538576.1 (hypothetical protein PHYSODRAFT_348519 [Phytophthora sojae] >EGZ05715.1 hypothetical protein PHYSODRAFT_348519 [Phytophthora sojae])

HSP 1 Score: 265.8 bits (678), Expect = 2.500e-67
Identity = 148/367 (40.33%), Postives = 211/367 (57.49%), Query Frame = 0
Query:   76 LIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSDKQEFGHDLFTLRRQAEGGTP-EFPPFLDVGEHIEDED 442
            + K VLTGGPC GKTT+L RLS FFR  GFRV+ VPEA+T+L + G    D+   E+    FQ  +L  Q+ LE+    +A+   KP VILCDRG +DG+AY+T + WE L     L+ +++R+ RY A+FHLVTAA GAE +YSL NN  R ES E ARE+D +T   W GHPK +V DNST FEGK+ R+ + AA L G+P   + + ++ L +   P      +E  +V KVYL       P+    S +Y++V  RSQ G  AY  T+ + LD G    LKR++  RE+ +     +DP+R  + Q R  FL+  Q+F +  +    +  G  +  ++   E       P FL++ + + D D
Sbjct:   38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDL--KEKDILNFQWQILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLEHDLDTVTLRDTRYIAIFHLVTAAEGAEKFYSLENNGIRIESIEQAREIDARTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVKASRKYQLAK--TPIEIPFHHEDFEVEKVYL------KPESAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRSDPTRNVIKQQRMCFLYKNQSFQIHVYKEPVELAGLAVLHVQASCENDQDIVMPSFLNIEKELPDTD 394          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: XP_008872509.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV99082.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 265.4 bits (677), Expect = 3.300e-67
Identity = 148/371 (39.89%), Postives = 217/371 (58.49%), Query Frame = 0
Query:   69 GSDGHPRLIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQRLDDGYE-AELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSDKQEFGHDLFTLRRQAEGGTP-EFPPFLDVGEHI 438
            G++  P + K VLTGGPC GKTT+L RLS +FR  GFRV+ VPEA+T+L + G  + D+ AS+   + +Q  +L  Q+ LE+    +A+    P VILCDRG +DG+AY++ D WE L  +  L+ +++R+ RY+AVFHLVTAA GAE YYSL NN TR+E+ E A E D +    W GHPK FV DNST FE K+ R+ + AA L GLP   + A ++ L     P  + +  E+ +V KVYL      LP     + +Y++V  R+Q G  +Y  T+ + L+D  E   LKR++  RE+ +      D +R+ + Q R  FLW  Q+F  I  + +     +      + ++  TP   P FLD+ + +
Sbjct:   31 GTESAPPIYKFVLTGGPCAGKTTSLDRLSSYFRERGFRVYMVPEASTLLQTGGAYVMDLKASDVMNFQWQ--ILSTQIALEDAFTSLAKDTKCPCVILCDRGAMDGSAYMSSDQWEELKSQHDLDTVTLRDSRYNAVFHLVTAANGAESYYSLENNVTRSETLEQAIEADNRLCHAWIGHPKFFVFDNSTGFESKMQRLISTAANLTGLPSTVKTAKKYLLTAL--PPSWPIHVEEFEVEKVYL----SVLPTTDEGTKDYDFVRCRTQYGLPSYGMTTVRYLEDSDEPVHLKRVLSAREYAYAVRHRKDHARQVIKQRRICFLWNNQSF-NIHWYKEPATIANQGIVHVQASDSDTPVSIPDFLDIAQEL 392          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: XP_024573219.1 (isoform b [Plasmopara halstedii] >CEG36850.1 isoform b [Plasmopara halstedii])

HSP 1 Score: 265.0 bits (676), Expect = 4.300e-67
Identity = 149/374 (39.84%), Postives = 210/374 (56.15%), Query Frame = 0
Query:   69 GSDGHPRLIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSDKQEFGHDLFTLRRQAEGGTP-EFPPFLDVGEHIEDED 442
            G      + K VLTGGPC GKTT+L RLS FFR  GFRV+ VPEA+T+L + G    D+   E+    FQ  +L  Q+ LE+    +A    KP VILCDRG +DG+AY+T + WE L     L+ +++R+ RY A+FHLVTAA GAE +YSL NN  R ES E AR +D +T   W GHPK +V DNST FEGK+ R+ + AARL G+P   + + ++ L +   P      +E  +V KVYL       P+    S +Y++V  RSQ G  AY  T+ + LD G    LKR++  RE+ F     +DP+R  + Q R  FL+  Q+F +  +       G  +  ++   +       P FL++ + + D D
Sbjct:   28 GQKDEAPIYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDL--QEKDILNFQWQILSLQISLEDSFHSLALDSGKPCVILCDRGVMDGSAYMTPEQWEILKLEHDLDTVTLRDTRYIAIFHLVTAAHGAEKFYSLENNGIRIESIEEARAIDKRTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAARLCGIPSTVKASRKYLLAKA--PVVIPFHHEDFEVEKVYL------KPEAAKSSNDYSFVRCRSQYGIPAYGMTTVRYLDTGDVVHLKRVLSAREYSFAIKHRSDPTRNVIKQQRMCFLYENQSFQIHVYKEPADLVGLSILHVQASCKNDQDIVMPLFLNIEKELPDTD 391          
BLAST of NO04G01470 vs. NCBI_GenBank
Match: POM71896.1 (CYTH-like domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 264.6 bits (675), Expect = 5.700e-67
Identity = 148/367 (40.33%), Postives = 210/367 (57.22%), Query Frame = 0
Query:   76 LIKIVLTGGPCGGKTTALARLSEFFRTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLENGVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREGRYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPKHFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTVPYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQRLDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVIDHHSDKQEFGHDLFTLRRQAEGGTP-EFPPFLDVGEHIEDED 442
            + K VLTGGPC GKTT+L RLS FFR  GFRV+ VPEA+T+L + G    D+   E+    FQ  +L  Q+ LE+    +A+   KP VILCDRG +DG+AY+T + WE L     L+ +++R+ RY A+FHLVTAA GAE +YSL NN  R ES E AR +D +T   W GHPK +V DNST FEGK+ R+ + AA L G+P   R + ++ L +   P      +E  +V KVYL       P+    S +Y++V  RSQ G  AY  T+ + LD G    LKR++  RE+ +     +DP+R  + Q R  FL+  Q+F +  +    +  G  +  ++   E       P FL++ + + D D
Sbjct:   38 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDL--KEKDILNFQWQILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEDLKLEHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDKRTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVRASRKYLLAK--TPIEIPFHHEDFEVEKVYL------KPEAAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRSDPTRNVIKQQRMCFLYENQSFQIHVYKEPAELAGLAVLHVQASCENDQDIVIPSFLNIEKELPDTD 394          
The following BLAST results are available for this feature:
BLAST of NO04G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856067.16.700e-19384.42hypothetical protein NGA_2017900, partial [Nannoch... [more]
EWM28608.12.200e-19183.90hypothetical protein Naga_100009g31 [Nannochlorops... [more]
CBJ25676.14.200e-7039.33conserved unknown protein [Ectocarpus siliculosus][more]
GAX22696.11.000e-6842.19hypothetical protein FisN_4Hh192 [Fistulifera sola... [more]
GAX19223.11.000e-6842.19hypothetical protein FisN_4Lh192 [Fistulifera sola... [more]
XP_002295897.15.100e-6846.65predicted protein, partial [Thalassiosira pseudona... [more]
XP_009538576.12.500e-6740.33hypothetical protein PHYSODRAFT_348519 [Phytophtho... [more]
XP_008872509.13.300e-6739.89hypothetical protein, variant [Aphanomyces invadan... [more]
XP_024573219.14.300e-6739.84isoform b [Plasmopara halstedii] >CEG36850.1 isofo... [more]
POM71896.15.700e-6740.33CYTH-like domain containing hypothetical protein [... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009665NSK009665Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01470.1NO04G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578453gene_1934Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g31gene2034Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01470.1NO04G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01470 ID=NO04G01470|Name=NO04G01470|organism=Nannochloropsis oceanica|type=gene|length=1386bp
ATGGCAGGTCCTCCATCTCCACCAATAGAGCAAGTGGCAGCAGTGACGTC
AAATGTCACCCATCCTGGGCCTTCTGCCATGCACAGCCACCTCCACCTTC
AGGACCACCGCCATCAACAACAAGACCCGCCCGCTGCCGCAACGGTCAAT
ATCAATCATGGCCAGCACCAGTCCTCAGAGCAGGAGCAAGAGCTACAGCA
CCAAGGCAGCGACGGTCATCCTCGGCTAATCAAAATTGTTCTCACGGGCG
GGCCCTGCGGAGGGAAAACTACGGCACTCGCGCGCTTGTCGGAATTCTTT
CGCACCCACGGCTTTCGTGTCTTTACAGTCCCAGAGGCTGCTACTATGCT
TTGGTCGAATGGCGTTGCCTTGTCAGATGTCCTGGCCTCGGAAGAAACTC
AGTATTGGTTTCAAGACACCGTGTTGGAGTTCCAGATGCATTTGGAGAAT
GGGGTAGAGAAGATTGCGCGGTCCTTGAACAAGCCGGCAGTAATACTGTG
TGATCGCGGCACATTGGACGGGGCAGCGTATGTGACTAAGGACATGTGGG
AGACCTTGTTGAAGAGAAAAGGGCTTGAACTTTTGTCGATTCGGGAGGGG
AGGTATGATGCGGTATTTCATTTGGTTACGGCTGCGACGGGTGCGGAGCT
TTATTATTCGCTTATGAACAATGAGACTCGAACGGAGTCGCCCGAATTTG
CGCGCGAAGTGGATTTGAAGACGCAAGGCGTGTGGAATGGGCATCCGAAG
CATTTTGTGATTGACAACTCTACGGACTTTGAAGGGAAGTTGGCGCGAGT
GCAGAACCAAGCTGCTCGGCTTGTAGGCTTGCCGCAATTGCCCCGTGGCG
CAGATCGTTGGTACCTGCGCCGGCCACATGACCCAGCATGCTTCACAGTG
CCGTACGAGAAGACGCAAGTCCGCAAGGTGTATTTGGTCAATGTAGGGAA
GGCTTTGCCGGATGGGAGGAATGTAAGCGTTGAGTACAACTATGTTGAAG
AGAGGTCGCAAGATGGTTCGGTAGCCTACGCACACACGAGCAAGCAGCGC
CTGGATGATGGATATGAGGCCGAGTTGAAGCGCATCATCGATGAGCGGGA
GTTTCACTTCCGTGCCACGACTATGGCGGACCCGTCGCGAAAGGAAGTGT
TTCAAACGCGTTACTCCTTCTTGTGGGCGCAGCAGGCTTTTGTGGTCATT
GATCACCATTCGGACAAACAGGAGTTTGGTCATGATCTATTTACGCTTCG
GCGGCAGGCTGAGGGAGGCACGCCGGAGTTCCCGCCTTTTTTGGATGTGG
GAGAGCACATTGAGGATGAAGACGGGCTATTCCCTTTTCCAACGCGCCCG
GCACCGTCACCCGTGAAGAAGGAGACAGTAGTCTAG
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protein sequence of NO04G01470.1

>NO04G01470.1-protein ID=NO04G01470.1-protein|Name=NO04G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MAGPPSPPIEQVAAVTSNVTHPGPSAMHSHLHLQDHRHQQQDPPAAATVN
INHGQHQSSEQEQELQHQGSDGHPRLIKIVLTGGPCGGKTTALARLSEFF
RTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLEN
GVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREG
RYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPK
HFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTV
PYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQR
LDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVI
DHHSDKQEFGHDLFTLRRQAEGGTPEFPPFLDVGEHIEDEDGLFPFPTRP
APSPVKKETVV*
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Synonyms
Publications