NO04G00330, NO04G00330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00330 vs. NCBI_GenBank
Match: EWM28439.1 (golgi snap receptor complex member 2 [Nannochloropsis gaditana]) HSP 1 Score: 334.7 bits (857), Expect = 2.100e-88 Identity = 171/212 (80.66%), Postives = 192/212 (90.57%), Query Frame = 0 Query: 1 MTSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCWKAVS 213 MTSVAELLPKTKKLAFELQ QVRQVE+GYVSPDNVFMGL ELERQI IL+TLV QERPGAREQW+R+I EL +EA+FLRTVL+RFLQSRG++ QEAKERE+LLARRYGKG D E P +++L+EEGASYQRS MMNDILMSGQATLSNLLDQRSSLKSARKKVLD+L+LLG+S RI GMAERRD VDK+IV GGM +TL+VLW+CWKAVS Sbjct: 1 MTSVAELLPKTKKLAFELQGQVRQVEIGYVSPDNVFMGLGELERQISILHTLVAQERPGAREQWQRRIGELHSEAVFLRTVLNRFLQSRGKVAQEAKEREELLARRYGKGGDLEAPARAVEELLEEGASYQRSSAMMNDILMSGQATLSNLLDQRSSLKSARKKVLDVLNLLGVSHRITGMAERRDTVDKLIVAGGMAVTLLVLWLCWKAVS 212
BLAST of NO04G00330 vs. NCBI_GenBank
Match: CBJ32581.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 195.3 bits (495), Expect = 1.900e-46 Identity = 103/208 (49.52%), Postives = 147/208 (70.67%), Query Frame = 0 Query: 1 MTSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCW 209 MTS+ EL PK ++L+F+L++ ++ VE G+ SPD+ M L E RQ+ +L +LVGQERP RE WRRK+ EL NE FLR L RF Q R ++ QEAKERE+LLARR+ P+ MD EEG+S RS M+ D L +GQA+L++L++QRS LK+A +KVLD+ ++LG+S+ I+ +++RR AVD+++V GG+ +T V LW W Sbjct: 1 MTSIVELFPKARRLSFDLRTLLQYVERGHASPDDAGMNLEEFGRQLDVLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRH-----AALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSDRRQAVDRLLVLGGIIVTSVFLWWMW 203
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_002287830.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95273.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 151.4 bits (381), Expect = 3.200e-33 Identity = 86/206 (41.75%), Postives = 129/206 (62.62%), Query Frame = 0 Query: 1 MTSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLA-RRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLW 206 MTS+ EL PK++KLA++ + Q+ QV+ G + P +F+ L EL RQ+ ++ L +E P RE W+RKI EL +A +R + + + +++ KER++LLA RR G+ M QL EE S S MMND+L SGQA+LSNL+ QR ++ +K+LDI + +G+S+ M M ERRDA D +V GGM +TL+V++ Sbjct: 1 MTSIVELFPKSRKLAYDSRQQLSQVQNGLICPSELFLSLDELSRQLDLMENLTNKETPAQREIWKRKILELREDAQSIRNQGNHYDRMVSAGIRQRKERDELLARRRXXXXXXGDADE--MQQLSEEADSLATSHGMMNDLLSSGQASLSNLVGQRQRMRWVNRKMLDIGNKIGLSNSTMRMIERRDATDAWLVFGGMIVTLLVIY 204
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_002185781.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65251.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 130.2 bits (326), Expect = 7.700e-27 Identity = 76/209 (36.36%), Postives = 122/209 (58.37%), Query Frame = 0 Query: 1 MTSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQE-AKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCW 209 MTS+ EL PK +KLA++ + QV QV+ G VS ++++ L EL RQ+ + LV +E P R+ W RKI+EL +E L + S R +ER++LL RR +G + + + L +E +S ++S M+ ++ GQA+L+ L++QR L+ + V DI + LG+S M + ERRD D +V GGM +T++V++ W Sbjct: 1 MTSIGELFPKCRKLAYDARQQVAQVQQGVVSATDLYVLLEELSRQLNAMEELVYRETPVQRDVWNRKIAELRHECTLLHQQGTQAAHSASRYRNPYGQERDELLRRRRRRGNESD-----VQDLSQESSSLEQSQNMVFGLIDQGQASLNGLIEQRQRLRGVNRMVFDIGNRLGLSQSTMKIIERRDITDAYLVAGGMIVTILVIYFVW 204
BLAST of NO04G00330 vs. NCBI_GenBank
Match: EJK46017.1 (hypothetical protein THAOC_35338 [Thalassiosira oceanica]) HSP 1 Score: 128.6 bits (322), Expect = 2.200e-26 Identity = 73/205 (35.61%), Postives = 117/205 (57.07%), Query Frame = 0 Query: 1 MTSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLW 206 MTS+ EL PK +K+ ++ + QV+ G + P N+F+ L EL RQ+ I+++L +E P R+ W RKI EL ++ LR + + + G +++ G+ M QL EE S S MMND+L SGQ++LS+L++QR ++ ++VL+I + LG+S + M ERRD D +V GGM +TL+V++ Sbjct: 116 MTSIVELFPKCRKICYDARQTAAQVQNGLIDPSNLFLSLDELSRQLDIMSSLAQKETPAQRQMWERKILELREDSDGLRRQGEHYDRMVGAGMRQRXXXXXXXXXXXXNRTTGDGVADEMAQLAEEADSLASSHGMMNDLLASGQSSLSSLVNQRQKMRWINRQVLNIGNKLGLSQSTIRMIERRDTTDAYLVFGGMIITLLVIY 320
BLAST of NO04G00330 vs. NCBI_GenBank
Match: OEU17587.1 (hypothetical protein FRACYDRAFT_238009 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 122.5 bits (306), Expect = 1.600e-24 Identity = 74/209 (35.41%), Postives = 117/209 (55.98%), Query Frame = 0 Query: 1 MTSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYG-KGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCW 209 MTS+ EL PK +KLA++ + Q+ QV+ G + P ++F L EL Q+ ++N LV +E P RE W+RKI E+ E + +R + + + V+ KER++LL RR K Q T L +E S+ +S M+ ++ +G+A+L+ L+DQR + K + I LG+S+ M + ERRD D V GG T +V++ W Sbjct: 1 MTSIVELFPKCRKLAYDSRQQLAQVQNGILHPSDLFCSLDELSNQLDMMNQLVLRETPAQREVWKRKIQEIREEQVGVRRQGEHYDKVVNTNVRHQKERDELLTRRRNRKQQYSSTEERDNLNLADEAKSWNQSQYMVTGLIANGEASLNTLVDQRRRMTGVSKFLGLIDDRLGISNSTMKVIERRDITDAYFVIGGCVFTCIVIYFTW 209
BLAST of NO04G00330 vs. NCBI_GenBank
Match: OQR92592.1 (hypothetical protein THRCLA_08668 [Thraustotheca clavata]) HSP 1 Score: 114.8 bits (286), Expect = 3.300e-22 Identity = 76/211 (36.02%), Postives = 116/211 (54.98%), Query Frame = 0 Query: 1 MTSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSE----LERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVC 208 M + L + +KL FEL++Q+ +E G ++ M E L I L++LV E G+RE W +K+++L E + L L+ R E +ER+ LL+RR G Q+ + + L +E S RS M++DI A+L NL DQR +K ++KVLD+ + LG+SS ++ + ERRD VDK IV GGM L L +++C Sbjct: 1 MATCGSLHMQARKLVFELKTQLGYLEQGTGGSQSLEMQARENAAALSTLISQLDSLVYNEAIGSREMWTKKVAQLREEYVLLNNTLELRCIQSSRSQIELQERQKLLSRRGGNNQNSD-----IALLSQEHNSLSRSSQMVSDITDLAYASLGNLSDQRDRMKGVQRKVLDVANRLGLSSSLLRVIERRDTVDKWIVYGGMALVLGFMYIC 206
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_024579150.1 (Golgi SNAP receptor complex member [Plasmopara halstedii] >CEG42781.1 Golgi SNAP receptor complex member [Plasmopara halstedii]) HSP 1 Score: 112.1 bits (279), Expect = 2.200e-21 Identity = 78/210 (37.14%), Postives = 116/210 (55.24%), Query Frame = 0 Query: 7 LLPKTKKLAFELQSQVRQVELGYVS-------PDNVFMGLSELERQIGILNTLVGQERPGA-REQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCW 209 L P+ +KL FEL+ Q+ ++ G S LE+ + L++LV A R+ W +K+ +L NE L + L++ + S R EA+ERE L+ RR G DG I+ Q E S QRS M++D+ Q+ L +L +QR+ +K+ R K+LDI + LG+SS ++ + ERRD VD IV GGM TLV L+VC+ Sbjct: 15 LYPQARKLQFELKMQMSYLDSGRTGGKTDAEVQAEARGNFSALEQLLWQLDSLVQMNTKSAERDTWTKKLQQLRNETFALGSTLEQHIYSLSRRNVEARERESLMNRR-NAGFDGGNGAIYAAQ---ESESLQRSSQMVSDLTNLSQSILGDLSEQRNRMKNVRTKLLDIANRLGLSSSLLRVIERRDTVDFWIVIGGMVFTLVFLYVCY 220
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_008878762.1 (hypothetical protein H310_13153 [Aphanomyces invadans] >ETV92726.1 hypothetical protein H310_13153 [Aphanomyces invadans]) HSP 1 Score: 111.3 bits (277), Expect = 3.700e-21 Identity = 77/215 (35.81%), Postives = 119/215 (55.35%), Query Frame = 0 Query: 3 SVAELLPKTKKLAFELQSQVRQVELGYVSPD-NVFMGLSE---------LERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVC 208 S A L P+ +KL FEL++Q+ +E SP +V G +E L+ + L++LV E P RE W +K+ ++ E L T L+R R E +ERE L++R+ + Q + + L +E S RS M+N++ G AT+SNL DQRS LK +KVLDI + LG+S ++ + ERR+ DK IV GG+ + L+ +++C Sbjct: 2 SCAALYPQARKLVFELKTQLNYLE---SSPSLDVLSGTTENQARENAAGLKSLVEQLDSLVYNENPSNREIWAKKVHQIREEYTLLNTTLERRCIQYSRSQIEFQEREKLMSRQRHQQQGND-----IHYLTQEHDSLHRSSRMINELNELGAATMSNLNDQRSRLKGVHRKVLDIANHLGLSGSLLRVIERRETADKWIVYGGIVVVLLFMYIC 208
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_012201981.1 (hypothetical protein SPRG_07452 [Saprolegnia parasitica CBS 223.65] >KDO27203.1 hypothetical protein SPRG_07452 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 109.8 bits (273), Expect = 1.100e-20 Identity = 74/208 (35.58%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 2 TSVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFM--GLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVC 208 T+ L P+ KL FEL++Q+ +++G S + + L I L++LV E P R+ W +K+ +L + L + L++ R E +ER+ LL+RR G G + + L +E S RS M+ND+ ATL NL DQR +K ++KVLD+ + LG+SS ++ + ERRD VDK IV GGM L ++VC Sbjct: 5 TTCGSLYPRAGKLVFELKTQLGYLDMGASSSTEMQARETAAALRSLIDQLDSLVYSENPTGRDIWMKKVQQLREDYALLNSTLEQRCIQSSRSQIELQERQKLLSRR-GNGAQND-----IAMLSQEYDSLGRSSRMVNDLTDLSYATLGNLSDQRDRMKGVQRKVLDVANRLGLSSSLLRIIERRDTVDKWIVYGGMVFVLGFMYVC 206 The following BLAST results are available for this feature:
BLAST of NO04G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00330 ID=NO04G00330|Name=NO04G00330|organism=Nannochloropsis oceanica|type=gene|length=2989bpback to top protein sequence of NO04G00330.1 >NO04G00330.1-protein ID=NO04G00330.1-protein|Name=NO04G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=213bpback to top Synonyms
Publications
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