NO04G00080, NO04G00080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00080 vs. NCBI_GenBank
Match: EWM28405.1 (cen [Nannochloropsis gaditana]) HSP 1 Score: 284.6 bits (727), Expect = 2.800e-73 Identity = 147/201 (73.13%), Postives = 164/201 (81.59%), Query Frame = 0 Query: 45 MKFLVTSALAFLALAPFALAVPVTTVAAEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPATPKERGSFDTRAFAAANSLTPVGGFYFLAQPEAAQ 246 M FL AL L + P ALA P T AA +L SLKTA IIPDVIS+F PTATL V YG+ P++MGE++LPSE A P VTF GT+P+K+YTLVMTDPGVLDIKTLR QQSAWQWLHWIVVNVPG+ AVPAAG+V+QPYG PAPPAGNHRYTF+LFEQKAEINPA PK R +FDTRAFA AN LTP+GGFYFLA PE AQ Sbjct: 1 MNFLRPLALTLL-MVPSALAAPATPAAA-SLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGLTPIGGFYFLAGPETAQ 199
BLAST of NO04G00080 vs. NCBI_GenBank
Match: BAV32137.1 (MOTHER OF FT AND TFL1 [Symplocarpus renifolius]) HSP 1 Score: 117.9 bits (294), Expect = 4.600e-23 Identity = 84/215 (39.07%), Postives = 112/215 (52.09%), Query Frame = 0 Query: 36 SPTRNSPKIMKFLVTSALAFLALAPFALAVPVTTVAAEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTF--TGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQK---AEINPATPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 +P+ + ++ ++ SA A L +L +PV T L +L A++IPDVI +F P A ++ YGR V G ++ PSE A P V G +YTL+MTDP S +WLHWIVV++PG+ A GK + PY P PP G HRY F++F+Q E+ P P RG F TR FAA N L PV YF A E A Sbjct: 8 APSTTAERLSVVVLVSAFASL-----SLLLPVATSRRSQLDALVAARVIPDVIDAFSPAAEVSARYGRRDVVD-GCDIKPSESASRPAVWIRGRGCSGDNLYTLIMTDPDAPS-----PSNPSEREWLHWIVVDIPGECNA-AKGKELVPYMGPEPPIGIHRYVFVVFKQNKTLGEVRP--PLGRGHFKTRGFAAQNGLGLPVAALYFNATKEPA 208
BLAST of NO04G00080 vs. NCBI_GenBank
Match: PIM98727.1 (Phosphatidylethanolamine binding protein [Handroanthus impetiginosus]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 67/174 (38.51%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 72 AEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPATPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 + L L ++I +V+ +F+P LTV Y V G E++P + +P V G D + YTLVMTDP V + + LHWIV ++PG + G+ + Y PP P G HRY F+LF+QKA + + P R F+TR FA NSL PV YF AQ E A Sbjct: 2 SRVLEPLSVGRVIGEVVDNFIPCVRLTVTYNSNKQVSNGHELMPGVIMAKPRVEIGGEDMRAAYTLVMTDPDVPGPSDPYLREH-----LHWIVTDIPGTTDA-SFGREIVSYEPPKPVIGIHRYVFILFKQKARHSVSPPPSRDYFNTRRFAEENSLGLPVAAVYFNAQRETA 169
BLAST of NO04G00080 vs. NCBI_GenBank
Match: XP_010936814.1 (PREDICTED: protein MOTHER of FT and TFL1 homolog 1 [Elaeis guineensis]) HSP 1 Score: 111.7 bits (278), Expect = 3.300e-21 Identity = 72/178 (40.45%), Postives = 96/178 (53.93%), Query Frame = 0 Query: 72 AEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAE----INPATPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 A + L ++I +V+ FVPT +++V+YG V G +M PS P V TG +YTLVMTDP + + +WLHW+VVN+PG P+ G+ V PY P PP G HRY +LF+QK+ I + P R +F+TRAFAA L PV YF AQ E A Sbjct: 2 ASCVDPLVVGRVIGEVVDLFVPTMSMSVNYG-SKHVNNGCDMKPSMAINPPTVQITGRG-SDLYTLVMTDPDAPS-----PSEPTMREWLHWVVVNIPGG-TDPSQGEEVVPYMGPRPPVGIHRYVLVLFQQKSRFSMGIGLSLPASRANFNTRAFAAQRDLGLPVAVVYFNAQKEPA 171
BLAST of NO04G00080 vs. NCBI_GenBank
Match: AMB21806.1 (FT06 [Lolium perenne]) HSP 1 Score: 110.9 bits (276), Expect = 5.600e-21 Identity = 70/174 (40.23%), Postives = 89/174 (51.15%), Query Frame = 0 Query: 72 AEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPATPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 A + L ++I +VI +F PT +TV Y V G E PS V +P + G D + +TLVMTDP V + + LHWIV N+PG + GK V Y P P G HR+TF+LF+QK + P R F+TR FAAAN L PV YF AQ E A Sbjct: 2 ARVVEPLIVGKVIGEVIDNFTPTEKMTVTYSSNKQVFNGHEFFPSAVVSKPRIEVQGGDMRSFFTLVMTDPDVPGPSDPYLREH-----LHWIVNNIPGTTDA-SFGKEVVSYESPKPNIGIHRFTFVLFKQKQRQTMSPPSSRDYFNTRRFAAANDLGLPVAAVYFNAQRETA 169
BLAST of NO04G00080 vs. NCBI_GenBank
Match: XP_021972070.1 (CEN-like protein 1 [Helianthus annuus] >OTG21692.1 putative phosphatidylethanolamine-binding protein PEBP [Helianthus annuus]) HSP 1 Score: 110.9 bits (276), Expect = 5.600e-21 Identity = 66/169 (39.05%), Postives = 88/169 (52.07%), Query Frame = 0 Query: 77 SLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPATPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 SL ++I DV+ F P+ T+ V Y PV G E+ P+ +A +P V G D + YTL+MTDP + + LHWIV ++PG G+ + Y P P G HRY FLLF+Q+A + P R F+TRAF+ N L PV YFLAQ E A Sbjct: 32 SLVVGRVIGDVVDQFTPSVTMDVVYNPQCPVLNGHEIRPNLIATKPRVNIGGVDMRSSYTLIMTDPDAPSPSDPYLREH-----LHWIVTDIPGTTDA-TFGREIVSYEKPKPVIGIHRYVFLLFKQRARQSVRRPVARDRFNTRAFSQENDLGLPVAASYFLAQRENA 194
BLAST of NO04G00080 vs. NCBI_GenBank
Match: XP_007160508.1 (hypothetical protein PHAVU_002G327700g [Phaseolus vulgaris] >ESW32502.1 hypothetical protein PHAVU_002G327700g [Phaseolus vulgaris]) HSP 1 Score: 110.2 bits (274), Expect = 9.500e-21 Identity = 68/175 (38.86%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 72 AEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPA-TPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 A ++ L ++I DV+ FVP+ ++V YG V G ++ PS P +T TG + +YTL+MTDP + + +W+HW+V ++PG P GK + PY P PP G HRY F+LFEQKA + P P+ RG+F TR FA L PV YF +Q E A Sbjct: 2 AASVDPLVVGRVIGDVVDMFVPSVNMSVYYG-SKHVTSGCDIKPSIAVNPPKLTLTG-KKENLYTLIMTDPDAPS-----PSEPNMREWIHWVVADIPG-CTNPFRGKEIIPYTGPKPPVGIHRYIFVLFEQKAPMGPVEQPESRGNFSTRTFAKDMDLGLPVATVYFNSQKEPA 168
BLAST of NO04G00080 vs. NCBI_GenBank
Match: XP_011076204.1 (CEN-like protein 1 [Sesamum indicum]) HSP 1 Score: 109.4 bits (272), Expect = 1.600e-20 Identity = 67/171 (39.18%), Postives = 86/171 (50.29%), Query Frame = 0 Query: 75 LTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPATPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 L L ++I +V+ SF+P LTV + V G E++PS + +P V G D + YTLVMTDP V + + LHWIV ++PG + G+ + Y P P G HRY FLLF QKA P R F+TR FA N L PV YF AQ E A Sbjct: 5 LDPLSVGRVIGEVVDSFIPCVKLTVTFNSNKQVSNGHELMPSVITSKPRVEIGGEDLRAAYTLVMTDPDVPGPSDPYLREH-----LHWIVTDIPGTTDA-SFGREIVSYETPKPVIGIHRYVFLLFRQKARHTVRPPASRDLFNTRRFAEENGLGLPVAAVYFNAQRETA 169
BLAST of NO04G00080 vs. NCBI_GenBank
Match: OWM62629.1 (hypothetical protein CDL15_Pgr019923 [Punica granatum] >PKI52820.1 hypothetical protein CRG98_026768 [Punica granatum]) HSP 1 Score: 109.4 bits (272), Expect = 1.600e-20 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 0 Query: 72 AEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPA-TPKERGSFDTRAFAAANSLT-PVGGFYFLAQPEAA 245 A ++ L ++I DV+ FVPT ++V+YG V G ++ PS A P VT +G P ++YTLVMTDP + S +W+HWIVV++PG V + G+ + PY P PP G HRY +LF+Q+A + P R +F+TR FAA L+ PV YF +Q E A Sbjct: 2 ASSVDPLIVGRVIGDVVDMFVPTVNISVNYG-SKHVNNGCDIKPSMSADTPKVTISGR-PDQLYTLVMTDPDAPS-----PSEPSMREWVHWIVVDIPGGTNV-SRGREILPYMGPRPPVGIHRYILVLFQQRAPLGLVDQPTSRANFNTRHFAAHFGLSLPVATVYFNSQKEPA 168
BLAST of NO04G00080 vs. NCBI_GenBank
Match: XP_004967983.1 (protein MOTHER of FT and TFL1 homolog 2 [Setaria italica] >KQL04101.1 hypothetical protein SETIT_004700mg [Setaria italica]) HSP 1 Score: 108.6 bits (270), Expect = 2.800e-20 Identity = 68/174 (39.08%), Postives = 93/174 (53.45%), Query Frame = 0 Query: 72 AEALTSLKTAQIIPDVISSFVPTATLTVDYGRMTPVKMGEEMLPSEVAKEPVVTFTGTDPKKMYTLVMTDPGVLDIKTLRVEQQSAWQWLHWIVVNVPGDMAVPAAGKVVQPYGPPAPPAGNHRYTFLLFEQKAEINPATPKERGSFDTRAFAAANSL-TPVGGFYFLAQPEAA 245 A + L ++I +V+ FVP+ ++TV YG + G + PS A P+V +G +YTL+MTDP + ++LHWIV N+PG +VV+ Y P PP G HRY +LFEQK +N P ER +F+TRAFAAA+ L P YF AQ E A Sbjct: 2 ARFVEPLVVGRVIGEVVDLFVPSISMTVAYG-PKDISNGRLLKPSATAAPPLVRISGR-RNDLYTLIMTDPDAPS-----PSDPTMREYLHWIVTNIPGGTDATKGEEVVE-YMGPRPPVGIHRYVLVLFEQKTRVNAEAPGERANFNTRAFAAAHELGLPTAVVYFNAQKEPA 167 The following BLAST results are available for this feature:
BLAST of NO04G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00080 ID=NO04G00080|Name=NO04G00080|organism=Nannochloropsis oceanica|type=gene|length=2696bpback to top protein sequence of NO04G00080.1 >NO04G00080.1-protein ID=NO04G00080.1-protein|Name=NO04G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=246bpback to top Synonyms
Publications
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