NO30G01190, NO30G01190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G01190 vs. NCBI_GenBank
Match: AUX45106.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 166.0 bits (419), Expect = 2.300e-37 Identity = 86/225 (38.22%), Postives = 126/225 (56.00%), Query Frame = 0 Query: 150 AYGIYLLFTAMHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFRELG 375 A Y +FT MH+A HRS++R LN +IG +G+ +AP A RH H+EHHKHTN D+DPD W SG G P +LLP W TQ+LY YY + + E + + ++ + + A +G +++ + + P + FLA++FDY PH PH +T A++ Y T + + +L QNYH IHHLYP +P+YRY+ VW +E +LG Sbjct: 78 AVAAYAVFTPMHEAGHRSLARSALLNGVIGRLSGVLLMAPFLAVRHFHVEHHKHTNEADQDPDHW-SGRG---PWWLLPLRWATQDLYYYYLFLRSYRAQKRGERIETVATMAVFLGLVALAFGLGYGEVVLLYWIAPARVAIFFLAFAFDYLPHYPHGVTAAQDRYRATRAVDSAI--------FNVLLFGQNYHLIHHLYPAVPFYRYRAVWKYQREELLKLG 290
BLAST of NO30G01190 vs. NCBI_GenBank
Match: WP_104983533.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 166.0 bits (419), Expect = 2.300e-37 Identity = 86/225 (38.22%), Postives = 126/225 (56.00%), Query Frame = 0 Query: 150 AYGIYLLFTAMHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFRELG 375 A Y +FT MH+A HRS++R LN +IG +G+ +AP A RH H+EHHKHTN D+DPD W SG G P +LLP W TQ+LY YY + + E + + ++ + + A +G +++ + + P + FLA++FDY PH PH +T A++ Y T + + +L QNYH IHHLYP +P+YRY+ VW +E +LG Sbjct: 99 AVAAYAVFTPMHEAGHRSLARSALLNGVIGRLSGVLLMAPFLAVRHFHVEHHKHTNEADQDPDHW-SGRG---PWWLLPLRWATQDLYYYYLFLRSYRAQKRGERIETVATMAVFLGLVALAFGLGYGEVVLLYWIAPARVAIFFLAFAFDYLPHYPHGVTAAQDRYRATRAVDSAI--------FNVLLFGQNYHLIHHLYPAVPFYRYRAVWKYQREELLKLG 311
BLAST of NO30G01190 vs. NCBI_GenBank
Match: AGP38836.1 (hypothetical protein SCE1572_32735 [Sorangium cellulosum So0157-2]) HSP 1 Score: 163.7 bits (413), Expect = 1.200e-36 Identity = 97/276 (35.14%), Postives = 137/276 (49.64%), Query Frame = 0 Query: 143 IAWPTLFAY-GIYLLFTA-----------------------------MHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFRELGTP-LANWLGPLHLV 388 I WPTL + G Y LF A MH+A HRS++R LN ++G +G+ +AP A RH HLEHHKHTN D+DPD W SG G P +LLP W TQ+L+ YY + + E + I ++ + + A +G L + + ++P + FLA++FDY PH PHEIT +N Y T + + +L Q YH IHHLYP +P++RY+ VW +E +L + LA PL L+ Sbjct: 14 IEWPTLALFAGSYALFAASVYAGXXXXXXXXXXXXXXXXXXXXXXXPMHEAAHRSLARSALLNGVVGRLSGLLLMAPFLAVRHFHLEHHKHTNDADRDPDHW-SGRG---PWYLLPLRWATQDLHYYYLFLRSYHAQKRGERIETIATLAAMFAIVALAFGLGYGELALLYWIVPARLAIFFLAFAFDYLPHYPHEITAGQNRYRATRAIDSAL--------FNVLLFGQTYHLIHHLYPAVPFFRYRTVWKYQREELMKLQSENLAPLRAPLPLL 277
BLAST of NO30G01190 vs. NCBI_GenBank
Match: KYF71553.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 163.7 bits (413), Expect = 1.200e-36 Identity = 84/224 (37.50%), Postives = 124/224 (55.36%), Query Frame = 0 Query: 150 AYGIYLLFTAMHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFREL 374 A Y +FT MH+A HRS++R LN ++G AG+ +AP A RH H+EHHKHTN D+DPD W SG G P +LLP W TQ+L+ YY + + E + + ++ ++ + A G +V + ++P + FLA++FDY PH PH IT A++ Y T + + +L Q YH IHHLYP +P++RY+ VW + +E L Sbjct: 107 AVAAYAVFTPMHEAAHRSLARSALLNGVVGRLAGLLLMAPFLAVRHFHIEHHKHTNEADRDPDHW-SGRG---PWYLLPLRWATQDLHYYYLFLRSYGAQKRSERIETVATLAAMLSLVALAFGLGFGERVVLYWIVPARLAIFFLAFAFDYLPHYPHGITAAQDRYRATRAVDSAL--------FNVLLFGQTYHLIHHLYPAVPFFRYRTVWKHQREELLRL 318
BLAST of NO30G01190 vs. NCBI_GenBank
Match: WP_063752052.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 163.7 bits (413), Expect = 1.200e-36 Identity = 97/276 (35.14%), Postives = 137/276 (49.64%), Query Frame = 0 Query: 143 IAWPTLFAY-GIYLLFTA-----------------------------MHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFRELGTP-LANWLGPLHLV 388 I WPTL + G Y LF A MH+A HRS++R LN ++G +G+ +AP A RH HLEHHKHTN D+DPD W SG G P +LLP W TQ+L+ YY + + E + I ++ + + A +G L + + ++P + FLA++FDY PH PHEIT +N Y T + + +L Q YH IHHLYP +P++RY+ VW +E +L + LA PL L+ Sbjct: 74 IEWPTLALFAGSYALFAASVYAGXXXXXXXXXXXXXXXXXXXXXXXPMHEAAHRSLARSALLNGVVGRLSGLLLMAPFLAVRHFHLEHHKHTNDADRDPDHW-SGRG---PWYLLPLRWATQDLHYYYLFLRSYHAQKRGERIETIATLAAMFAIVALAFGLGYGELALLYWIVPARLAIFFLAFAFDYLPHYPHEITAGQNRYRATRAIDSAL--------FNVLLFGQTYHLIHHLYPAVPFFRYRTVWKYQREELMKLQSENLAPLRAPLPLL 337
BLAST of NO30G01190 vs. NCBI_GenBank
Match: KYG03080.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 162.5 bits (410), Expect = 2.600e-36 Identity = 97/276 (35.14%), Postives = 136/276 (49.28%), Query Frame = 0 Query: 143 IAWPTLFAY-GIYLLFTA-----------------------------MHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFREL-GTPLANWLGPLHLV 388 I WPTL + G Y LF A MH+A HRS++R LN ++G +G+ +AP A RH HLEHHKHTN D+DPD W SG G P +LLP W TQ+L+ YY + + E + I ++ + + A +G L + + ++P + FLA++FDY PH PH IT A+N Y T + + +L Q YH IHHLYP +P++RY+ VW +E +L LA PL L+ Sbjct: 14 IEWPTLALFAGSYALFAASVYAGXXXXXXXXXXXXXXXXXXXXXXXPMHEAAHRSLARSALLNGVVGRLSGLLLMAPFLAVRHFHLEHHKHTNDADRDPDHW-SGRG---PWYLLPLRWATQDLHYYYLFLRSYHAQKRGERIETIATLAAMFAIVALAFGLGYGELALLYWIVPARLAIFFLAFAFDYLPHYPHGITAAQNRYRATRAIDSAL--------FNVLLFGQTYHLIHHLYPAVPFFRYRTVWKYQREELMKLQSESLAPLRAPLPLL 277
BLAST of NO30G01190 vs. NCBI_GenBank
Match: KYF56498.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 161.0 bits (406), Expect = 7.500e-36 Identity = 86/224 (38.39%), Postives = 118/224 (52.68%), Query Frame = 0 Query: 150 AYGIYLLFTAMHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFREL 374 A Y FT MH+A HRS++R LN ++G +G+ +AP PA RH H+EHHKHTN D+DPD W SG G P +LLPF W TQ+L+ YY + + A G L V + ++P + FLA++FDY PH PH IT +N Y T + L+ +L Q YH IHHLYP +P++RY+ VW + +E +L Sbjct: 107 AVAAYAAFTPMHEAAHRSLARSALLNGVLGRLSGLLLMAPFPAVRHFHMEHHKHTNEADRDPDHW-SGRG---PWYLLPFRWATQDLHYYYLFLRSYRAQRRGXXXXXXXXXXXXXXXXXLAFALGVGELAVLYWIVPARLAIFFLAFAFDYLPHYPHGITATQNRYRATRAVDSAL--------LNVLLFGQTYHLIHHLYPAVPFFRYRTVWKHQREELLKL 318
BLAST of NO30G01190 vs. NCBI_GenBank
Match: KYF53185.1 (delta(12)-fatty acid dehydrogenase, partial [Sorangium cellulosum]) HSP 1 Score: 160.6 bits (405), Expect = 9.800e-36 Identity = 92/261 (35.25%), Postives = 130/261 (49.81%), Query Frame = 0 Query: 143 IAWPTLFAY-GIYLLFTA-----------------------------MHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFREL 374 I WPTL + G Y LF A MH+A HRS++R LN ++G +G+ +AP A RH HLEHHKHTN D+DPD W SG G P +LLP W TQ+L+ YY + + E + I ++ + + A +G L + + ++P + FLA++FDY PH PHEIT +N Y T + + +L Q YH IHHLYP +P++RY+ VW +E +L Sbjct: 14 IEWPTLALFAGSYALFAASVYAGXXXXXXXXXXXXXXXXXXXXXXXPMHEAAHRSLARSALLNGVVGRLSGLLLMAPFLAVRHFHLEHHKHTNDADRDPDHW-SGRG---PWYLLPLRWATQDLHYYYLFLRSYHAQKRGERIETIATLAAMFAIVALAFGLGYGELALLYWIVPARLAIFFLAFAFDYLPHYPHEITAGQNRYRATRAIDSAL--------FNVLLFGQTYHLIHHLYPAVPFFRYRTVWKYQREELMKL 262
BLAST of NO30G01190 vs. NCBI_GenBank
Match: KYF76757.1 (delta(12)-fatty acid dehydrogenase, partial [Sorangium cellulosum]) HSP 1 Score: 160.6 bits (405), Expect = 9.800e-36 Identity = 93/261 (35.63%), Postives = 126/261 (48.28%), Query Frame = 0 Query: 143 IAWPTLFAY-GIYLLFTA-----------------------------MHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFREL 374 I WPTL + G Y LF A MH+A HRS++R LN ++G +G+ +AP PA RH HLEHHKHTN D+DPD W SG G P +LLP W TQ+L+ YY + + E + A HG L + + ++P + FLA++FDY PH PHE T A+N Y T + + +L Q YH IHHLYP +P++RY+ VW +E +L Sbjct: 14 IEWPTLALFAGSYALFAASVYAGXXXXXXXXXXXXXXXXXXXXXXXPMHEAAHRSLARSALLNGVVGRLSGLLLMAPFPAVRHFHLEHHKHTNDADRDPDHW-SGRG---PWYLLPLRWATQDLHYYYLFLRSYHAQKRSEXXXXXXXXXXXXXXVALAFGLGHGELALLYWIVPARLAIFFLAFAFDYLPHYPHETTAAQNRYRATRAIDSAL--------FNVLLFGQTYHLIHHLYPAVPFFRYRTVWKYQREELMKL 262
BLAST of NO30G01190 vs. NCBI_GenBank
Match: KYF96512.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 160.6 bits (405), Expect = 9.800e-36 Identity = 93/261 (35.63%), Postives = 126/261 (48.28%), Query Frame = 0 Query: 143 IAWPTLFAY-GIYLLFTA-----------------------------MHDAVHRSVSRHKWLNELIGWGAGIAFLAPLPAYRHIHLEHHKHTNVPDKDPDMWTSGNGMHPPTFLLPFFWLTQNLYNYYWYWLQLTTRPLDESLPVIFSVLGIIVSIVYALTNEHGYLLVRFLLLPRCFSDTFLAYSFDYAPHRPHEITRAENIYACTAQLSGFFSPTEKDVDLSAILMQQNYHNIHHLYPMIPWYRYKKVWLNHEKEFREL 374 I WPTL + G Y LF A MH+A HRS++R LN ++G +G+ +AP PA RH HLEHHKHTN D+DPD W SG G P +LLP W TQ+L+ YY + + E + A HG L + + ++P + FLA++FDY PH PHE T A+N Y T + + +L Q YH IHHLYP +P++RY+ VW +E +L Sbjct: 14 IEWPTLALFAGSYALFAASVYAGXXXXXXXXXXXXXXXXXXXXXXXPMHEAAHRSLARSALLNGVVGRLSGLLLMAPFPAVRHFHLEHHKHTNDADRDPDHW-SGRG---PWYLLPLRWATQDLHYYYLFLRSYHAQKRSEXXXXXXXXXXXXXXVALAFGLGHGELALLYWIVPARLAIFFLAFAFDYLPHYPHETTAAQNRYRATRAIDSAL--------FNVLLFGQTYHLIHHLYPAVPFFRYRTVWKYQREELMKL 262 The following BLAST results are available for this feature:
BLAST of NO30G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G01190 ID=NO30G01190|Name=NO30G01190|organism=Nannochloropsis oceanica|type=gene|length=2139bpback to top protein sequence of NO30G01190.1 >NO30G01190.1-protein ID=NO30G01190.1-protein|Name=NO30G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=393bpback to top Synonyms
Publications
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