NO30G00990, NO30G00990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO30G00990 vs. NCBI_GenBank
Match: XP_005853475.1 (hypothetical protein NGA_0442100 [Nannochloropsis gaditana CCMP526] >EKU22885.1 hypothetical protein NGA_0442100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 171.8 bits (434), Expect = 1.600e-39 Identity = 92/150 (61.33%), Postives = 106/150 (70.67%), Query Frame = 0 Query: 1 MSRRLLKHGAEAFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIESLYKKIVTEAQKRR 151 MSRRLLK+G EA KPHFVDGRW+RPLISKRVAARLRKEA+ NG G Q + V+AP++LRPAKLH RER REERFQKIETAMAGM AK+AQHKES+++LKPK GIE+LYKK+V +AQKRR Sbjct: 1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVAARLRKEAVMNGRVGPWQPSVQ-------DSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 143
BLAST of NO30G00990 vs. NCBI_GenBank
Match: EWM20708.1 (hypothetical protein Naga_100551g2 [Nannochloropsis gaditana]) HSP 1 Score: 146.7 bits (369), Expect = 5.600e-32 Identity = 92/204 (45.10%), Postives = 106/204 (51.96%), Query Frame = 0 Query: 1 MSRRLLKHGAEAFKPHFVDGRWQRPLISKRV------------------------------------------------------AARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIESLYKKIVTEAQKRR 151 MSRRLLK+G EA KPHFVDGRW+RPLISKRV AARLRKEA+ NG G Q + V+AP++LRPAKLH RER REERFQKIETAMAGM AK+AQHKES+++LKPK GIE+LYKK+V +AQKRR Sbjct: 1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQ-------DSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 197
BLAST of NO30G00990 vs. NCBI_GenBank
Match: XP_009035045.1 (hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens] >EGB10228.1 hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens]) HSP 1 Score: 92.0 bits (227), Expect = 1.600e-15 Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 0 Query: 3 RRLLKHGAEAFKPHFVDG----RWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIESLYKKI 143 R+L KHGA A KP V G W+RPL+S+R AA RK+ALA+GT+G+ + V APRVL KLHKRERTR +RF +E +A M K+A ++ ++ + KP G+ESL K++ Sbjct: 852 RKLAKHGAAALKPQRVGGPGANPWRRPLLSRRQAADARKQALASGTFGTFDASRG---------------------GWLEAWDAVAAPRVLTAPKLHKRERTRADRFASVEANLADMPKKIAAYRAAVDARKPPPGVESLMKRL 974
BLAST of NO30G00990 vs. NCBI_GenBank
Match: EJK63269.1 (hypothetical protein THAOC_16084 [Thalassiosira oceanica]) HSP 1 Score: 85.9 bits (211), Expect = 1.200e-13 Identity = 48/140 (34.29%), Postives = 73/140 (52.14%), Query Frame = 0 Query: 3 RRLLKHGAEAFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIESLYKKI 143 R+L +HG EA +P V+ RW++P++S+RVAA LRK A+ +GTYG+ + RP K HK +RTRE R Q+IE +A D K+ + + +++ KPK GIE ++KK+ Sbjct: 29 RKLCQHGIEALRPQRVNDRWRKPMVSRRVAADLRKAAIRSGTYGTFDAETGIGWDPIWDSPQRRRGVDEILGSNQSKIHSI------RPPKEHKHDRTREARAQQIEALLAQADDKIEEFRLEIEAKKPKPGIEEVFKKM 162
BLAST of NO30G00990 vs. NCBI_GenBank
Match: XP_002292832.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90028.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 80.1 bits (196), Expect = 6.500e-12 Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = 0 Query: 3 RRLLKHGAEAFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQ-DTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIESLYKK 142 R+L +HG EA +P V+ +W++P +S RVAA LRK A+ GTYG +T A + +RP K KRERTRE R +KIE +A D K+ ++++ ++ KPK GIE +K+ Sbjct: 6 RKLCQHGIEALRPQKVNNKWRKPAVSPRVAADLRKLAIKAGTYGKFDAETGVGWDPRWDSSKAKFTANNDEADSIDILGSNRGAIQSIRPPKETKRERTRETRAEKIEGLLAQADEKIEEYRKEQEAKKPKPGIEEEFKR 145
BLAST of NO30G00990 vs. NCBI_GenBank
Match: GAX94727.1 (Hypothetical protein PINS_002635 [Pythium insidiosum]) HSP 1 Score: 71.2 bits (173), Expect = 3.000e-9 Identity = 45/139 (32.37%), Postives = 65/139 (46.76%), Query Frame = 0 Query: 1 MSRRLLKHGAE---AFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIE 137 M R L AE A KPH VDG+W++PL+S+R A ++K A NG G + E V+RP K H ER ER +K++ A+A M +K+A+HK+ +K KP G++ Sbjct: 4 MQRFLRMSAAEAEAAMKPHLVDGKWKQPLLSRRKVAMVKKHAAKNGLVGQWVE---------------------GQGGWLPAWDRAEKHTVMRPPKGHINERNEFERVKKVQAALAAMPSKIAEHKKIVKQAKPLKGLD 121
BLAST of NO30G00990 vs. NCBI_GenBank
Match: XP_009530788.1 (hypothetical protein PHYSODRAFT_346993 [Phytophthora sojae] >EGZ13359.1 hypothetical protein PHYSODRAFT_346993 [Phytophthora sojae]) HSP 1 Score: 69.3 bits (168), Expect = 1.100e-8 Identity = 39/125 (31.20%), Postives = 62/125 (49.60%), Query Frame = 0 Query: 12 AFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIE 137 A KP VDG+W++PLIS R A ++K A NG G+ ++ + V+RP K HK +R ER +K++ A+A M +K+A+HK+++K KP G++ Sbjct: 18 AMKPRLVDGKWKQPLISGRKIAMVKKHAFRNGLVGTWEE---------------------GKGGWLETWDRPQKHHVMRPLKGHKNQRNEFERVKKVQAALAAMPSKIAEHKKAVKQAKPLKGLD 121
BLAST of NO30G00990 vs. NCBI_GenBank
Match: KUF86838.1 (hypothetical protein AM587_10000671 [Phytophthora nicotianae] >KUF95958.1 hypothetical protein AM587_10010808 [Phytophthora nicotianae] >KUF96501.1 hypothetical protein AM588_10006718 [Phytophthora nicotianae]) HSP 1 Score: 68.6 bits (166), Expect = 2.000e-8 Identity = 39/125 (31.20%), Postives = 61/125 (48.80%), Query Frame = 0 Query: 12 AFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIE 137 A KP VDG+W++PLIS R A ++K A NG G+ ++ + V+RP K HK +R ER +K++ A+A M K+A+HK+++K KP G++ Sbjct: 18 AMKPRLVDGKWKQPLISGRKIAMVKKHAARNGLVGTWEE---------------------GKGGWLETWDRPQKHHVMRPLKGHKNQRNEFERVKKVQAALAAMPTKIAEHKKAVKQAKPLKGLD 121
BLAST of NO30G00990 vs. NCBI_GenBank
Match: OQS05878.1 (hypothetical protein THRCLA_20509 [Thraustotheca clavata]) HSP 1 Score: 67.8 bits (164), Expect = 3.300e-8 Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 0 Query: 10 AEAFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIE 137 A+A +P + GRW +P +S R A ++K A ANGT+GS T T + V+RP K ER EER +KI+TAMAGMD K+ +H+ +L KP G+E Sbjct: 21 AKALRPSLIKGRWIKPQLSLRQQATIKKVAQANGTFGSW--TPGTGGWLPQWDLP-------------------KKHTVMRPPKGTANERREEERVKKIQTAMAGMDKKIEEHRAALIKAKPIKGLE 126
BLAST of NO30G00990 vs. NCBI_GenBank
Match: OQR99791.1 (hypothetical protein ACHHYP_04421 [Achlya hypogyna]) HSP 1 Score: 66.6 bits (161), Expect = 7.400e-8 Identity = 43/126 (34.13%), Postives = 62/126 (49.21%), Query Frame = 0 Query: 11 EAFKPHFVDGRWQRPLISKRVAARLRKEALANGTYGSLQDTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPRVLRPAKLHKRERTREERFQKIETAMAGMDAKVAQHKESLKSLKPKVGIE 137 +A +P V GRW +P++S R A ++K A+ANGT G+ TA T + V+R K H ER +R +KI+TAMAGMD K+ +H+ +L KP G+E Sbjct: 14 KALRPTLVKGRWIKPMLSLRQQANVKKVAIANGTVGTW--TAGTGGWLPAWDLP-------------------KQHNVMRTPKGHANERREADRVKKIQTAMAGMDKKIEEHRAALLKAKPIKGLE 118 The following BLAST results are available for this feature:
BLAST of NO30G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 16
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00990 ID=NO30G00990|Name=NO30G00990|organism=Nannochloropsis oceanica|type=gene|length=1263bpback to top protein sequence of NO30G00990.1 >NO30G00990.1-protein ID=NO30G00990.1-protein|Name=NO30G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=151bpback to top Synonyms
Publications
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