NO03G05730, NO03G05730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05730 vs. NCBI_GenBank
Match: EWM30047.1 (Dihydrodipicolinate reductase [Nannochloropsis gaditana]) HSP 1 Score: 439.5 bits (1129), Expect = 7.700e-120 Identity = 215/253 (84.98%), Postives = 233/253 (92.09%), Query Frame = 0 Query: 24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGSEKKVYNMIDVLKAGAM 277 +EE V+VDDGEGG+ QT+RLVKGP+TG GDEECDARLQGL+AGYR+S TRLIAVDYTHPTAVNPNG LYARHK+DFVMGTTGGDR+KL+ DV GIYAVIAPNMAKQIVALQAGLETMA TFPGAFEGY L VVESHQSSKADTSGTAKALI+SFG L+GK Y VEDVI MIRDREGQL FGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRR+YAEGTVDAL +LA+Q G +KKV+NM+DVLKAGAM Sbjct: 81 DEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGPDKKVFNMVDVLKAGAM 333
BLAST of NO03G05730 vs. NCBI_GenBank
Match: KOO33395.1 (dihydrodipicolinate reductase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 272.3 bits (695), Expect = 1.600e-69 Identity = 153/265 (57.74%), Postives = 184/265 (69.43%), Query Frame = 0 Query: 23 KEEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFG---------VPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277 KE V VDDG GG TVRL G E D + + A Y S + L+ +D+THP+AVN N + YA HKL FVMGTTGGDRE LM A G YAVIAPNMAKQIVALQA LE MA FPG+F+GY+L+VVESHQ+SKADTSGTAKA+ +S +L G++ + I +R+ QL G VPEA L GHAFHTY L+S D +VEFQFRHNV+GR YAEGTVDA+VFLA+Q A +EK+VY+M+DVL+AGAM Sbjct: 43 KEGGEVVVDDGCGGPAVTVRLY-------GTEARDELAERVKAEYPQSGS-LVCIDFTHPSAVNGNAEWYAAHKLPFVMGTTGGDREALMKCTRASGTYAVIAPNMAKQIVALQAALEQMARDFPGSFDGYSLSVVESHQTSKADTSGTAKAISASLARLSGESDFTPERIVRVREPAEQLAGGGPSHTGVSPVPEAALSGHAFHTYSLVSGDKAVEFQFRHNVLGRSTYAEGTVDAVVFLARQMVAKAEKRVYDMVDVLRAGAM 299
BLAST of NO03G05730 vs. NCBI_GenBank
Match: EJK45557.1 (hypothetical protein THAOC_35827 [Thalassiosira oceanica]) HSP 1 Score: 265.4 bits (677), Expect = 2.000e-67 Identity = 143/256 (55.86%), Postives = 176/256 (68.75%), Query Frame = 0 Query: 24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDS--KTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS-EKKVYNMIDVLKAGAM 277 E +V V D G+ VRL+ P +G EE ++ LAG R++ K ++A+DYTHP+AVN N YA + L FVMGTTGGDR+KLMDDV + +AVIAPNM KQIVA+QAGLE +A FP AF GY L V ESHQ +KADTSGTAKA+I S L +++E I M+RD E L FGV E L GHAFHTY L SPD SV+F+ +HNV GR VYAEGT DA+ FLA + GS E KVY+MIDVL++G + Sbjct: 97 EPSTVTVTDDVTGRSADVRLI--PANEDGREE----IKSSLAGIREAAGKENVLAIDYTHPSAVNGNAVFYAENDLPFVMGTTGGDRDKLMDDVVSRKAFAVIAPNMGKQIVAMQAGLEDLATKFPSAFAGYKLKVTESHQKTKADTSGTAKAVIDSLKTLSDDDFNIEKDIEMLRDDESSLAFGVSEDALNGHAFHTYTLTSPDKSVQFELKHNVEGRTVYAEGTADAVKFLATKVGSGEGKVYSMIDVLRSGGL 346
BLAST of NO03G05730 vs. NCBI_GenBank
Match: CBN74026.1 (dihydrodipicolinate reductase [Ectocarpus siliculosus]) HSP 1 Score: 263.5 bits (672), Expect = 7.600e-67 Identity = 142/251 (56.57%), Postives = 171/251 (68.13%), Query Frame = 0 Query: 28 VEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS--EKKVYNMIDVLKAGAM 277 V V D +GG TV LV + E CD + L R S ++ VDYT P+AVN N + YA+H L+FVMGTTGGDR+ LM G+YAVIAPNM KQIVALQ+ ++ MA FPG+F Y L + ESHQS+K DTSGTAKAL + F KL + Y V+ I +RD EGQL FGVPE L GHAFHTY L S DG+VEFQFRHNV GR +YAEGT DA+ FLA +AGS +K+VYNM+DVL+ G M Sbjct: 90 VSVADPKGGDPTTVTLV----PSDDAEGCDKAVAELKR--RCSGGSVVVVDYTTPSAVNANAEFYAKHGLNFVMGTTGGDRDALMSVTEGSGVYAVIAPNMGKQIVALQSAIDNMAREFPGSFGDYKLEITESHQSAKVDTSGTAKALAADFAKLTAEDYDVKS-INKVRDTEGQLAFGVPEEHLAGHAFHTYSLKSNDGTVEFQFRHNVCGRLMYAEGTADAVEFLAGKAGSGADKRVYNMLDVLREGGM 333
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_002291387.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91494.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 258.8 bits (660), Expect = 1.900e-65 Identity = 139/255 (54.51%), Postives = 172/255 (67.45%), Query Frame = 0 Query: 24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQA--GSEKKVYNMIDVLKAGAM 277 E ++ V D VRL+ P T +G E + L GL D ++A+DYTHP+AVN NG YA +KL FVMGTTGGDR+ L+ D+ + +AVIAPNM KQIVA+QAGLE +AA FP AF GY L V ESHQ +KADTSGTAKA+I+S KL + +E I M+RD E L FGVP+ L GHAFHTY L S DGSV+F+ +HNV GR VYAEGT DA+ FLA + G +VY+MIDVL+AGA+ Sbjct: 49 ESSTITVYDDVTDTSANVRLI--PATDDGRMEIVSSLAGLRESVGDK--NVLAIDYTHPSAVNANGVFYADNKLPFVMGTTGGDRDLLLSDMESREAFAVIAPNMGKQIVAMQAGLEDLAAKFPSAFAGYKLEVTESHQKTKADTSGTAKAVIASLKKLSDDDFDMEQDIEMLRDDESSLAFGVPKEALNGHAFHTYTLTSADGSVQFELKHNVSGRTVYAEGTADAVKFLASKVFEGKGGRVYSMIDVLQAGAL 299
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_002177788.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50602.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 255.0 bits (650), Expect = 2.700e-64 Identity = 140/253 (55.34%), Postives = 170/253 (67.19%), Query Frame = 0 Query: 24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGSEK--KVYNMIDVLKAG 275 E + V D G +VRLV + D E L +AG + + RL+A+DYTHP+AVN N K Y + FVMGTTGGDR++LM DV G + VIAPNM KQIVA+QA LE +A +P AFEGY L VVESHQ +KADTSGTAKA+ISS L G + D I+MIRD + L FGVPE + GHAFHTY L SPDGSV FQ +HNV GR VYAEGT DA+ FLAK+ +EK +V+NMI+VL+ G Sbjct: 36 EASTFIVTDTVTGTSSSVRLVP-----SSDTE---ELVSAVAGMQTASERLLAIDYTHPSAVNGNAKFYVEQNIPFVMGTTGGDRDELMKDVE--GHFCVIAPNMGKQIVAMQAALEDLANKYPSAFEGYQLEVVESHQKTKADTSGTAKAVISSIKTLAGDEKYSNDDIKMIRDEKEALAFGVPEDAMMGHAFHTYTLTSPDGSVSFQLQHNVAGRTVYAEGTADAVKFLAKKMKTEKIPRVFNMINVLEEG 278
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GAX15254.1 (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris]) HSP 1 Score: 254.6 bits (649), Expect = 3.500e-64 Identity = 137/254 (53.94%), Postives = 172/254 (67.72%), Query Frame = 0 Query: 24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS-EKKVYNMIDVLKAGAM 277 E ++ V D G+KQ V+L+ T +LQ +AG + S L+A+DYTHP+AVN N + Y + K+ FVMGTTGGDR++LM DV G + VIAPNM KQIVA+QA LE +A FPGAF+GY L+V ESHQ +KADTSGTAKA+I S KL + I+MIRD + + FGVP + GHAFHTY L S DGSV FQ +HNV GR +YAEGT DA+ FL+KQ S E +V+NMIDVL+ GAM Sbjct: 108 EPSTISVFDTVTGKKQDVKLIPSKET--------EKLQASIAGLKTS-GNLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSVTESHQKTKADTSGTAKAVIESIEKLASDDNFTIEDIKMIRDDDEAVAFGVPPDAIKGHAFHTYTLTSADGSVSFQLQHNVAGRTIYAEGTADAVKFLSKQIHSGEPRVFNMIDVLEKGAM 350
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GAX19853.1 (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris]) HSP 1 Score: 249.6 bits (636), Expect = 1.100e-62 Identity = 137/254 (53.94%), Postives = 172/254 (67.72%), Query Frame = 0 Query: 24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS-EKKVYNMIDVLKAGAM 277 E ++ V D +KQ V+L+ +E + +LQ +AG + S L+A+DYTHP+AVN N + Y + K+ FVMGTTGGDR++LM DV G + VIAPNM KQIVA+QA LE +A FPGAF+GY L+V ESHQ +KADTSGTAKA+I S KL + I+ IRD E + FGVP + GHAFHTY L S DGSV FQ +HNV GR +YAEGT DA+ FL+KQ S E +V+NMIDVLK GAM Sbjct: 79 EPSTISVYDTVTEKKQDVKLIP-------SKEIE-KLQASIAGLKAS-GNLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSVTESHQKTKADTSGTAKAVIESIEKLASDDNFTIEDIKRIRDDEEAVAFGVPPDAIKGHAFHTYTLTSADGSVSFQLQHNVAGRTIYAEGTADAVKFLSKQIHSGEPRVFNMIDVLKEGAM 321
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GBG31187.1 (4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 248.4 bits (633), Expect = 2.500e-62 Identity = 139/256 (54.30%), Postives = 175/256 (68.36%), Query Frame = 0 Query: 24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLL-GKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277 ++ +VE DD G TV LV GP E + +L+ L R ++A+D+THP+AVN N +LY + L FVMGTTGGDRE L VA G++A+IAPNM KQIVA QA ++TMA+T+PGAF GY L + ESHQS KADTSGTAKA++ KL G + VED I+ +R+ E Q FGVP L GHA+HTY L S DGSV F+F+HNV GRR YAEG VDA+ FLA + G++KK+Y+MIDVLKAG M Sbjct: 49 KDVTVEKDD---GGSVTVNLV-GP-----GSEAETQLKEALEKGRSEGKIVVAIDFTHPSAVNRNAELYVKLGLPFVMGTTGGDREALQKVVADNGLFALIAPNMCKQIVAFQAMMDTMASTYPGAFGGYGLEITESHQSGKADTSGTAKAMVEYLNKLKGGDPFDVED-IKKLRESEAQQAFGVPAEALEGHAWHTYTLKSGDGSVVFEFKHNVCGRRTYAEGVVDAVNFLAARINEGADKKLYDMIDVLKAGEM 294
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GAQ84419.1 (dihydrodipicolinate reductase [Klebsormidium nitens]) HSP 1 Score: 243.8 bits (621), Expect = 6.200e-61 Identity = 132/244 (54.10%), Postives = 165/244 (67.62%), Query Frame = 0 Query: 44 VKGPLTGNGDEEC-DARLQGLLAGYRDS--------KTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQA--GSEKKVYNMIDVLKAGAM 277 + GP GN C +Q + A RDS +I VDYT P AVN N + Y + FVMGTTGGDR KL+D V G YAVIAP M KQ+VA QA ++ MA FPGAF GYTL V ESHQSSK DTSGTAKA++ F K LG ++V+++ R+ E VPE LGGHAFHTY+LLSPDG+V F+F+HNV+GR +YA+GTVDA++FLAK+ G+++K+YNMIDVLK G+M Sbjct: 54 ITGPKMGNSRVACGGVAVQIIGAEERDSVFDRVLNEYPNVIVVDYTLPAAVNSNAEYYISRGVPFVMGTTGGDRTKLIDTVKKAGTYAVIAPQMGKQVVAFQAAMDIMAQNFPGAFAGYTLKVTESHQSSKVDTSGTAKAIVEYFQK-LGVKFNVDEIERVRDPSEQVRRMHVPEDYLGGHAFHTYKLLSPDGTVAFEFQHNVMGRSIYAQGTVDAVLFLAKKVREGADQKLYNMIDVLKEGSM 296 The following BLAST results are available for this feature:
BLAST of NO03G05730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05730 ID=NO03G05730|Name=NO03G05730|organism=Nannochloropsis oceanica|type=gene|length=2531bpback to top protein sequence of NO03G05730.3 >NO03G05730.3-protein ID=NO03G05730.3-protein|Name=NO03G05730.3|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top protein sequence of NO03G05730.2 >NO03G05730.2-protein ID=NO03G05730.2-protein|Name=NO03G05730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=291bpback to top protein sequence of NO03G05730.1 >NO03G05730.1-protein ID=NO03G05730.1-protein|Name=NO03G05730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bpback to top Synonyms
Publications
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