NO03G05600, NO03G05600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05600 vs. NCBI_GenBank
Match: EWM30033.1 (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 357.1 bits (915), Expect = 4.600e-95 Identity = 162/246 (65.85%), Postives = 197/246 (80.08%), Query Frame = 0 Query: 2 QVTRVYDSEHNGNGFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDGCVHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLALSYPVTQTTTFGQPRVGNKEFSSFF-NQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVICDPTGEDKHCSNQYYIDANINDHLSYLGVLFGAEELEGRMQEISSLRGVEVNEGGRVAA 247 +V RVYD+ HNGNGFVGWDP +GV++V+FAGTDTTS+ NWIDD+D + TPWP +GC C+VHAGFL TY AL+ QL P ++AL+ HPQAP+W+TGHSLGAALAVLCM+DLL+LSYPV FGQPRVGN+ FSSF Q+ S+ F+RLVHHRDPVPHLPP S GFHHSPFEVFY+++E+ Y ICD TGEDKHCS+ Y ID +I DHL+YLGVLFG EE+EGR+QE+ G E+ V+A Sbjct: 105 EVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLLSLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIKDHLNYLGVLFGGEEVEGRLQELMHSTGWEMEASVLVSA 350
BLAST of NO03G05600 vs. NCBI_GenBank
Match: EWM26431.1 (lipase [Nannochloropsis gaditana]) HSP 1 Score: 251.5 bits (641), Expect = 2.700e-63 Identity = 112/213 (52.58%), Postives = 157/213 (73.71%), Query Frame = 0 Query: 9 SEHNGNGFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDGCVHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLALSYPVTQTTTFGQPRVGNKEFSSFFNQTIIPSI--PFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVICDPTGEDKHCSNQYYIDANINDHLSYLGVLFG 220 S +G+GFVG++ +G ++VAFAGT + W+ ++D +P DGC C+VH GF Y L+SQ+ +Q L+QHP APIW+TGHSLGAA+AV CM+DL++LSY V + FGQPRVGNK+F++F ++ S+ P +RLVHHRDPVPHLPP++ GFHH PFEVFY+ED++SY++C+ +GED CS+Q+ +D ++ DHL+YLGV G Sbjct: 367 SAPDGDGFVGYNSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLMSLSYNVRRVVNFGQPRVGNKQFATFV-ASLAESLDFPLYRLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDLQCSDQFLVDLDVADHLNYLGVPMG 578
BLAST of NO03G05600 vs. NCBI_GenBank
Match: CBN76735.1 (lipase [Ectocarpus siliculosus]) HSP 1 Score: 193.0 bits (489), Expect = 1.100e-45 Identity = 101/213 (47.42%), Postives = 133/213 (62.44%), Query Frame = 0 Query: 23 KGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDG-CVHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLA---------LSYPVTQTTTFGQPRVGNKEFSSFFNQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVICDPTGEDKHCSNQYY-IDANINDHLSYLGVLFGAEELE 225 K I++ F+GTD +S+KNWIDD+++ P G C C+VH GFLA Y ++ Q+ AI ++ +P I ITGHSLGAALAVLC LDL S FG PRVGN+ F++ T P + FRLVHHRDPVPHLP ++ G+HH P EVFY+ED+SSY +C+ +GED CSNQ++ I NI DHL YL V + ++ Sbjct: 150 KARIVITFSGTDPSSVKNWIDDLEATTVPNTYGGLCEQCQVHRGFLAAYDLVKDQVRYAIGQHMQYNPHVQILITGHSLGAALAVLCFLDLRVNRGLGQGPNSSVSFAPIYLFGSPRVGNEAFATL---TTRPGVSIFRLVHHRDPVPHLPLEAWGYHHPPTEVFYTEDQSSYQVCNNSGEDDKCSNQFWAIFGNIEDHLWYLVVNYSTAYMQ 359
BLAST of NO03G05600 vs. NCBI_GenBank
Match: EWM22078.1 (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 175.3 bits (443), Expect = 2.500e-40 Identity = 100/257 (38.91%), Postives = 139/257 (54.09%), Query Frame = 0 Query: 1 MQVTRVYDSEHNGNGFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDGCVHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLL-ALSYPVTQTTTFGQPRVGNKEFSSFFNQTI-IPSIPFFRLVHHRDPVPHLPP-----QSLGFHHSPFEVFY----------------------------SEDES-SYVICDPT-GEDKHCSNQYYIDANINDHLSYLGVLFGA 221 + VT V+ +G+GFVG D + V+ + F GTD +++N+ DD+D I +P GC C VH GF TY L+ Q+L + HP A + ITGHSLG A+AV L+L+ +L V TFGQPRVGN F +F ++ + + S FR+ HRDP+ HLPP +S+GF H P EVFY S+ ES Y++CDP GED S+++ +D N DH++YLG F A Sbjct: 133 LNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFP--GCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTA 387
BLAST of NO03G05600 vs. NCBI_GenBank
Match: KOO25738.1 (lipase family protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 173.7 bits (439), Expect = 7.200e-40 Identity = 88/207 (42.51%), Postives = 135/207 (65.22%), Query Frame = 0 Query: 15 GFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILT-PWPEDGCVHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLA----LSYPVTQTTTFGQPRVGNKEFSSFFNQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVICDPTGEDKHCSNQYYIDANINDHLSYLGV 217 GFVG P I+V+F G+D +++NWID+ID T +P+ C CRVH GF + +++ ++ +Q L E + A I++TGHSLGAA+A LC ++L A L +P+ T+G+PRVGN +F+ F+ S +R+ H RD VPHLPP++ GFHH+ EV+Y+ED+ +Y +CD +GED C++Q + +I+DHL Y+G+ Sbjct: 78 GFVGQAPGND-IVVSFRGSD--NIRNWIDNIDITKTDAYPK--CDGCRVHTGFYKAWNSVKDDVVKEVQRLHEANSSANIFVTGHSLGAAVAALCAVELGASSQSLGFPIAGVYTYGEPRVGNDQFAKFYMTGTQVS---WRVTHWRDIVPHLPPEAFGFHHTATEVWYTEDQKNYTVCDGSGEDPTCADQLFEAVSIDDHLQYMGI 276
BLAST of NO03G05600 vs. NCBI_GenBank
Match: XP_001567267.1 (putative lipase [Leishmania braziliensis MHOM/BR/75/M2904] >CAM42695.1 putative lipase [Leishmania braziliensis MHOM/BR/75/M2904]) HSP 1 Score: 162.9 bits (411), Expect = 1.300e-36 Identity = 92/255 (36.08%), Postives = 140/255 (54.90%), Query Frame = 0 Query: 2 QVTRVYDSEHNGN-GFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDGC-VHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLALSYPVTQTT----------------------TFGQPRVGNKEFSSFFNQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVIC--DPTGEDKHCSNQYYIDANINDHLSYLGVLFGAEELEGRMQEI 231 +V VYD+ GN G+ G D D G I+V F GT T+ NWI D+D P+P C +CR+H GF Y +++ QL+ + ++LE+HP ++ITGHSLG A+A+L +D + ++ TFG+PRVGN+ F++ ++ +++ + FR+ H +DPVPHLPP S + H P EV+Y D+ + ++C + + ED CSN Y + DHL YLG+ E M+EI Sbjct: 96 RVFNVYDNTSTGNFGYSGIDNDAGRIVVVFRGTHNTA--NWIQDLDFWSIPYPNPSCGNNCRIHRGFYRAYSSVRYQLIYDVLSMLERHPSYTLFITGHSLGGAMALLAAIDFTTWNVSKSEVVDNSVQPSSAAPKPSHLAPVMLYTFGEPRVGNQYFTN-WSTSVLANEKQFRITHAKDPVPHLPPLSWSYVHVPQEVWYPADDEAVLLCQDNSSTEDPLCSNSVYA-TRVADHLIYLGICTRCECTAAEMEEI 346
BLAST of NO03G05600 vs. NCBI_GenBank
Match: XP_001748117.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ87174.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 162.5 bits (410), Expect = 1.600e-36 Identity = 88/213 (41.31%), Postives = 127/213 (59.62%), Query Frame = 0 Query: 9 SEHNGNGFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDGC-VHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLALSYPVTQTT--TFGQPRVGNKEFSSFFNQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYS---EDESSYVICDPTGEDKHCSNQYYIDANINDHLSYLG 216 SE + NG++G D IIVAF GT L WIDD+D G +VH+GF Y ++ + + L +P+ I +TGHSLGAALA +C LD L++ +P + T+GQPRVGN+ F+ F+ + +R+ H+ DPVPHLP +S+GF+H EV+Y E +SS +CD +GED +CSNQ++ D ++DHL+YLG Sbjct: 60 SETDTNGYIGIDEAGKRIIVAFQGTH--DLTQWIDDLDFFKADLQYPGASSDVKVHSGFYKAYRQVKQNVDQVVNQTLFNNPEYTILVTGHSLGAALAAMCSLD-LSIGHPQARILHYTYGQPRVGNQAFAQFYESHNLAQ--HYRMTHNEDPVPHLPLESMGFYHISTEVYYGEKFEGQSSLKVCDGSGEDPNCSNQHWTDLKVSDHLNYLG 267
BLAST of NO03G05600 vs. NCBI_GenBank
Match: XP_001017212.1 (lipase family protein [Tetrahymena thermophila SB210] >EAR96967.1 lipase family protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 161.4 bits (407), Expect = 3.700e-36 Identity = 91/213 (42.72%), Postives = 129/213 (60.56%), Query Frame = 0 Query: 3 VTRVYDSEHNGNGFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDGCVHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLALSYPVTQTTTFGQPRVGNKEFSSFFNQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVICDPTGEDKHCSNQYYIDANINDHLSYLG 216 V Y+S H G+ +D + IIVAF T TT+L NW+ D D +P CV C+VH GFL + LQ+ +L + L++++P A + + GHSLG ALA+L +D+ V TFGQPRVGNKEF++FF+ I S +RL+H RD VPHLP Q GF+H EV+Y+++ +SY +C+ EDK CS++ ++DH YLG Sbjct: 73 VKAFYNSTHQIQGYTAYDSMENNIIVAFRAT-TTNL-NWLLDFDFFKIKYPT--CVGCQVHRGFLIAWRDLQNSVLKSTSDLVQKYPNATLSVIGHSLGGALAILGAIDIHLSVKAVDFVYTFGQPRVGNKEFAAFFDLNIGNS---YRLIHDRDLVPHLPLQKQGFYHQGTEVWYNQNSTSYTVCEKYLEDKSCSDRLK-SYTMDDHDLYLG 277
BLAST of NO03G05600 vs. NCBI_GenBank
Match: AJT59458.1 (phospholipase a1 [Leishmania braziliensis]) HSP 1 Score: 161.0 bits (406), Expect = 4.800e-36 Identity = 91/255 (35.69%), Postives = 138/255 (54.12%), Query Frame = 0 Query: 2 QVTRVYDSEHNGN-GFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSILTPWPEDGC-VHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLALSYPVTQTT----------------------TFGQPRVGNKEFSSFFNQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVIC--DPTGEDKHCSNQYYIDANINDHLSYLGVLFGAEELEGRMQEI 231 +V VYD+ GN G+ G D D G I+V F GT T +NWI D+D P+P C +CR+H GF Y +++ QL+ + ++LE+HP ++ITGHSLG A+A+L +D + + TFG+PRVGN+ F++ ++ +++ + FR+ H +DPVPHLPP S + H P EV+Y D+ + ++C + + ED CSN Y + DHL Y G+ E M+EI Sbjct: 96 RVFNVYDNTSTGNFGYSGIDNDAGRIVVVFRGTHNT--ENWIQDLDFWSIPYPNPSCGNNCRIHRGFYRAYSSVRYQLIYDVLSMLERHPSYTLFITGHSLGGAMALLAAIDFATWNVSKPEVVDNSVQPSSAAPKPSHLAPVMLYTFGEPRVGNQYFTN-WSTSVLANEKQFRITHAKDPVPHLPPLSWSYVHVPQEVWYPADDEAVLLCQDNSSTEDPLCSNSVYA-TRVADHLIYFGICTRCECTAAEMEEI 346
BLAST of NO03G05600 vs. NCBI_GenBank
Match: GAY04418.1 (Hypothetical protein PINS_012234 [Pythium insidiosum]) HSP 1 Score: 160.6 bits (405), Expect = 6.300e-36 Identity = 89/208 (42.79%), Postives = 128/208 (61.54%), Query Frame = 0 Query: 12 NGNGFVGWDPDKGVIIVAFAGTDTTSLKNWIDDIDSI-LTPWPEDGCVHCRVHAGFLATYGALQSQLLPAIQALLEQHPQAPIWITGHSLGAALAVLCMLDLLALSY-PVTQTTTFGQPRVGNKEFSSFFNQTIIPSIPFFRLVHHRDPVPHLPPQSLGFHHSPFEVFYSEDESSYVICDPT-GEDKHCSN--QYYIDANINDHLSYL 215 N G VG+ D I+VAF G + + NWID++ + +P+ + RVH GF Y ++ +Q++PA++ LL+ HP AP+ +TGHSLG A+ LC DL L + PV+ TFG+PRVGN F ++ +P++ FR+ H RD VPHLPP +G+ H P EVFY E +S+V+CDP GED +CSN + ++ DHL YL Sbjct: 4 NFQGLVGFSNDANAIVVAFRG--SMDITNWIDNLTFVKKKAYPK--YPNVRVHEGFFWVYMSVANQVVPAVKKLLKIHPNAPVIVTGHSLGGAVTALCAFDLALLHHIPVSAVYTFGEPRVGNDAFGVELHRA-VPAV--FRVTHFRDVVPHLPPTWIGYRHGPQEVFYDEYTTSFVLCDPNDGEDLNCSNACSPFGCTSVVDHLMYL 204 The following BLAST results are available for this feature:
BLAST of NO03G05600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05600 ID=NO03G05600|Name=NO03G05600|organism=Nannochloropsis oceanica|type=gene|length=2320bpback to top protein sequence of NO03G05600.4 >NO03G05600.4-protein ID=NO03G05600.4-protein|Name=NO03G05600.4|organism=Nannochloropsis oceanica|type=polypeptide|length=445bpback to top protein sequence of NO03G05600.3 >NO03G05600.3-protein ID=NO03G05600.3-protein|Name=NO03G05600.3|organism=Nannochloropsis oceanica|type=polypeptide|length=389bpback to top protein sequence of NO03G05600.2 >NO03G05600.2-protein ID=NO03G05600.2-protein|Name=NO03G05600.2|organism=Nannochloropsis oceanica|type=polypeptide|length=251bpback to top protein sequence of NO03G05600.1 >NO03G05600.1-protein ID=NO03G05600.1-protein|Name=NO03G05600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bpback to top Synonyms
Publications
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