NO03G05400, NO03G05400 (gene) Nannochloropsis oceanica

Overview
NameNO03G05400
Unique NameNO03G05400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2582
Alignment locationchr3:1539861..1542442 -

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Properties
Property NameValue
DescriptionPeptidase s8 and s53
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1539861..1542442 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004672protein kinase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
Homology
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BLAST of NO03G05400 vs. NCBI_GenBank
Match: EWM27126.1 (peptidase s8 and s53, partial [Nannochloropsis gaditana])

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-12
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0 
Query:   60 GAWFCQFPRSSRANDAYTQQNCRLACDGSGVNKYPRCCVEAVVGNVCNDEEFKAAQQEGVQC 122
            G W+CQFPRS+R+NDA T +NC ++CD SG  K P CC    VG+VCNDEE  AAQ  GV C
Sbjct:  415 GDWYCQFPRSTRSNDAQTIRNCLVSCDDSGFLKNPVCCPPLTVGSVCNDEEASAAQANGVAC 476
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BLAST of NO03G05400 vs. NCBI_GenBank
Match: XP_005852545.1 (subtilisin-like serine peptidase [Nannochloropsis gaditana CCMP526] >EKU23286.1 subtilisin-like serine peptidase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 70.5 bits (171), Expect = 2.700e-8
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0 
Query:   60 GAWFCQFPRSSRANDAYTQQNCRLACDGSGVNKYPRCCVEAVVGNVCNDEEFKAAQQEGVQCEPET 126
            GAW+CQ PRSSRA + +T +NC  +CD +G  K P CC +A  G+VC+ +E  AA   G++C+  T
Sbjct:  886 GAWYCQSPRSSRAGEVFTTENCDQSCDNNGFLKEPVCC-DASAGSVCSAQEIAAAAAVGLECDAAT 950
The following BLAST results are available for this feature:
BLAST of NO03G05400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM27126.11.400e-1259.68peptidase s8 and s53, partial [Nannochloropsis gad... [more]
XP_005852545.12.700e-846.97subtilisin-like serine peptidase [Nannochloropsis ... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05400.1NO03G05400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05400.1NO03G05400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05400 ID=NO03G05400|Name=NO03G05400|organism=Nannochloropsis oceanica|type=gene|length=2582bp
CTTGTAAACCGACGTTGAGCCGTTGCACTCATGGTTCCCTCCTCGTTGCC
TAGCTGCCAGCTTAGCTTGGCCACGATTTTGAAAGATAGCACGCCGGCAT
TTCCTCTTCACGTAGCAAAGAGGCTTGCATGGGTTCATTGCCGTCCAATG
CCGCAAGCACTCACAAACAATAGGCTCATGCAATGAAGACGGTCTCCGCA
CCACCACGAGCAAGGGCAAGAAATAGGAGGAGAGGCCAGCGACGACTTTG
TGTCCCATATCTTCTCCCGCTCCCCCTCCTCATGTTCCTATTCCTCGCAC
TAGCCCCCGTCTCCGCCTACCAGTCTCTACCACGTCGTGAGCAGCAAGGG
GTCGCCATGGGTGCCTGGTTTTGCCAATTTCCTCGCTCCAGCCGTGCCAA
CGACGCCTACACTCAGCAAAATTGTCGCTTAGCCTGTGATGGCAGCGGAG
TCAACAAGTACCCCAGATGTTGTGTGGAGGCAGTGGTCGGAAACGTGTGC
AACGACGAGGAATTCAAGGCGGCGCAACAGGAGGGAGTGCAGTGCGAGCC
CGAAACAATGACAGACTGCACGACAAGTGCTCCAGCTACTGAACCAACCA
AATCTGAACCACCTTCATCTGTGACCGAAGTTTCTGCGTCTACGACTGCG
TCACCTACAACCCTTTTTTCGCCACACCCCTCCCGTGCCCCTACTCGTGG
TCCTACCTTCACACCGCACGTCGTCCCCGCACAGGACAAGGACGAGGAAA
AAGAAGAGGTTTCTGCAGACATAGACAAATCTAGCAAGAAAACGCACATT
GTTGTGGTCGTTGGCGTGGGGGGCCTTCTGCTTGCGCTCTCTTGTTTCTT
CATATGCTGCCTGAGCATCAGGCGGTCGAGCAGGCGGCAGCAGCAAGTAC
GAGGAGGAGGGGGAGGGGGAGGGGGGGGCATCAACAACCTACAGGCCCCA
CCACTGGCTGTGGCCGCGTTATACTATGACGAGGATGACAACAACGCTGC
TGGTGGTAGCCTTGGAGTGCACAGCCCCGTCACTTATGATTCGAACGGGG
CCTTGATTGGGCAGCCTTTGGAAAGTCATACATCTCCTTTGCCTTCTCCT
TCCGCCCCTCCTTCAGCGCCCCCACCCGTCACAACGTTTCCTGCAGTATC
TCCTCTTCCTATTACCGTATCACCGCCCACCTCTCCTGCATTCGATCCGT
TTGGCGTCGCGGCGATTGACTACATGGGAGTGTCGGGGGGGTGGCCACCC
ACACCCACGGCCCTCAGTAAGGTAAGGGCAGCAGCAGCAGCAGCAGCGGC
AGAAACAACAAGTAGCTCCAATCTCCCACCACCAGCACCAGTATTTACAC
AAACACGAAGAAATGGAGCTCGGGTGACAGCAGCTGGCTCGCGGTTGTCG
TTCACGACGGACGGATATGCGGACTTGATGCGCTTGCTCGTGTCGTCGTC
GTCCCCCTCCTCCTCCTCCTCCTCCTCGTCGTCCTCCTCCAACACTCTCC
TCCTTCATGCCATCGACTTTCGCCTTAATCCACTCCCCTACCGCCTTCAG
GCCCATGAGGCTCTTTTTCGAGGCCGCTTCGGGTGTTCGCTGCCCCCTCC
CTTGCCAGTGGTAGCAGTAGCAAGCTCAATCGCCCAGACCGGGAGCAATC
GAATCATCGTCGTCCCCGCCACAGGAAATCACAGCGCCGATGAGAATGAA
GAAGAGGGAGAGGAGGAAGAGCAGCTGCGGCACCAGAGCTCGGCGGGAGT
ACCGGTTATCGTGCAGACCATATTTACCCCTGTGCCTCGCAGTGCTGCCC
CTGCCCTCAACGACGAGCTTAGGCGATGGAAGGCCTTACCCGCCAATCCA
CACCTGCTGACGCTGCGGGGTGTGGTCTGCCGAGGAGATAAACGAAGGCT
GTCTATTGTGTGGGATGCCTGGCCCAAGGGAAGGACGACATTGCGTGCAT
GGTTGTTCTCTCCCCCTTCTTCCACCAGAGGTGGGAGGGACGTGCCGGAT
CGACTGAGTAGGCGCTCGGCCGACACATGCAACAACATTACCAGCAATCA
GAGTGGCACGAAGCCACAACAGCAGTCACTGGAAGCGCGAGCTGCATTGC
TGGGTCTAGTGGGGCGACAGCTCATCGATGCCTTGGTGTGCTTGCATGCG
CAGGGGCTTGGGCACGGAAATTTGCGGCTCGGCAACGTGTGGATGGACGC
AAAGACACTTACGCTGAAACTTGGTCCTCCATCTTTTGTGAGACTGACGG
AGAGGAATGCGCTGGCTGTCACGTGGGATGACGATGACGATGCAGGCAGG
TGCCTGGATGAGGAAGAAAAGGAGATCGAGGGCTACCGTCCTCCAGAACA
ACAAGCCGACCAGGCGCCTACAGCGGCCGGGGACATATACGCCCTGGCCG
TTTTGTTGTGGACCGTGTGGACAAAAGACAGTTTGGTTCGCCCCGAGTTA
CGCAGTGCTGCCGTGCCTTTGCCAAGGGCCTTCGAAGAGCTGCTCACAGA
GATGTGGGCAGCGGCGCCTGAGGCTCGACCGACGATTGCGGTTGTGCAAC
ACAAATTGACGGCGCTTCAACGCGCCATGTAG
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protein sequence of NO03G05400.1

>NO03G05400.1-protein ID=NO03G05400.1-protein|Name=NO03G05400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=800bp
MKTVSAPPRARARNRRRGQRRLCVPYLLPLPLLMFLFLALAPVSAYQSLP
RREQQGVAMGAWFCQFPRSSRANDAYTQQNCRLACDGSGVNKYPRCCVEA
VVGNVCNDEEFKAAQQEGVQCEPETMTDCTTSAPATEPTKSEPPSSVTEV
SASTTASPTTLFSPHPSRAPTRGPTFTPHVVPAQDKDEEKEEVSADIDKS
SKKTHIVVVVGVGGLLLALSCFFICCLSIRRSSRRQQQVRGGGGGGGGGI
NNLQAPPLAVAALYYDEDDNNAAGGSLGVHSPVTYDSNGALIGQPLESHT
SPLPSPSAPPSAPPPVTTFPAVSPLPITVSPPTSPAFDPFGVAAIDYMGV
SGGWPPTPTALSKVRAAAAAAAAETTSSSNLPPPAPVFTQTRRNGARVTA
AGSRLSFTTDGYADLMRLLVSSSSPSSSSSSSSSSSNTLLLHAIDFRLNP
LPYRLQAHEALFRGRFGCSLPPPLPVVAVASSIAQTGSNRIIVVPATGNH
SADENEEEGEEEEQLRHQSSAGVPVIVQTIFTPVPRSAAPALNDELRRWK
ALPANPHLLTLRGVVCRGDKRRLSIVWDAWPKGRTTLRAWLFSPPSSTRG
GRDVPDRLSRRSADTCNNITSNQSGTKPQQQSLEARAALLGLVGRQLIDA
LVCLHAQGLGHGNLRLGNVWMDAKTLTLKLGPPSFVRLTERNALAVTWDD
DDDAGRCLDEEEKEIEGYRPPEQQADQAPTAAGDIYALAVLLWTVWTKDS
LVRPELRSAAVPLPRAFEELLTEMWAAAPEARPTIAVVQHKLTALQRAM*
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Synonyms
Publications