NO03G04850, NO03G04850 (gene) Nannochloropsis oceanica

Overview
NameNO03G04850
Unique NameNO03G04850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2164
Alignment locationchr3:1382078..1384241 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin-conjugating enzyme/RWD-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1382078..1384241 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0015031protein transport
GO:0015031protein transport
GO:0006810transport
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR037202ESCRT_assembly_dom
IPR016135UBQ-conjugating_enzyme/RWD
IPR008883UEV_N
IPR017916SB_dom
Homology
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: EWM29890.1 (hypothetical protein Naga_100035g6 [Nannochloropsis gaditana])

HSP 1 Score: 276.9 bits (707), Expect = 1.000e-70
Identity = 126/149 (84.56%), Postives = 140/149 (93.96%), Query Frame = 0 
Query:    2 ISGRVDLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKK 151
            ++GRVDLD ++RQV CY NVARVRADVIACIAQVRTLIPK E+ IHNNG ESELLVL GTVAINYQ RQYNIPVEVY+SEPYPEAPPRCYVRPTK+MDIKVGHRHVDR+GL+YLPYLHEW ARSHN+TELCAAMSSVFG+DPPVYA+++
Sbjct:   30 MNGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRR 178
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: OQR91519.1 (dual specificity protein phosphatase, partial [Thraustotheca clavata])

HSP 1 Score: 195.3 bits (495), Expect = 3.800e-46
Identity = 124/374 (33.16%), Postives = 182/374 (48.66%), Query Frame = 0 
Query:    8 LDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKKPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQAA 382
            L+ I+  +  Y +  RVR DV   + Q+ +L P+     HNNG  S +L L GT+ I Y G QYNIPVE+++ E YP A P CYVRPT DM IK GH HVD+ GL+ LPY   W +  H+L EL     SVFG  PPVY  K+P                                                                      K EA +    K Q  L+  Y ++  E+  + E +  +    + +Q    ++     ++E+ +  + + D ++ KW++EQ ++  + VD+++   D  S+Q LE  A+  AIEDALY +D+ALA   ++L VFLK+VR++AR+Q MCVA + KIY  Q A+
Sbjct:   10 LERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLTGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIKSGHPHVDQNGLIMLPYSTHWDS-DHSLAELIGYQCSVFGTQPPVY--KRPAHQPATQTYTPQYNAHPYENRMQQSTTQYPYRQSQTSQYSSSSASYNQTYSAYTPPNVDPTIKL------KAEATE----KIQHELQKLYKRIREEIDAQFETQRDIAHGHETLQHGQQSLTQLKGDLEQTLLNIQDTDSQVTKWLSEQENQQEMDVDEVLVPTDTLSQQQLEAYADQQAIEDALYFMDRALANGEIELAVFLKEVRKMARKQFMCVALMQKIYDTQHAS 370
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: XP_008614979.1 (hypothetical protein SDRG_10750 [Saprolegnia diclina VS20] >EQC31580.1 hypothetical protein SDRG_10750 [Saprolegnia diclina VS20])

HSP 1 Score: 190.7 bits (483), Expect = 9.400e-45
Identity = 167/381 (43.83%), Postives = 229/381 (60.10%), Query Frame = 0 
Query:    6 VDLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKKPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQAALVAAR 387
            V L+ I+  +  Y +  RVR DV   + Q+ +L P+     HNNG  S +L L GT+ I Y G QYNIPVE+++ E YP A P CYVRPT DM I+ GH HVD+ GL+ LPY   W +  H+L EL     SVFG  PPVY  K+P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    X              EA +         K Q  ++  Y ++  E+  + E +  +   +  +     ++     E+++ +  + + D ++ KW++EQ ++  + VD+++  AD  S+Q L+  A+  AIEDALY +D+ALA   ++L VFLK+VR++AR+Q MCVA + K++  Q A     R
Sbjct:    9 VALERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLSGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY--KRPANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAAYXSPMPAPDPSIKLKAEATE---------KLQHEMQKLYKRIREEIDTQFETQRDVAHGQDVLVQGEQSLQQLKHELDQTLVHIQDTDVQVTKWLSEQENQQEMDVDEVLVPADALSQQQLDAYADQQAIEDALYFMDRALANGEIELSVFLKEVRKMARKQFMCVALMQKVHDTQHAIAAGRR 377
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: XP_008867302.1 (hypothetical protein H310_04642 [Aphanomyces invadans] >ETW04346.1 hypothetical protein H310_04642 [Aphanomyces invadans])

HSP 1 Score: 184.5 bits (467), Expect = 6.800e-43
Identity = 161/371 (43.40%), Postives = 225/371 (60.65%), Query Frame = 0 
Query:    8 LDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKKPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQ 379
            LD I+  +  Y + +RVR DV   + Q+ ++ P+     HNNG  S ++ L GT+ I Y G QYNIPVE+++ E YP A P C+VRPT DM I+ GH HVD+ GL+ +PY   W    H+L EL     S+FG  PPV+  ++P            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           A K +A  +   K Q  L+  Y ++  E+  E + +  +   ++ +     ++      +   + +V  MD ++ +W+A   ++  + VD+++ AADP S+Q L+  AE  AIEDALY +D+ALA   ++LQVFLK+VR+LAR+Q M VA + K++  Q
Sbjct:    9 LDRIMGSLRSYTDPSRVRYDVETLLRQIPSISPQHGVYTHNNGSTSTMMSLTGTIPIYYGGNQYNIPVEIWIPEAYPFAAPTCFVRPTTDMMIRPGHPHVDQNGLIVVPYSTNWDC-DHSLVELVGYHCSIFGAQPPVF--RRPANQQLAPAPTYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSAYQPPAIDPAVKLKA--EATEKIQHELQKMYRRIRDEIDGEFDTQREISHGQQRLVQGKQSLEQLKANLTNAVAQVEAMDRQVTEWIAANENQDEVNVDEVLVAADPLSQQQLDAYAERNAIEDALYFMDRALANGEIELQVFLKEVRKLARKQFMSVALMQKVHDVQ 374
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: OQR99144.1 (hypothetical protein ACHHYP_07257 [Achlya hypogyna])

HSP 1 Score: 183.7 bits (465), Expect = 1.200e-42
Identity = 163/384 (42.45%), Postives = 217/384 (56.51%), Query Frame = 0 
Query:    3 SGRVDLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKKPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQAALVAAR 387
            S  V L+ I+  +  Y +  RVR DV   + Q+ +L P+     HNNG  S +L L GT+ I Y G QYNIPVE+++ E YP A P CYVRPT DM I+ GH HVD+ GL+ LPY   W +  H+L EL     SVFG  PPVY  K+P   XXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXXXXXXXX           K +A +    K Q  ++  Y ++  E+  + E +  +   R E        XXXX      +  + + D ++ KW+AEQ ++  + VDD++  AD  S+Q L+  A+  AIEDALY LD+ALA   ++L VFLK+VR++AR+Q M VA + K++  Q    +  R
Sbjct:    4 SNVVTLERIMGSLRSYTDATRVRQDVETLLRQIPSLSPQSGVYTHNNGTTSTMLSLSGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY--KRPAHQXXXXXXXXXXXXXXSHMQPSTSAAQYGYQQPPQSXXXXXXXXXXXXXXXXXXXXXXSIKL-------KADATE----KLQHEMQKLYKRIREEIDAQFETQREVSQGRDEXXXXXXXXXXXXXXXXXTLVHIQDTDVQVTKWLAEQENQQEMDVDDILVPADALSQQQLDAFADQQAIEDALYFLDRALANGEIELPVFLKEVRKMARKQFMGVALMQKVHDTQHTIAMGRR 373
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: ETI31245.1 (hypothetical protein F443_21733 [Phytophthora parasitica P1569] >ETI31246.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK71659.1 hypothetical protein L915_21133 [Phytophthora parasitica] >ETK71660.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL25081.1 hypothetical protein L916_21009 [Phytophthora parasitica] >ETL25082.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL78311.1 hypothetical protein L917_20866 [Phytophthora parasitica] >ETL78312.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM31572.1 hypothetical protein L914_20879 [Phytophthora parasitica] >ETM31573.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO59977.1 hypothetical protein F444_21762 [Phytophthora parasitica P1976] >ETO59978.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP01076.1 hypothetical protein F441_21620 [Phytophthora parasitica CJ01A1] >ETP01077.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP29221.1 hypothetical protein F442_21594 [Phytophthora parasitica P10297] >ETP29222.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297] >KUF75667.1 uncharacterized protein AM587_10016238 [Phytophthora nicotianae])

HSP 1 Score: 182.6 bits (462), Expect = 2.600e-42
Identity = 120/386 (31.09%), Postives = 179/386 (46.37%), Query Frame = 0 
Query:    7 DLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVY---AIKKP----------GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQ 380
            +LD IL  + CY   +RVR DV   + Q+ +L P      HN+G  S LL L GT+ I Y+G QYNIPVE +V E YP +PP C+VRPT DM +K GH HV  +G V +PY  +W      + EL A M S+FG  PPV+   A  +P           T                                                                 E +      +V  K Q  L+  + +V  ++  + E E  L   R+ V+  L ++    +++      V   D  +  W+ E   +  +  D ++   D  S+QM++ +AE+ AIEDALY++D+AL+ + ++L VFLK+VR+L+R+Q MC+A V KI+  QQ
Sbjct:    8 NLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWVVEAYPMSPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTMLELVAHMCSIFGNMPPVFRRPASSRPQNRANGSASAATSGTGGYFQQGSYAQSHPPQPSPYYSSQFQSHSRQESEEISLFGSSQQSLGASSLSNSGVYTEVRPEERAAALKVEVTGKIQMQLEKIFKRVRDDIDLQFEHEVQLTQSRENVERGLQSLRFLRDDITRAKSVVETQDQEVTAWLEENEGKDTVDPDTILVEGDALSKQMIKTLAEHYAIEDALYYMDRALSNDEMELSVFLKEVRKLSRKQFMCLALVQKIHAKQQ 392
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: XP_008898619.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >XP_008898620.1 hypothetical protein PPTG_06448 [Phytophthora parasitica INRA-310] >ETN16270.1 hypothetical protein PPTG_06448 [Phytophthora parasitica INRA-310] >ETN16271.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 182.2 bits (461), Expect = 3.400e-42
Identity = 120/386 (31.09%), Postives = 179/386 (46.37%), Query Frame = 0 
Query:    7 DLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVY---AIKKP----------GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQ 380
            +LD IL  + CY   +RVR DV   + Q+ +L P      HN+G  S LL L GT+ I Y+G QYNIPVE +V E YP +PP C+VRPT DM +K GH HV  +G V +PY  +W      + EL A M S+FG  PPV+   A  +P           T                                                                 E +      +V  K Q  L+  + +V  ++  + E E  L   R+ V+  L ++    +++      V   D  +  W+ E   +  +  D ++   D  S+QM++ +AE+ AIEDALY++D+AL+ + ++L VFLK+VR+L+R+Q MC+A V KI+  QQ
Sbjct:    8 NLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWVVEAYPMSPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTMLELVAHMCSIFGNMPPVFRRPASSRPQNRANGSASAATSGTGGYFQQGSYAQSHPPQPSPYYSSQFQSHSRQESEEISLFGSSQQSLGASSLSNSGVYTEVRPEERAAALKVEVTGKIQMQLEKIFKRVRDDIDLQFEHEVQLTQSRENVERGLQSLRFLRDDITRAKSVVETQDQEVTAWLEEYEGKDTVDPDTILVEGDALSKQMIKTLAEHYAIEDALYYMDRALSNDEMELSVFLKEVRKLSRKQFMCLALVQKIHAKQQ 392
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: XP_012205456.1 (hypothetical protein SPRG_11255 [Saprolegnia parasitica CBS 223.65] >KDO23823.1 hypothetical protein SPRG_11255 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 179.5 bits (454), Expect = 2.200e-41
Identity = 181/385 (47.01%), Postives = 234/385 (60.78%), Query Frame = 0 
Query:    3 SGRVDLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKKPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQA-SLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQAALVAAR 387
            S  V L+ I+  +  Y +  RVR DV   + Q+ +L P+     HNNG  S +L L GT+ I Y G QYNIPVE+++ E YP A P CYVRPT DM I+ GH HVD+ GL+ LPY   W +  H+L EL     SVFG  PPVY  K+P       XXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXX        A K +A  +V  K Q  ++  Y ++  E+  + E +  + AH ++V A      XXXX                + KW++EQ ++  + VD+++  AD  S+Q L+  A+  AIEDALY +D+ALA   ++L VFLK+VR+LAR+Q MCVA + K++  Q A     R
Sbjct:    4 SNVVALERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLSGTIPIYYNGSQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY--KRPA------XXXXXXXXXXXXXXXXXXXXXXXXXXXQYXXXXXXXXXXXXXXXXXXXXXXXXSPMPAPDPAIKLKA--EVTEKLQHEMQKLYKRIREEIDTQFETQRDV-AHGQDVLAXXXXXXXXXXXXXXXXXXXXXXXXXXVTKWLSEQENQQEMDVDEVLVPADALSQQQLDAFADQQAIEDALYFMDRALANGEIELSVFLKEVRKLARKQFMCVALMQKVHDTQHAIATGRR 376
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: XP_002902818.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55988.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 176.8 bits (447), Expect = 1.400e-40
Identity = 121/388 (31.19%), Postives = 178/388 (45.88%), Query Frame = 0 
Query:    7 DLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVY---AIKKP--------GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQ----QVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQ 380
            +LD IL  + CY   +RVR DV   + Q+ +L P      HN+G  S LL L GT+ I Y+G QYNIPVE +V E YP APP C+VRPT DM +K GH HV  +G V +PY  +W      + EL A M S+FG  PPV+   A  +P                                                                           EA+  E       +V  K Q  L+    +V  ++  + E E  L   R+ V+  L ++    +++      V   D  +  W+ E   +  +  D ++   +  S+QM++ +AE+ A+EDALY++D+AL+ + ++L VFLK+VR LAR+Q MC+A V KI+  QQ
Sbjct:  313 NLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWVVETYPMAPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTMLELVAHMCSIFGNMPPVFRRPAASRPQSRVNGGASAASSGTGGYFQQGSYAQSHPPQPSPYYSSQFQSHSRQESEENSLFGASQQSLGASSSSNSGVYASNEARPEERAAALKVEVTGKIQMQLEKTLKRVRDDIDLQFEHEVQLTQSRENVERGLQSLRFLRDDIARAKSVVETQDTEVTAWLEENEGKDTVDPDTILVEGEALSKQMIKTLAEHYAMEDALYYMDRALSNDEMELAVFLKEVRRLARKQFMCLALVQKIHVQQQ 699
[Close]
BLAST of NO03G04850 vs. NCBI_GenBank
Match: GAY01554.1 (Hypothetical protein PINS_009395 [Pythium insidiosum])

HSP 1 Score: 165.6 bits (418), Expect = 3.200e-37
Identity = 114/378 (30.16%), Postives = 180/378 (47.62%), Query Frame = 0 
Query:    7 DLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNGMESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKKPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKKREAMQQVLSKTQRALKAFYGKVTTELGEEQEKEAALQAHRKEVQASLGAMXXXXEEVEERIRRVMEMDGRLEKWMAEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDLQVFLKKVRELAREQLMCVAHVNKIYRAQQAALVA 385
            +LD IL  +  Y   +RVR DV     Q+ +L P      HN+G  S LL L GT+ I Y+G QYNIPVE ++ E YP APP C+VRPT DM +K GH HV  +G V +PY+ +W  +   L EL A M S+FG  PPV+  ++P                                                                   E +       V  K Q+ ++  +     ++  + E + AL   ++ V+  + ++    +++      ++  D  +++W+ E  S+  +  D ++  AD  S+Q+++ ++E+ AIEDALY +D+AL+   ++L  FLK+VR+LAR+Q MC A + KI  A+Q  L A
Sbjct: 1821 NLDQILSSLQIYLQCSRVRQDVYNLXRQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWMVETYPLAPPVCFVRPTADMMVKPGHPHVTSDGFVKIPYIADW-RQDFTLVELVAHMCSIFGNIPPVF--RRPA----------------------------QAVPQYSSSPYNPSPVSTSMNGYYQQSGAASPSPVVRYEDRVAAVKLDVTGKIQQEMERVF---KHDIDVQFEHQLALTQSKETVERGVQSLEFLRDDLARANIVIVSQDQEVQQWLDENESKETVDPDSILIEADGLSKQLIKTMSEHQAIEDALYFMDRALSNGEIELASFLKEVRKLARQQFMCQALIQKI-TARQLQLTA 2163
The following BLAST results are available for this feature:
BLAST of NO03G04850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29890.11.000e-7084.56hypothetical protein Naga_100035g6 [Nannochloropsi... [more]
OQR91519.13.800e-4633.16dual specificity protein phosphatase, partial [Thr... [more]
XP_008614979.19.400e-4543.83hypothetical protein SDRG_10750 [Saprolegnia dicli... [more]
XP_008867302.16.800e-4343.40hypothetical protein H310_04642 [Aphanomyces invad... [more]
OQR99144.11.200e-4242.45hypothetical protein ACHHYP_07257 [Achlya hypogyna... [more]
ETI31245.12.600e-4231.09hypothetical protein F443_21733 [Phytophthora para... [more]
XP_008898619.13.400e-4231.09hypothetical protein, variant 1 [Phytophthora para... [more]
XP_012205456.12.200e-4147.01hypothetical protein SPRG_11255 [Saprolegnia paras... [more]
XP_002902818.11.400e-4031.19conserved hypothetical protein [Phytophthora infes... [more]
GAY01554.13.200e-3730.16Hypothetical protein PINS_009395 [Pythium insidios... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005398NSK005398Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04850.2NO03G04850.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04850.1NO03G04850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573112gene_1694Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100035g6gene719Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04850.2NO03G04850.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04850.1NO03G04850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04850 ID=NO03G04850|Name=NO03G04850|organism=Nannochloropsis oceanica|type=gene|length=2164bp
TATTTTGAAAAGCATGTGTTGTGGGGTAGGAGAAAAAGACAGGAGGTTAA
CGGACCCGGAAGACCAAACTTTTGGGCAGGCCAAATGCTAGTTAGTAAGT
ATAACTCAAAATGATGCCCACACGTCCAGATCACGCTTCACGTGGATGAC
ACACGTAATGCTTTGCATGCTGGTAGGAGAATGGATGGCCTGAGCCCTGG
CTGAGCCACACCCAACCCTCGAAAAAGCTTCTCATTTGGGCGGGGGCATC
ATCTTACACCTCCCTATCCCACAAACCCAAAAAAATACAGCGCCCAGCTC
GGAGGGATGATCAGCGGGCGCGTGGACCTAGACGGAATCCTACGGCAGGT
GAACTGCTACCACAATGTGGCTCGTGTCCGTGCAGACGTGATTGCCTGCA
TTGCTCAGgtatgacactccctttttcccttctcccttccaccctccctt
tactagcatgctatgaccgttcgacaactcaatgcggcctttgagcgata
ctgtgagcgtctccgatgtattgtgcgtaattgctaatctcgggtcgaaa
ttattcgaagaaatctaccagactgccgagtccgctcagcttatgcgcct
ctccctcactcacccacccaccgcttactcctttgtcctccagGTCCGCA
CGCTCATTCCCAAAAAGGAGCGACTCATACACAACAATGGCATGGAAAGC
GAGCTGTTGGTGCTGCATGGCACGGTAGCCATCAACTACCAAGGCAGGCA
GTACAACATTCCTGTCGAGGTGTATGTAAGTGAGCCTTACCCCGAGgtaa
gaaccaagaccgatcagggaggaggagatgtgtttggaaggaagtaagaa
agagtggagaggaatcagaggggaaatgttattcctgtcaagcccttaac
atttgattaatgatcattgtttctcatttcctccctcctccctcacgcct
agGCACCTCCCCGCTGCTACGTCCGTCCAACCAAGGACATGGATATAAAA
GTGGGCCATCGCCATGTAGACCGTGAAGGATTGGTCTACCTCCCATACCT
GCACGAATGGACTGCACGCTCACATAATTTGACGGAGCTGTGCGCGGCTA
TGAGTAGTGTGTTCGGCATGGACCCCCCTGTCTATGCGATCAAAAAGCCT
GGTACTGGGTCGGCTTCTCCGACTCCTGTCGCTGTTGCGACTGCTGCCTC
ATTTTCGACGAGTCTTTACCCAGGTCAAGTAGGAGGCGGAGGAGGAGGGA
GTGGGCGATATACGCCGGTGGGGCAGCAGGTGCAGCAACCGTCGCCGCCG
CCATCATACAGCAGCGTAACGACCCCTGTGCAGGAGGAGCAGTATCAGGC
CGAAGCCAAGAAAAGGGAGGCAATGCAGCAGGTGCTTAGTAAGACACAAC
GAGCATTGAAAGCATTTTATGGAAAGGTGACGACGGAATTGGGGGAGGAG
CAGGAGAAGGAGGCGGCACTTCAGGCGCACCGGAAGGAAGTACAGGCGAG
CTTGGGGGCGATGAAGAAGAAGAAGGAGGAGGTGGAGGAGAGGATCAGGA
GGGTGATGGAAATGGATGGGCGGTTGGAGAAATGGATGGCAGAGCAGGCG
TCAAGGCCAGTGATTCCCGTGGATGACCTGGTGGAGGCGGCCGATCCTCC
CTCGAGACAGATGTTGGAATTAGTGGCTGAAAACGCGGCGATTGAGGATG
CACTGTACCACCTGGACAAGGCCTTAGCTAAGAACAGTGTGGACCTACAA
GTCTTCTTGAAGAAGGTCAGAGAGCTGGCGCGGGAGCAGTTGATGTGTGT
GGCGCACGTGAACAAAATTTACAGAGCACAGCAGGCCGCATTGGTGGCGG
CAAGGGCAGCACCGCTGCAGAATCGAGCGGTAGGGTCGGGAAGAGGAGGA
GGGGGAGGGAGCATTGCATACCCCTCCATCCCACCGGCGATGTCCCGGTG
AGTGAGATAGGGGGGGGGGGGGCAGTGTATGTGAATGTATATGGGTTTTG
AGGGAAGGGGAGATGGAGGACGGCAGGGAGGAAGAGGGAAGGGTGGTGTA
CCTCCAATTAAACAGTACAGTGCGAATAGTGCGCGGTATATCGGCGGATG
CAACAAAGAAAGCAATGGTAGCAGCCATAGGGAAAAGAAATGGAATAAAT
GATTTGATGCTTTA
back to top

protein sequence of NO03G04850.2

>NO03G04850.2-protein ID=NO03G04850.2-protein|Name=NO03G04850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=321bp
MDIKVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYA
IKKPGTGSASPTPVAVATAASFSTSLYPGQVGGGGGGSGRYTPVGQQVQQ
PSPPPSYSSVTTPVQEEQYQAEAKKREAMQQVLSKTQRALKAFYGKVTTE
LGEEQEKEAALQAHRKEVQASLGAMKKKKEEVEERIRRVMEMDGRLEKWM
AEQASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNS
VDLQVFLKKVRELAREQLMCVAHVNKIYRAQQAALVAARAAPLQNRAVGS
GRGGGGGSIAYPSIPPAMSR*
back to top

protein sequence of NO03G04850.1

>NO03G04850.1-protein ID=NO03G04850.1-protein|Name=NO03G04850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=418bp
MISGRVDLDGILRQVNCYHNVARVRADVIACIAQVRTLIPKKERLIHNNG
MESELLVLHGTVAINYQGRQYNIPVEVYVSEPYPEAPPRCYVRPTKDMDI
KVGHRHVDREGLVYLPYLHEWTARSHNLTELCAAMSSVFGMDPPVYAIKK
PGTGSASPTPVAVATAASFSTSLYPGQVGGGGGGSGRYTPVGQQVQQPSP
PPSYSSVTTPVQEEQYQAEAKKREAMQQVLSKTQRALKAFYGKVTTELGE
EQEKEAALQAHRKEVQASLGAMKKKKEEVEERIRRVMEMDGRLEKWMAEQ
ASRPVIPVDDLVEAADPPSRQMLELVAENAAIEDALYHLDKALAKNSVDL
QVFLKKVRELAREQLMCVAHVNKIYRAQQAALVAARAAPLQNRAVGSGRG
GGGGSIAYPSIPPAMSR*
back to top
Synonyms
Publications