NO03G04810, NO03G04810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04810 vs. NCBI_GenBank
Match: EWM29919.1 (polyadenylate-binding cytoplasmic and nuclear-like protein [Nannochloropsis gaditana]) HSP 1 Score: 320.5 bits (820), Expect = 1.500e-83 Identity = 269/581 (46.30%), Postives = 317/581 (54.56%), Query Frame = 0 Query: 152 LSLASQHPHSMLLSSPAGHHHPGNMHTHGQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAPPPLVTPKQRQHYLKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLASQRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSHPQ--IAHSPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSTLPGG-HTGGRALPP--------RAPLASTATGE---GKGNEGVGDSTESSVA---TAVVAPSESRRKSFPGPDLTQLRGGRHGVIGVPP---SLPRGGGEGGNLTNISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHLRQVLVRGMALDASHDVLRGLFHGEGEVEDAFFLSDPSTRAPIGAALVTFREPRVASLVLRTPYRDLPEGRVCEILAVP 713 L AS H + L S AG H G MH+ S + PP VTPKQRQ+YLKRALE+FTKEHL LLCDIANN+GG +F+EAY+R+C+DL+NRKVFVRGIAWGTT+DSLGEALSVFG IQEAAVICDR TGKSKGYAFVTFDHGESAFRLL+LP+I+IDGRNVQCFLASQRG+ Y +PQ ++P XXXXXXXXXXXXXXXXXXXXXXXXXXX S PG H G A P +A + E G ++ VG V + P+ESRR+SFPGP+LTQ++GGRHGVIG+PP L G GN XXXXXXXXXXXXXXXXXXXXXXXX H RQV+VRG+ +D++ ++L LF GEGE+ED FL +P+T AP+GAAL+TF E R A+L L TP+R LP GRVCE+++VP Sbjct: 123 LMTASPHHLPLHLPSSAGQQHSGAMHSQEYSS---LSSGPPPFPPFHPLSTSSDGYQHNQAGASANALPVPPSVTPKQRQYYLKRALESFTKEHLTTLLCDIANNMGGSVFEEAYERACLDLANRKVFVRGIAWGTTSDSLGEALSVFGTIQEAAVICDRVTGKSKGYAFVTFDHGESAFRLLELPYISIDGRNVQCFLASQRGS---------------------------------------------GSGASGDTHGPQTSHGHPTPFGGKDAGPHHNYHNPQPPSRYTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHVNMHHSAGPPTSVPSFAPGAMHVGVGAGGPDMARPHFHKADSVESLKDEKIVGGSSDNVGQGEAKPVGVRENPAITPTESRRRSFPGPELTQIQGGRHGVIGIPPGREGLAEVGDARGN---------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXHARQVVVRGLGMDSNQELLARLFLGEGELEDVLFLGNPTTHAPMGAALITFWEARSAALALLTPFRSLPCGRVCEVMSVP 622
BLAST of NO03G04810 vs. NCBI_GenBank
Match: XP_002968180.2 (UBP1-associated protein 2C [Selaginella moellendorffii]) HSP 1 Score: 115.2 bits (287), Expect = 9.400e-22 Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 0 Query: 220 APPPLVTPKQRQHYLKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLAS 353 AP PL + + LKR LE +KE LVALL D A + + D+ + + D ++RK+FVRG+AW TT+ L EA FG I+E AVI D+ATGKS+G+ F+TF H +SA R L P TIDGR C LAS Sbjct: 28 APVPL---RLSRDDLKRLLEPLSKEQLVALLTD-AGSQYSAVADDIREVASKDPAHRKLFVRGLAWETTSQDLREAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALKEPSKTIDGRITVCNLAS 156
BLAST of NO03G04810 vs. NCBI_GenBank
Match: XP_002976199.1 (UBP1-associated protein 2C [Selaginella moellendorffii] >EFJ23104.1 hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]) HSP 1 Score: 114.0 bits (284), Expect = 2.100e-21 Identity = 64/133 (48.12%), Postives = 84/133 (63.16%), Query Frame = 0 Query: 220 APPPLVTPKQRQHYLKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLAS 353 AP PL + + LKR LE +KE LVALL D A + + D+ + + D ++RK+FVRG+AW TT+ L +A FG I+E AVI D+ATGKS+G+ F+TF H +SA R L P TIDGR C LAS Sbjct: 28 APVPL---RLSRDDLKRLLEPLSKEQLVALLTD-AGSQYSAVADDIREVASKDPAHRKLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALKEPSKTIDGRITVCNLAS 156
BLAST of NO03G04810 vs. NCBI_GenBank
Match: XP_002960787.1 (UBP1-associated protein 2C [Selaginella moellendorffii] >XP_024544838.1 UBP1-associated protein 2C [Selaginella moellendorffii] >EFJ38326.1 hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]) HSP 1 Score: 113.6 bits (283), Expect = 2.700e-21 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 0 Query: 234 LKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLAS 353 LKR LE +KE LVALL D A + + D+ D + D ++RK+FVRG+AW TT+ +L +A +G I+E AVI D+ATGKS+G+ F+TF H +SA R L P TIDGR C LAS Sbjct: 30 LKRLLEPLSKEQLVALLID-AGSQYPAVADDIRDVASKDPAHRKLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALKEPSKTIDGRITVCNLAS 147
BLAST of NO03G04810 vs. NCBI_GenBank
Match: XP_024394460.1 (UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394461.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394462.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394463.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394464.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394466.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394467.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394468.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394469.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024394470.1 UBP1-associated protein 2C-like [Physcomitrella patens] >PNR40511.1 hypothetical protein PHYPA_017913 [Physcomitrella patens]) HSP 1 Score: 111.3 bits (277), Expect = 1.400e-20 Identity = 60/130 (46.15%), Postives = 81/130 (62.31%), Query Frame = 0 Query: 226 TPKQRQHYLKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLASQRG 356 T K + LK+ LE +K+ LVALL D A +L + D+ D + D +RK+FVRG+AW T++ +L EA +G ++EA VI D+ TGKS+G+ FVTF H +SA R L P IDGR C LAS G Sbjct: 45 TVKLSREELKKLLEPLSKDQLVALLID-AGSLFPAVADDIRDSASKDPVHRKLFVRGLAWETSSVALREAFEQYGEVEEACVITDKGTGKSRGFGFVTFKHMDSAQRALKEPSKNIDGRITVCNLASAGG 173
BLAST of NO03G04810 vs. NCBI_GenBank
Match: PTQ40317.1 (hypothetical protein MARPO_0040s0006 [Marchantia polymorpha]) HSP 1 Score: 106.3 bits (264), Expect = 4.300e-19 Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 238 LETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLAS 353 LE +KE L+ LL D + + D+ D + D ++RK+FVRG+AW TT+ +L +A +G I+E AVI D+ATGKS+G+ F+TF H +SA R L P IDGR C LAS Sbjct: 44 LEPLSKEQLITLLADAGSQFSA-VADDIRDVASKDPAHRKLFVRGLAWETTSQALRDAFEQYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALKEPSKNIDGRITVCNLAS 157
BLAST of NO03G04810 vs. NCBI_GenBank
Match: XP_024388054.1 (UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024388064.1 UBP1-associated protein 2C-like [Physcomitrella patens] >XP_024388073.1 UBP1-associated protein 2C-like [Physcomitrella patens] >PNR62730.1 hypothetical protein PHYPA_001154 [Physcomitrella patens]) HSP 1 Score: 104.8 bits (260), Expect = 1.300e-18 Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = 0 Query: 234 LKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLAS 353 LK LE K+ L+ALL + A +L + D+ D + D +RK+FVRG+AW T++ +L EA +G ++EA VI D+ TGKS+G+ F+TF H +SA R L P IDGR C LAS Sbjct: 53 LKSLLEPLNKDQLIALLIE-AGSLFPAVADDIRDIASKDPVHRKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKGTGKSRGFGFITFKHMDSAHRALKEPSKNIDGRITVCNLAS 170
BLAST of NO03G04810 vs. NCBI_GenBank
Match: XP_008777247.1 (PREDICTED: UBP1-associated protein 2C-like [Phoenix dactylifera]) HSP 1 Score: 102.8 bits (255), Expect = 4.800e-18 Identity = 54/125 (43.20%), Postives = 75/125 (60.00%), Query Frame = 0 Query: 229 QRQHYLKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLASQ 354 Q + L+ L+ K+ LV LL + + +E +C D +RK+FVRG+AW TT+++L A S+ G I+E AVI D+ATGKS+GY F+TF H ESA + L P IDGR C LA + Sbjct: 21 QSEGQLRNLLDPLRKDQLVDLLVKLGTQY-STVAEEIKGVACSDPVHRKLFVRGLAWETTSETLCAAFSMHGEIEEGAVIFDKATGKSRGYGFITFRHMESAQKALQEPSKMIDGRLAVCNLACE 144
BLAST of NO03G04810 vs. NCBI_GenBank
Match: OQR85791.1 (hypothetical protein ACHHYP_11364 [Achlya hypogyna]) HSP 1 Score: 102.1 bits (253), Expect = 8.200e-18 Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 0 Query: 234 LKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLAS 353 L R LE F+++ +V +L A IF+E + D+++RK+FVRG+AW T+D L + FGP+Q A VI D+ TGKSKG+ FVTFD ESA L IDGR C LA+ Sbjct: 26 LTRLLEPFSRDQIVTILVSAAMQ-HDSIFNEIKTMASADIAHRKIFVRGLAWEATSDKLRQHFVRFGPVQNATVIMDKVTGKSKGFGFVTFDDMESANAALKAQPHDIDGRKCPCNLAA 143
BLAST of NO03G04810 vs. NCBI_GenBank
Match: XP_024391093.1 (UBP1-associated protein 2C-like isoform X1 [Physcomitrella patens] >XP_024391094.1 UBP1-associated protein 2C-like isoform X1 [Physcomitrella patens] >XP_024391095.1 UBP1-associated protein 2C-like isoform X1 [Physcomitrella patens] >XP_024391096.1 UBP1-associated protein 2C-like isoform X1 [Physcomitrella patens] >XP_024391097.1 UBP1-associated protein 2C-like isoform X1 [Physcomitrella patens] >PNR43871.1 hypothetical protein PHYPA_016254 [Physcomitrella patens]) HSP 1 Score: 102.1 bits (253), Expect = 8.200e-18 Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 0 Query: 234 LKRALETFTKEHLVALLCDIANNLGGPIFDEAYDRSCMDLSNRKVFVRGIAWGTTNDSLGEALSVFGPIQEAAVICDRATGKSKGYAFVTFDHGESAFRLLDLPFITIDGRNVQCFLAS 353 +K+ +E FTKE L+ LL + A N + E + D +RK+FVRG+ W TT ++L S FG ++E AVI D+ATGKS+G+ FVTF H + A R L P IDGR C LAS Sbjct: 41 VKKLVEPFTKEQLMDLLENAALN-HADVLHEIRKLADKDPGHRKIFVRGLGWDTTTETLKTVFSQFGEVEEGAVIMDKATGKSRGFGFVTFKHMDGAQRSLKEPSKRIDGRMTVCQLAS 158 The following BLAST results are available for this feature:
BLAST of NO03G04810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04810 ID=NO03G04810|Name=NO03G04810|organism=Nannochloropsis oceanica|type=gene|length=4133bpback to top protein sequence of NO03G04810.1 >NO03G04810.1-protein ID=NO03G04810.1-protein|Name=NO03G04810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=778bpback to top Synonyms
Publications
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