NO03G03010, NO03G03010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO03G03010 vs. NCBI_GenBank
Match: EWM29735.1 (hypothetical protein Naga_100022g46 [Nannochloropsis gaditana]) HSP 1 Score: 184.1 bits (466), Expect = 2.900e-43 Identity = 104/137 (75.91%), Postives = 113/137 (82.48%), Query Frame = 0 Query: 1 MFAARRVFARTLALRPAMAVGTRSGVQAPTQIVRRTMAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLISKLFTGGAKAVPEAVAXXXXXXXXXXXAVSMADDKFSDYVSVPENMLKWEQSLNDPKAYE 138 MFAARR+ A + ALRPA T QAPT++VRRT+AGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYL+SKLF+GG XXXXXXXXXXX +SMADDKFS+YV ENMLKWEQSLNDPKAYE Sbjct: 1 MFAARRIVAHSSALRPAFTHAT-GRAQAPTRVVRRTLAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKXXXXXXXXXXXXXXXXXXXVISMADDKFSEYVGNSENMLKWEQSLNDPKAYE 136
BLAST of NO03G03010 vs. NCBI_GenBank
Match: XP_008862972.1 (hypothetical protein H310_01599 [Aphanomyces invadans] >ETW09167.1 hypothetical protein H310_01599 [Aphanomyces invadans]) HSP 1 Score: 63.2 bits (152), Expect = 7.500e-7 Identity = 41/121 (33.88%), Postives = 51/121 (42.15%), Query Frame = 0 Query: 11 TLALRPAMAVGTRSGVQAPTQIVRRTMAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLISKLFTGGAKAVPEAVAXXXXXXXXXXXAVSMADDKFSDYVSVPENMLKWEQSLN 132 T A++PA A G G MA HG P TG E +R L D +V +GFYT L TG V E A S+ DD F ++ VP N KWE+SL+ Sbjct: 9 TRAVKPAAAAGQTRG-----------MASHGPPPTYTGLEATIRAKLPNDHDIVLATLGFYTVLTAPLWFPTGKKAKVEEPAASPAADVNASTEIPSLFDDNFDEWSKVPGNFAKWEKSLD 118
BLAST of NO03G03010 vs. NCBI_GenBank
Match: XP_012196091.1 (hypothetical protein SPRG_02150 [Saprolegnia parasitica CBS 223.65] >KDO33343.1 hypothetical protein SPRG_02150 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 63.2 bits (152), Expect = 7.500e-7 Identity = 41/100 (41.00%), Postives = 50/100 (50.00%), Query Frame = 0 Query: 35 RTMAGHG-SAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLISKLFTGGAKAVP--EAVAXXXXXXXXXXXAVSMADDKFSDYVSVPENMLKWEQSLN 132 R MAGH S PP TG E +R L ED+Q+V +G YT L F G K P EAVA S+ DD F ++ V N+ KWE+SLN Sbjct: 18 RGMAGHAHSGPPPTGIEAVIRSKLPEDYQIVMATLGIYTVL-TAPLWFPSGKKEAPKVEAVAAPTSTTSVIP---SIIDDSFEEWAKVAGNIAKWEESLN 113
BLAST of NO03G03010 vs. NCBI_GenBank
Match: OQR91724.1 (hypothetical protein ACHHYP_04440 [Achlya hypogyna]) HSP 1 Score: 63.2 bits (152), Expect = 7.500e-7 Identity = 41/100 (41.00%), Postives = 50/100 (50.00%), Query Frame = 0 Query: 35 RTMAGHG-SAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLISKLFTGGAKAVP--EAVAXXXXXXXXXXXAVSMADDKFSDYVSVPENMLKWEQSLN 132 R MAGH S PP TG E +R L ED+Q+V +G YT L F G K P EAVA S+ DD F ++ V N+ KWE+SLN Sbjct: 32 RGMAGHAHSGPPPTGIEAVIRSKLPEDYQIVMATLGIYTVL-SAPLWFPSGKKEAPKVEAVAAPSSATSVIP---SIIDDSFEEWAKVAGNLAKWEESLN 127
BLAST of NO03G03010 vs. NCBI_GenBank
Match: OQS07748.1 (hypothetical protein THRCLA_20072 [Thraustotheca clavata]) HSP 1 Score: 62.8 bits (151), Expect = 9.800e-7 Identity = 38/98 (38.78%), Postives = 50/98 (51.02%), Query Frame = 0 Query: 35 RTMAGHG-SAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLISKLFTGGAKAVPEAVAXXXXXXXXXXXAVSMADDKFSDYVSVPENMLKWEQSLN 132 R MAGH S PP TG E +R L ED+Q+V +G YT L + L+ +K PEA S+ DD F ++ V N+ KWE+SLN Sbjct: 18 RGMAGHAHSGPPPTGIEAVIRSKLPEDYQIVMATLGIYTV--LSAPLWWPSSKK-PEAKVEAVAPSSGSSVIPSIIDDSFEEWAKVAGNLAKWEESLN 112 The following BLAST results are available for this feature:
BLAST of NO03G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5 Position : 0 Zoom : x 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03010 ID=NO03G03010|Name=NO03G03010|organism=Nannochloropsis oceanica|type=gene|length=769bpback to top protein sequence of NO03G03010.1 >NO03G03010.1-protein ID=NO03G03010.1-protein|Name=NO03G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=138bpback to top Synonyms
Publications
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