NO03G02960, NO03G02960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO03G02960 vs. NCBI_GenBank
Match: EWM29751.1 (hypothetical protein Naga_100022g51 [Nannochloropsis gaditana]) HSP 1 Score: 411.0 bits (1055), Expect = 5.400e-111 Identity = 245/430 (56.98%), Postives = 283/430 (65.81%), Query Frame = 0 Query: 12 SIHTRLTEDCFRIYHEVEDVGKTVKATKRRARWTFSFGEKGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSWFEGNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLPLKPVHLPSRRAEFDRRD---LSSSTTRPTGSLRENDSFEASDDFNPRATTSY---SNSKPRAVMKAGITTSLPFTMNAAPVVDLLGVGGEDFTGITSRXXXXXXXXXXXXXXXFDPFSGPTSGEQCADFSAGFNMAKGRANLTAHDLAKEFGSLSTASLPEASSAPAVVMPPLTYGENSLPAFHYNPGSVTNGNXXXXXXXXXSLALISLAKNDDSGEVDVDKVTASLVNLNNLLDDGTPSGTTSPTKLYSSVYADNRSLEEMKASRAARPPQVPARPIFIERTLPPRPPISPYA--------MLTSPLQQ 428 + H EDC+R+YHEVEDVGKTV+ATKRRARWTFSFGE+GQE E+VL HSVVSGKK ITY+G QIHHS+++SR+FSHSWF+G+HALRVDITD+V+VGRGR+DKMYELTLDGVPFGVLPL+PVHLP R E + + S TTR RE D + FNPR S + S+P K G++ S + P VDLLG ED G+ S DPFSGP S EQ ADF+A FN AKGR+N TAHDL KEFG S P + MPPLTYG LP F Y G N + AL+ +A DDSGEVDVDK TASLVNLNNLLDD SG+ SP+KLYSSVY DNRSLEE+KASRAAR PQ ARPIFI+RT PP SP A ML+SP+QQ Sbjct: 13 NFHPPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLP-RLMEPNAQGPTAQGSVTTRKAPGQRETD-----EAFNPRGIHSVITRAGSRP----KLGMSHSQQRPTSVTPPVDLLGGWEEDGGGLAS-----------------DPFSGPASKEQFADFTASFNEAKGRSNATAHDLVKEFGGTSEVQ----ERTPPLSMPPLTYG-RPLPTFTYVQGPGAN----LSTDKRSTTALVRVATKDDSGEVDVDKATASLVNLNNLLDDEGASGSISPSKLYSSVYVDNRSLEEIKASRAARAPQPLARPIFIDRTPPPEIMTSPGAQPFFPGRGMLSSPMQQ 406
BLAST of NO03G02960 vs. NCBI_GenBank
Match: GAX10578.1 (hypothetical protein FisN_14Lh078 [Fistulifera solaris]) HSP 1 Score: 73.2 bits (178), Expect = 2.700e-9 Identity = 63/209 (30.14%), Postives = 88/209 (42.11%), Query Frame = 0 Query: 32 GKTVKATKRRARWTFSFGEK-------------GQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSWF-EGNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLPLKPVHLPSRRAEFDRRDLSSSTTRPTGSLRENDSFEASDDFNPRATTSYSNSKPRAVMKAGITTSLPFTMN---------AAPVVDLLGV-GGEDF 217 GK V ATKRR RW F F K G+E E+V+V SV SGK+ I Y+G +IH+S + HSW +GNH ++V + + Y++ +DG F +P K L + G+ + S + P + + A ++ IT SL T AP VDLLG GG DF Sbjct: 16 GKRVAATKRRIRWRFGFPNKQALAQGLSGTDCRGEEHEIVVVWSVTSGKRQIMYDGKEIHYSATRTSVIDHSWSGKGNHVMKVVCHAAPPMSANPGFRQYDMFIDGQSFFSMP-KVYELGIK----------------GGAAATSSSVVRGNSLPPAIHAPQTPDEEEAELQRAITASLQETKQHLNRSTAPATAPEVDLLGENGGNDF 207
BLAST of NO03G02960 vs. NCBI_GenBank
Match: GAX22463.1 (hypothetical protein FisN_14Hh078 [Fistulifera solaris]) HSP 1 Score: 72.0 bits (175), Expect = 6.000e-9 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 0 Query: 32 GKTVKATKRRARWTFSFGEK-------------GQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSWF-EGNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLP 131 GK V ATKRR RW F F K G+E E+V+V SV SGK+ I Y+G +IH+S + H+W +GNH ++V + + Y++ +DG F +P Sbjct: 16 GKRVAATKRRVRWRFGFPNKQALAQGLSGTDCRGEEHEIVVVWSVTSGKRQIMYDGKEIHYSATRTSVIDHTWSGKGNHVMKVVCHAAPPMSANPGFRQYDMFIDGQSFFSMP 128
BLAST of NO03G02960 vs. NCBI_GenBank
Match: OEU18558.1 (hypothetical protein FRACYDRAFT_260446 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.6 bits (166), Expect = 6.600e-8 Identity = 45/151 (29.80%), Postives = 72/151 (47.68%), Query Frame = 0 Query: 32 GKTVKATKRRARWTFSFGE-------------KGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSW-FEGNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLPL----------KPVHLPSR-RAEFDRRDLSSSTTRPTG 158 GK V +TKR+ RW F F +G+E EV +V S+ SGK+ I+ +G ++H+S + + SW +GNH ++V + + Y+L++DG F +P P HLP+R + D++ TTR G Sbjct: 16 GKRVSSTKRKIRWRFGFANQQAIDNGRTGTDCRGEEHEVSIVWSITSGKRQISMDGKEVHYSTNRAGMLDFSWQSKGNHVIKVLCHAAAPMTPEPGFRQYDLSIDGQSFFTMPKVFQVGVKGSNAPHHLPARGQYRSDQQQPQYPTTRAVG 166
BLAST of NO03G02960 vs. NCBI_GenBank
Match: XP_008903911.1 (hypothetical protein PPTG_09872 [Phytophthora parasitica INRA-310] >ETI48692.1 hypothetical protein F443_07310 [Phytophthora parasitica P1569] >ETL95149.1 hypothetical protein L917_07010 [Phytophthora parasitica] >ETM48379.1 hypothetical protein L914_07084 [Phytophthora parasitica] >ETN10799.1 hypothetical protein PPTG_09872 [Phytophthora parasitica INRA-310] >ETP18476.1 hypothetical protein F441_07311 [Phytophthora parasitica CJ01A1] >ETP46385.1 hypothetical protein F442_07370 [Phytophthora parasitica P10297]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 0 Query: 24 IYHEVEDVGKTVKATKRRARWTFSFGEKGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSWFE--GNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLP--LKPVHLPSRRAEFDRRDLSSSTTRPTGSLRENDSFEASDDFNPRATTSYSNSK 184 +Y+EV +VGKT++++K+R W E+G+E E+ L HS+ SGKKV+ +G + S +S F G H + + I V++ + MY+L +DG+ F LP L P LP + + ++ SS TR S N SF + +++ S SNS+ Sbjct: 20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL-----NDMYDLIVDGMSFRRLPNRLDPSKLPKQ-----QDNVVSSATRTGSSGSRNSSF--TYNYSNGGYASGSNSR 170
BLAST of NO03G02960 vs. NCBI_GenBank
Match: ETK88603.1 (hypothetical protein L915_07173 [Phytophthora parasitica] >ETL42002.1 hypothetical protein L916_07121 [Phytophthora parasitica]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 0 Query: 24 IYHEVEDVGKTVKATKRRARWTFSFGEKGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSWFE--GNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLP--LKPVHLPSRRAEFDRRDLSSSTTRPTGSLRENDSFEASDDFNPRATTSYSNSK 184 +Y+EV +VGKT++++K+R W E+G+E E+ L HS+ SGKKV+ +G + S +S F G H + + I V++ + MY+L +DG+ F LP L P LP + + ++ SS TR S N SF + +++ S SNS+ Sbjct: 20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL-----NDMYDLIVDGMSFRRLPNRLDPSKLPKQ-----QDNVVSSATRTGSSGSRNSSF--TYNYSNGGYASGSNSR 170
BLAST of NO03G02960 vs. NCBI_GenBank
Match: ETO77439.1 (hypothetical protein F444_07373 [Phytophthora parasitica P1976]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 0 Query: 24 IYHEVEDVGKTVKATKRRARWTFSFGEKGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSWFE--GNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLP--LKPVHLPSRRAEFDRRDLSSSTTRPTGSLRENDSFEASDDFNPRATTSYSNSK 184 +Y+EV +VGKT++++K+R W E+G+E E+ L HS+ SGKKV+ +G + S +S F G H + + I V++ + MY+L +DG+ F LP L P LP + + ++ SS TR S N SF + +++ S SNS+ Sbjct: 20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL-----NDMYDLIVDGMSFRRLPNRLDPSKLPKQ-----QDNVVSSATRTGSSGSRNSSF--TYNYSNGGYASGSNSR 170
BLAST of NO03G02960 vs. NCBI_GenBank
Match: XP_008861793.1 (hypothetical protein H310_00700 [Aphanomyces invadans] >ETW10382.1 hypothetical protein H310_00700 [Aphanomyces invadans]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 23 RIYHEVEDVGKTVKATKRRARWTFSFGEKGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSR---SFSHSWFEGNHALRVDITDIVEVGRGRSDKMYELTLDGVPF 127 R+ H VE+VG + ++K+RA W F+FGE + EVVL+HSV+S KKV+ Y+G + +H +S S N A+ V I + R Y++ +D VP+ Sbjct: 23 RVGHMVENVGGNIASSKKRASWKFTFGESDKVHEVVLLHSVMSAKKVVEYDGREKYHVAAISPGDWSIILMLEHRNSAIEVRINEFESPDMPR----YDMLIDRVPY 125
BLAST of NO03G02960 vs. NCBI_GenBank
Match: XP_002184220.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44398.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 39/127 (30.71%), Postives = 61/127 (48.03%), Query Frame = 0 Query: 18 TEDCFRIYHEVEDVGKTVKATKRRARWTFSF--------GE-----KGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSW-FEGNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLP 131 T ++I GK + ++KRR RW F F GE +G+E +V LV S+ SGK++I +GH++H+S + F SW GNH L++ + + Y+ +DG F P Sbjct: 12 TPQTYQIDFSAVASGKRIASSKRRVRWRFGFANSEALASGETGTACRGEEHDVTLVWSIASGKRLILVDGHEVHYSSSRNAIFDFSWTMRGNHVLKMVAHVSPPLSPTPGFRQYDFFIDGQSFFTFP 138
BLAST of NO03G02960 vs. NCBI_GenBank
Match: KUF75710.1 (hypothetical protein AM587_10005425 [Phytophthora nicotianae]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 0 Query: 24 IYHEVEDVGKTVKATKRRARWTFSFGEKGQESEVVLVHSVVSGKKVITYNGHQIHHSDDMSRSFSHSWFE--GNHALRVDITDIVEVGRGRSDKMYELTLDGVPFGVLP--LKPVHLPSRRAEFDRRDLSSSTTRPTGSLRENDSFEASDDFNPRATTSYSNSK 184 +Y+EV +VGKT++++K+R W E+G+E E+ L HS+ SGKKV+ +G + S +S F G H + + I V++ + MY+L +DG+ F LP L P LP + + ++ SS TR S N SF + +++ S SNS+ Sbjct: 429 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL-----NDMYDLIVDGMSFRRLPNRLDPSKLPKQ-----QDNVVSSATRTGSSGSRNSSF--TYNYSNGGYASGSNSR 579 The following BLAST results are available for this feature:
BLAST of NO03G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02960 ID=NO03G02960|Name=NO03G02960|organism=Nannochloropsis oceanica|type=gene|length=2984bpback to top protein sequence of NO03G02960.1 >NO03G02960.1-protein ID=NO03G02960.1-protein|Name=NO03G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=512bpback to top protein sequence of NO03G02960.2 >NO03G02960.2-protein ID=NO03G02960.2-protein|Name=NO03G02960.2|organism=Nannochloropsis oceanica|type=polypeptide|length=511bpback to top Synonyms
Publications
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