NO03G02810, NO03G02810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02810 vs. NCBI_GenBank
Match: EWM29733.1 (snf7 family protein [Nannochloropsis gaditana]) HSP 1 Score: 343.6 bits (880), Expect = 5.000e-91 Identity = 182/201 (90.55%), Postives = 194/201 (96.52%), Query Frame = 0 Query: 41 MGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGNKLPAVEAPAANDLEQRFAALRK 242 MGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEK+A++KLKKAI++RN EGAR+YAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIV GMDTALKDMDVEKLAK+MDQFEKQFEDTDVRTGYLEGAIASTTAS+TPQEMVD+LIQETADAHNLELGTMLD+AGMV + LPAVEA A N+LEQRF ALRK Sbjct: 1 MGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKDARNKLKKAIQSRNLEGARIYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVAGMDTALKDMDVEKLAKVMDQFEKQFEDTDVRTGYLEGAIASTTASATPQEMVDSLIQETADAHNLELGTMLDNAGMVSDNLPAVEAQATNNLEQRFEALRK 201
BLAST of NO03G02810 vs. NCBI_GenBank
Match: OEU15125.1 (charged multivesicular body protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 220.3 bits (560), Expect = 6.400e-54 Identity = 116/205 (56.59%), Postives = 155/205 (75.61%), Query Frame = 0 Query: 41 MGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGNKLPAVE-----APAANDLEQRFAALR 241 MGN+ SLED +VNLR+ SKQM R +KKCE +EK + KLKKAI+ N EGAR+Y Q+AIREK QALN+LR++SRIDA ++R+E+A+RM QVT M G+V GMD L M+++K++ +MD+FE+QFED DV+T Y+EG + +TTA+STP E VD+LI + ADA+NLELG +AG VG K P+V+ P A+DLE R A L+ Sbjct: 1 MGNRVSLEDEMVNLRIVSKQMQRSAKKCEKNEKASMDKLKKAIQKGNHEGARIYGQDAIREKNQALNHLRMASRIDACSSRIETAVRMGQVTDGMQGVVRGMDKGLASMNIDKISTLMDKFEQQFEDLDVKTQYMEGTMNATTATSTPAEQVDSLIGQVADANNLELGEAFSEAGPVGKKAPSVKESEQAKPVADDLEARLANLK 205
BLAST of NO03G02810 vs. NCBI_GenBank
Match: POM65961.1 (Charged multivesicular body protein 1b-2 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 207.2 bits (526), Expect = 5.600e-50 Identity = 109/207 (52.66%), Postives = 152/207 (73.43%), Query Frame = 0 Query: 39 SVMGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGNKLPAVEA----PAANDLEQRFAALRK 242 ++ K LED L N++ T+K ++R +KKCE ++ K+KLKKAIE N EGA++YAQN IREK QAL+YL+L+SR+DAVAAR+++AI M Q+ M+G+V GMDT ++ M+VEK+++ MDQFEK FED DVR+ Y+EGA++S T+ STP + VD+LIQ AD + L++ LD AG+VG +LP EA + +DL R AALRK Sbjct: 3 NIFSRKNKLEDELFNMKFTAKTLLRNAKKCEKNQVAQKAKLKKAIEQGNMEGAKIYAQNVIREKNQALSYLQLASRMDAVAARVQTAISMGQLKANMSGVVKGMDTVMESMNVEKISQTMDQFEKHFEDMDVRSAYMEGAMSSGTSLSTPADQVDDLIQMVADENGLKIAGQLDSAGLVGTELPTTEAAREKKSQDDLSMRLAALRK 209
BLAST of NO03G02810 vs. NCBI_GenBank
Match: XP_009530801.1 (hypothetical protein PHYSODRAFT_513904 [Phytophthora sojae] >EGZ13372.1 hypothetical protein PHYSODRAFT_513904 [Phytophthora sojae]) HSP 1 Score: 206.8 bits (525), Expect = 7.400e-50 Identity = 109/207 (52.66%), Postives = 152/207 (73.43%), Query Frame = 0 Query: 39 SVMGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGNKLPAVEA----PAANDLEQRFAALRK 242 ++ K LED L N++ T+K ++R +KKCE ++ K+KLKKAIE N EGA++YAQN IREK QAL+YL+L+SR+DAVAAR+++AI M Q+ M+G+V GMDT ++ M+VEK+++ MDQFEK FED DVR+ Y+EGA++S T+ STP + VD+LIQ AD + L++ LD AG+VG +LP EA + +DL R AALRK Sbjct: 3 NIFSRKNKLEDELFNMKFTAKTLLRNAKKCEKNQVAQKAKLKKAIEQGNMEGAKIYAQNVIREKNQALSYLQLASRMDAVAARVQTAISMGQLKANMSGVVKGMDTVMESMNVEKISQTMDQFEKHFEDMDVRSAYMEGAMSSGTSLSTPADQVDDLIQMVADENGLKIAGQLDSAGLVGTELPTTEAAREKKSQDDLTMRLAALRK 209
BLAST of NO03G02810 vs. NCBI_GenBank
Match: XP_002997579.1 (charged multivesicular body protein 1b-2 [Phytophthora infestans T30-4] >EEY68594.1 charged multivesicular body protein 1b-2 [Phytophthora infestans T30-4]) HSP 1 Score: 206.5 bits (524), Expect = 9.600e-50 Identity = 109/207 (52.66%), Postives = 152/207 (73.43%), Query Frame = 0 Query: 39 SVMGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGNKLPAVEA----PAANDLEQRFAALRK 242 ++ K LED L N++ T+K ++R +KKCE ++ K+KLKKAIE N EGA++YAQN IREK QAL+YL+L+SR+DAVAAR+++AI M Q+ M+G+V GMDT ++ M+VEK+++ MDQFEK FED DVR+ Y+EGA++S T+ STP + VD+LIQ AD + L++ LD AG+VG +LP EA + +DL R AALRK Sbjct: 3 NIFSRKNKLEDELFNMKFTAKTLLRNAKKCEKNQVVQKTKLKKAIEQGNMEGAKIYAQNVIREKNQALSYLQLASRMDAVAARVQTAISMGQLKANMSGVVRGMDTVMESMNVEKISQTMDQFEKHFEDMDVRSAYMEGAMSSGTSLSTPADQVDDLIQMVADENGLKVAGQLDSAGLVGTELPTTEAAREKKSQDDLSMRLAALRK 209
BLAST of NO03G02810 vs. NCBI_GenBank
Match: XP_008911168.1 (hypothetical protein PPTG_15648 [Phytophthora parasitica INRA-310] >ETI38080.1 hypothetical protein F443_16093 [Phytophthora parasitica P1569] >ETK78300.1 hypothetical protein L915_15638 [Phytophthora parasitica] >ETL84958.1 hypothetical protein L917_15356 [Phytophthora parasitica] >ETM38127.1 hypothetical protein L914_15489 [Phytophthora parasitica] >ETN03395.1 hypothetical protein PPTG_15648 [Phytophthora parasitica INRA-310] >ETO66851.1 hypothetical protein F444_16078 [Phytophthora parasitica P1976] >ETP36010.1 hypothetical protein F442_15944 [Phytophthora parasitica P10297]) HSP 1 Score: 205.3 bits (521), Expect = 2.100e-49 Identity = 109/207 (52.66%), Postives = 151/207 (72.95%), Query Frame = 0 Query: 39 SVMGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGNKLPAVEA----PAANDLEQRFAALRK 242 ++ K LED L N++ T+K ++R +KKCE ++ K+KLKKAIE N EGA++YAQN IREK QAL+YL+L+SR+DAVAAR+++AI M Q+ M+G+V GMDT ++ M+VEK+++ MDQFEK FED DVR+ Y+EGA++S T+ STP + VD+LIQ AD + L++ LD AG VG +LP EA + +DL R AALRK Sbjct: 3 NIFSRKNKLEDELFNMKFTAKTLLRNAKKCEKNQVAQKAKLKKAIEQGNMEGAKIYAQNVIREKNQALSYLQLASRMDAVAARVQTAISMGQLKANMSGVVKGMDTVMESMNVEKISQTMDQFEKHFEDMDVRSAYMEGAMSSGTSLSTPADQVDDLIQMVADENGLKVAGQLDSAGHVGTELPTTEATREKKSQDDLSMRLAALRK 209
BLAST of NO03G02810 vs. NCBI_GenBank
Match: KUF95942.1 (Charged multivesicular body protein 1 [Phytophthora nicotianae] >KUF96507.1 hypothetical protein AM588_10006710 [Phytophthora nicotianae]) HSP 1 Score: 205.3 bits (521), Expect = 2.100e-49 Identity = 109/207 (52.66%), Postives = 151/207 (72.95%), Query Frame = 0 Query: 39 SVMGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGNKLPAVEA----PAANDLEQRFAALRK 242 ++ K LED L N++ T+K ++R +KKCE ++ K+KLKKAIE N EGA++YAQN IREK QAL+YL+L+SR+DAVAAR+++AI M Q+ M+G+V GMDT ++ M+VEK+++ MDQFEK FED DVR+ Y+EGA++S T+ STP + VD+LIQ AD + L++ LD AG VG +LP EA + +DL R AALRK Sbjct: 2 NIFSRKNKLEDELFNMKFTAKTLLRNAKKCEKNQVAQKAKLKKAIEQGNMEGAKIYAQNVIREKNQALSYLQLASRMDAVAARVQTAISMGQLKANMSGVVKGMDTVMESMNVEKISQTMDQFEKHFEDMDVRSAYMEGAMSSGTSLSTPADQVDDLIQMVADENGLKVAGQLDSAGHVGTELPTTEATREKKSQDDLSMRLAALRK 208
BLAST of NO03G02810 vs. NCBI_GenBank
Match: GAX28111.1 (charged multivesicular body protein 1 [Fistulifera solaris]) HSP 1 Score: 204.9 bits (520), Expect = 2.800e-49 Identity = 106/201 (52.74%), Postives = 150/201 (74.63%), Query Frame = 0 Query: 41 MGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVG-NKLPAVEAPAANDLEQRFAALR 241 MGNK SLE+ ++N+R+ +KQM R ++KC+ +EK A KLKKAI A +E AR+Y Q+AIREK QALN+LR++SR++A +R+E+A+RM QVT +M G+V GMD +++ M++E+L MD+FE+QFED DV+ GY+EG + +TTA+STP E VD LI ADA+NLELG +AG +G K+P + +DLE R A+LR Sbjct: 1 MGNKISLEEEMINMRIVAKQMQRSAQKCQKNEKAAIEKLKKAIAAGLSENARIYGQDAIREKNQALNHLRMASRLEACCSRIETAVRMNQVTSSMKGVVKGMDKSIQSMNIEQLTATMDKFEQQFEDLDVKAGYMEGTMNATTATSTPAEQVDELISAVADANNLELGEAFTEAGPIGKKKVPQEKVGDTSDLEARLASLR 201
BLAST of NO03G02810 vs. NCBI_GenBank
Match: GAX18413.1 (charged multivesicular body protein 1 [Fistulifera solaris]) HSP 1 Score: 204.9 bits (520), Expect = 2.800e-49 Identity = 106/201 (52.74%), Postives = 150/201 (74.63%), Query Frame = 0 Query: 41 MGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVG-NKLPAVEAPAANDLEQRFAALR 241 MGNK SLE+ ++N+R+ +KQM R ++KC+ +EK A KLKKAI A +E AR+Y Q+AIREK QALN+LR++SR++A +R+E+A+RM QVT +M G+V GMD +++ M++E+L MD+FE+QFED DV+ GY+EG + +TTA+STP E VD LI ADA+NLELG +AG +G K+P + +DLE R A+LR Sbjct: 1 MGNKISLEEEMINMRIVAKQMQRSAQKCQKNEKAAIEKLKKAIAANLSENARIYGQDAIREKNQALNHLRMASRLEACCSRIETAVRMNQVTSSMKGVVKGMDKSIQSMNIEQLTATMDKFEQQFEDLDVKAGYMEGTMNATTATSTPAEQVDELISVVADANNLELGEAFTEAGPIGKKKVPQEKIGDTSDLEARLASLR 201
BLAST of NO03G02810 vs. NCBI_GenBank
Match: XP_008879707.1 (hypothetical protein H310_13837 [Aphanomyces invadans] >ETV91781.1 hypothetical protein H310_13837 [Aphanomyces invadans]) HSP 1 Score: 204.1 bits (518), Expect = 4.800e-49 Identity = 112/200 (56.00%), Postives = 145/200 (72.50%), Query Frame = 0 Query: 44 KPSLEDHLVNLRLTSKQMVRGSKKCESSEKEAKSKLKKAIEARNTEGARVYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVTGMDTALKDMDVEKLAKIMDQFEKQFEDTDVRTGYLEGAIASTTASSTPQEMVDNLIQETADAHNLELGTMLDDAGMVGN--KLPAVEAPAANDLEQRFAALRK 242 +P+LED L +R T+K +VR +KKCE ++ K KLK+AIE N EGA++YAQNAIREK QALNYL+LSSRIDAVAAR+++AI M + MAG+V GM+ + M+VEK++K MDQFE+QFED DVR Y+EGA+ STTA +TP + VD+LIQ AD + L + LD AG VG+ +PA A +DL R AALRK Sbjct: 7 RPTLEDELFKMRFTAKSLVRNAKKCEKNQIAQKLKLKQAIEKGNMEGAKIYAQNAIREKNQALNYLQLSSRIDAVAARVQTAISMGNLKSNMAGVVKGMNVVMDSMNVEKISKTMDQFERQFEDLDVRAAYMEGAMNSTTAGATPADQVDDLIQMVADENGLVIAGQLDSAGAVGSHVAVPAPAPQATDDLTARLAALRK 206 The following BLAST results are available for this feature:
BLAST of NO03G02810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02810 ID=NO03G02810|Name=NO03G02810|organism=Nannochloropsis oceanica|type=gene|length=1420bpback to top protein sequence of NO03G02810.1 >NO03G02810.1-protein ID=NO03G02810.1-protein|Name=NO03G02810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=242bpback to top Synonyms
Publications
|