NO03G00910, NO03G00910 (gene) Nannochloropsis oceanica

Overview
NameNO03G00910
Unique NameNO03G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3666
Alignment locationchr3:300922..304587 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:300922..304587 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO03G00910 vs. NCBI_GenBank
Match: XP_002288386.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93822.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 257.7 bits (657), Expect = 1.600e-64
Identity = 229/924 (24.78%), Postives = 410/924 (44.37%), Query Frame = 0
Query:   70 NRIVLSTLAIALLWGTSLNAAIFFTEYFVRIPPAVFPIHVCRTAAREIQVQATSYKQCAARQMATCDIDLEDAAAKERFRSQWAQEQNVARLDMAEAIYSDCGAALATSQAALGAWLKLSSVEMPYVANATQ--CSPDDR-LRTQALLGDSS--GSKTQVMASSVQYSKESRRMVTRLAEHTVALNKYNAEYLANKTLELRSSVLEMIMHVNGLKMGRMNESFGSLRSHLSSLVACVT------PADGE--GTNVCTVLARSARQRL--EGIVKDWQALFDEAAHGFEAYKDNWYRVRDRSESAYSSFVSFYNDVRNGIRKAGLSTSDFGDTFNVDLDLMFVNPGELLDGKGILTDVSPVPSLDEVWTAVRPVVDFFIQNLTMASLETNLRAMEWALALESAFTNW-----NLMPDDYDPPSFLGSDGVAISAKDAAAVHDSLADAFVARTATSLETFDSYNDYVGSLATGATNLSQSNATVLKDNLPRFDFSFNLKYEALAPPNFDMDAFLRVFDSIPQLARLTDTIYRVYSSLRILWRFKTQSTALKLPAVDLRPDIFLARRGSMTWSMLQRLHPRRLLAWVLSSPYLARMLLCTFLFPLFIFAVGMYVAAYRDYQQGCVFRTDSAPSTSSSATPPRYSFATKTLHSLAFNAAAYQGNQAMFDGLKIYNQRRAEYCANFGKAAQTSQLNAMRYLTTLRTAQSETQGKVQLLASCLDMQALDVAFVESCCEVYSNGTAAAPVDTTSAPFIYATCKEDAINNRSLSCPINTNYS-PARPFPPLSFSL-GTSACHAVPNLNSTHRLDGPLWALEDGIFNCEVLPACTPTCSGPHPELLQIWSRHCACSSEWTLHAYVLAGSFVVITYVVLNLARKMLIQGLSQSHWRLLSDGKLTFLGHCDEDGRLLFGPHAALAASTKNNIDKI 972
            NR++L  LAIA  WGTSL  A  F    +  PP       CR A    + +   Y +C   Q+  C+  L+ +  +E  R +   +QN   +   E + + C  + ++ + AL  W   +  ++P   +A    C+ +D+ L  Q L+G  +    +T  M  +  Y  ES   V RLAE+     +Y+A Y+  KT  +++++  ++  V+   +  +++    L     +++AC++       +DG     NV  ++       +   G++K  QAL+D        Y+D     ++  + AY     FYN V N + +  + T   GD F V L  M        D   ++  +    S+D +W+ V P V+ F  NL   S     R   +   ++ A++       ++MPDDYDPP ++G+  +  +  +   +    +D+F+++  ++L  F   ++          N+   N T +K+ +   + SF    E+L  P+ D D +     S+       D I+RVY S++++ ++   +T+L +P VD+R +  +            R+HP R +   ++SP    ++       L      +Y+   + Y  GC+             +    +F TK + S+A+N A + G+  + +G+ +++ +R + C++   ++ T Q N     T       E    + L   C+D   LD  F E+CC     GT   P +  +AP            N  ++CP++   +  A PFP   F L G     +V  ++ T    G  W ++D IF+C+ LP C  TC  P   LL   S  C C+ EW LH+  L  +   + Y+ +N+AR     GL++  W+ +   + T L  CD +G L+     +  AS K+ I+ I
Sbjct:  387 NRMMLCGLAIAFNWGTSLRIANIFASSAINAPPLDAVTGTCRIAYNFTRDERLRYSKCVESQLNQCNSKLDRSIEQEDMRVRLVAKQNEDVVQRMEEVATSCSKSYSSLRLALQGW-TANGGKIPTRVDADDGICTAEDQELFNQTLMGTQNIIALQTDAMDITNAYGDESTLTVVRLAEYVAERAEYDANYVDQKTQRIQNTMFSVVDSVDVTPVS-LDDLLDELDMSAVNVIACLSLDLDARMSDGSKCDPNVAAMVNSFRNNAIWKVGVLK--QALYD--------YRDRMEEYKENVQRAYEVAKRFYNGVNNSVTRWIIDTFFAGDWFRVSLFDMTPVDVTFPDVDQVIGSIGSFQSIDVMWSKVVPDVNSFHVNLDSTSESIKARFTAFIRGMQEAYSASVRLVPSMMPDDYDPPMYVGTSDLISNPDEEVTLFRDKSDSFLSKARSALGMFSGIDNQYDESELD-INVPPFNITEIKNKVTNVELSF----ESLQQPDIDFDLWFLQLSSLSDGFVFLDYIFRVYVSIKLVLKY-WFATSLAMPKVDIRVNKDIKNP--------FRMHPARAVVAFVTSPLGGFVIFVVSSAWLVGIITALYMPLLQSYTSGCI------------GSDGNGTFVTKNIFSIAYNHAYHDGSGLLIEGMDVFDLKRGDTCSSRYASSATLQNNMRSNFTAYANFYQELSKNMGLAQRCVDADDLDSLFKEACC-----GTPTYP-ECATAPL-----------NDGVACPMDERRTIMAIPFP---FELPGNMLKDSVCTISPT----GSDWDIDDAIFSCDELPTCNVTCKAPRKGLLTSSSEQCGCTVEWYLHSKWLGSALAFLLYLFMNIARVFFFSGLTRLLWKWIYPDRFTVLATCDSNGTLVTSSRVS-GASHKDLINAI 1247          
BLAST of NO03G00910 vs. NCBI_GenBank
Match: EJK55870.1 (hypothetical protein THAOC_24342 [Thalassiosira oceanica])

HSP 1 Score: 201.1 bits (510), Expect = 1.800e-47
Identity = 222/979 (22.68%), Postives = 383/979 (39.12%), Query Frame = 0
Query:   70 NRIVLSTLAIALLWGTSLNAAIFFTEYFVRIPPAVFPIHVCRTAAREIQVQATSYKQCAARQMATCDIDLEDAAAKERFRSQWAQEQNVARLDMAEAIYSDCGAALATSQAALGAWLKLSS-VEMPYVANATQCSPDDRLR-TQALLGDSS--GSKTQVMASSVQYSKESRRMVTR--------------LAEHTVALNKYNAEYLANKTLELRSSVLEMIMHVNGLKMGRMNES--FGSLRSHLSSLVACVTPADGEGTNVCTVLARSARQ--------RLEGIVKDWQALFDEAAHGFEAYKDNWYRVRDR----------SESAYSSFVSFYNDVRNGIRKAGLSTSDFGDTFNVDLDLMFVNPGELLDGKGILTDVSPVPSLDEVWTAVRPVVDFFIQNLTMASLETNLRAMEWALALESAFTN--------WNLMPDDYDPPSFLGSDGVAISAKDAAAVHDSLADAFVARTATSLETFDSYNDYVGSLATGATNLSQSNATVLKDNLPRFDFSFNLKYEALAPPNFDMDA-FLRVFDSIPQLARLTDTIYRVYSSLRILWRFKTQSTALKLPAVDLRPDIFLARRGSMTWSMLQRLHPRRLLAWVLSSPYLARMLLCTFLFPLFIFAVGMYVAAYRDYQQGCVFRTDSAPSTSSSATPPRYSFATKTLHSLAFNAAAYQGNQAMFDGLKIYNQRRAEYCANFGKAAQTSQLNAMRYLTTLRTAQSETQGKVQLLASCLDMQALDVAFVESCCEVYSNGTAAAPVDTTSAPFIYATCKEDAINNRSLSCPINTNYSPARP---FPPLSFSLGTSACHAVPNLNSTHRLDGPLWALEDGIFNCEVLPACTPTCSGPHPELLQIWSRHCACSSEWTLHAYVLAGSFVVITYVVLNLARKMLIQGLSQSHWRLLSDGKLTFLGHCDEDGRLLFGPHAALAASTKNNIDKI---TAGGEADDRGAIMAE--NSILRTF 994
            NR+ L  LA+A  WGTSL  A       +  P     +  CRT+    + +   Y  C   QM  C+  L+D+   E  R     ++N A +D      ++C  + A  +     W      V +      + C+ +D  R  Q LLG  +    + QV+    +YSKES   V R              L E+  A   Y+A YL  KT  L+ ++ ++++ ++  K+  +N S     + +    L+AC++            L R AR          L  ++ ++    D+A    +   D  Y  R R                                  S    G+T    +D+ F +   ++ G GI         +D++W  + P +D F   +  ASL ++++     L  +    N          ++PDDYDPP++ G+    +   +  A   + +  FV++  +++    +         T   N+   N T +K        S  L +E    P  D D  FLR+ D       L D ++R+Y S+R++ ++   +T+L  P VD+R +  +            ++HP R L   LSS     +L+      L      +Y+     Y+ GC+   +              +F    L+S+A+N A   G++ + +G   +N +R + C +    +   Q N      T    + ET   V  +  C+D + L   F + CC   S+                    E +    +++CP +     +R    + P   +L + +C    +L+++    G  WA+ D IF+C  L  C  TC  P   LL+    +C C+ EW LHA  +  +   + YV++N AR     GL++  W+ L   + T    CD DG L+       A   +N +  I   T  G ++D    +    +S LR F
Sbjct:   65 NRMALCLLAVACNWGTSLRIANRLATGAIEAPSLDVVVDTCRTSFEITREERARYSNCVESQMNECNSRLDDSIRNEDTRIHELSKENGAIVDRMIEAANNCSQSYAAFRDKTEDWTAAGGRVPLHMAYPESSCTAEDLFRFNQTLLGTQNILAQQAQVIQVVDEYSKESTTTVKRLGSDVSNLTLSTNDLTEYIKARATYDAHYLDQKTQRLQDALYDILVAMDPAKLPPVNVSDLLTGVNAAAVDLLACIS------------LNREARMSDGSRCQPNLASMIHNFS---DDAKQKVQILIDALYEYRQRMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWFGIGETDFFPVDVEFPDVDAIVQGTGIFR------KIDDLWEKITPKIDAFFSGI--ASLPSDVKTRFETLVNDVNLRNSVKILDLLQLVLPDDYDPPTYQGTLRDDLHPAEEIASFQNASREFVSKIRSAIGMISNERKSYHDEGTVDLNIPTFNMTKIKSKAT----SIQLDFEDFQRPEADFDLWFLRLTDLSDGFV-LVDYVFRLYVSIRLILKY-WFATSLPTPTVDIRSNKVVRNP--------LKMHPARALVTFLSSQLGGFILVGLLSVWLVSILTTLYIPLMESYKSGCIVVNEKG------------AFVANNLYSMAYNHAYQDGSRLLVEGTDAFNLKRRDACNSRYTTSAALQNNMTSNFATYSAFRDETSTSVDRVERCIDKRELHSEFRDRCCAYMSDSDC-----------------EGSAKASNMACPFDDGLLYSRNPVIYGPDGLALASPSC----SLDAS----GDDWAINDAIFDCNNLETCPDTCPKPRRNLLKATGEYCGCTFEWYLHAKWMGAALAALLYVLMNGARVFFFSGLTRVLWKYLYPNQFTVFASCDLDGSLITSSSGRRALHHENILRAIQTRTFKGTSNDTSVTLRRKVDSCLRKF 969          
BLAST of NO03G00910 vs. NCBI_GenBank
Match: CBJ29864.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 162.2 bits (409), Expect = 9.200e-36
Identity = 181/776 (23.32%), Postives = 309/776 (39.82%), Query Frame = 0
Query:  195 YVANATQCSPDDRLRTQALLGDSSGSKTQVMASSVQYSKESRRMVT-RLAEHTVALNKYNAEYLANKTLELRSSVLEMIMHVNGLKMGRMNESFGSLRSHLSSLVACVTPADGEGTNV------CTVLARSARQRLEGIVKDWQALFDEAAHGFEAYKDNWYRVRDRSESAYSSFVSFYNDVRNGIRKAGLSTSDFGDTFNVDLDLMFVNPGELLDGKGILTDVSPVPSLDEVWTAVRPVVDFFIQNLTMAS--LETNLRAM--EWALALESAFTNWNLMPDDYDPPSFLGSDGVAISAKDAAAVHDSLADAFVARTATSLETFDSYN---DYVGSLATGATNLSQSNATVLKDNLPRFDFSFNLKYEALAPPNFDMDAFLRVFDSIPQLARLTDTIYRVYSSLRILWRFKTQSTALKLPAVDLRPDIFLARRGSMTWSMLQRLHPRRLLAWVLSSPYLARMLLCTFLFPLFIFAVGMYVAAYRDYQQGCVFRTDSAPSTSSSATPPRYSFATKTLHSLAFNAAAYQGNQAMFDGLKIYNQRRAEYCANFGKAAQTSQLNAMRYLTTLRTAQSETQGKVQLLASCLDMQALDVAFVESCC--EVYSNGTAAAPVDTTSAPFIYATCKEDAINNRSLSCPINTNYSPARPFPPLSFSLGTSACHAVPNLNSTHRLDGPLWALEDGI-FNCEVLPACTPTCSGPHPELLQIWSRHCACSSEWTLHAYVLAGSFVVITYVVLNLARKMLIQGLSQSHWRLLSDGKLTFLGHCDEDGRLL 954
            Y+    + +  + +  Q++  D   S  +V+A     +  +    T  +A   VAL       L N TLE+  S+ E +  ++ L                 +LV+CV+    +          C V   SAR+  +   ++     + A   F+ Y D +      +E +Y ++++FY+ V   +    +  +  G    + +    + P E+    G+L+D     +  E+W  V      +   ++  S  +  ++ A+  EW      A TN  L     D  + L S G    A+         AD + +R+   LE          +  S +  +T L    +TVL   +   D++F     A    +   D+++    +I  L    D I+R  SSLR+  RF ++   L LP  D+R D   A  G     +      RR +  VL  P    +     L  +      +Y   + DY+ GCV ++ +             SF  + ++S+A+N AA +GN+  +   + +  RR   C       +         L ++  A  E       LASC+D   +D  +  +CC  + YSN                 TC     N+  L CP+N      + F PL   L   AC       S   L+   W +EDGI  +C+ +P C  TC GP+ ELLQ  + H  C  EW  HA  +  +  ++ ++ LN++R +L+ G+ + +W  L  G  T+ G C   G L+
Sbjct:  437 YIVQEQREANQECVARQSVYCDLDISNFEVLARDASVASLASTAATFEIAVDAVAL-------LENVTLEIPESISESLEDISALG---------------DALVSCVSLRGEDXXXXXXXXXPCPV--ESARELADAAREELDYQLEVARAAFQEYADTYEAXXXSAEESYDNWIAFYSGVVLLLDDHRVDITGSGPWSVLTVSDFTIPPVEVPSASGVLSDFGDALTSSEIWETVSGAYGNYSDGVSSRSGQITADVEALREEW-----RALTNAALANISTDSSALLDSAGSEFQAE---------ADGYSSRSLALLEGLGPAGPNLSFPASPSLNSTLLVGGASTVLPSPV---DYTF----AAFTATDVSFDSWVVSLGNIALLLLAADYIFRTASSLRLFVRFWSRG-GLGLPDADVRVDKAAASAGGAAAGL------RRGVVRVLIHPATTVLFSAVVLSLVLYNLASVYGPLFADYRAGCVEKSQNG------------SFFGQNVYSVAYNYAAEEGNRDQWTYQEDHTSRRGALCVELTADVRQYLAETDAQLRSMYGAHYEDVTAAATLASCIDTAGMDALYAGACCGYDGYSND----------------TCSSATANSNLLQCPLNYASGVGQAFVPLEVLLSDPAC-------SAETLETANWKVEDGIALDCDTIPTCRMTCVGPNEELLQAVTIHAGCMVEWFFHAGTVRVAATLLMFLFLNVSRIVLVGGVVKLNWSRLHPGVFTYKGTCTRAGELI 1125          
BLAST of NO03G00910 vs. NCBI_GenBank
Match: XP_005760941.1 (hypothetical protein EMIHUDRAFT_459963 [Emiliania huxleyi CCMP1516] >XP_005786294.1 hypothetical protein EMIHUDRAFT_455688 [Emiliania huxleyi CCMP1516] >EOD08512.1 hypothetical protein EMIHUDRAFT_459963 [Emiliania huxleyi CCMP1516] >EOD33865.1 hypothetical protein EMIHUDRAFT_455688 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 135.2 bits (339), Expect = 1.200e-27
Identity = 207/943 (21.95%), Postives = 358/943 (37.96%), Query Frame = 0
Query:   69 WNRIVLSTLAIALLWGTSLNAAIFFTEYFVRIPPAVFPIHVCRTAAREIQVQATSYKQCAARQMATCDIDLEDAAAKERFRSQWAQEQNVARLDMAEAIYSDCGAALATSQAALGAWLKLSSVE-MPYVANATQCSPDDRLRTQALLGDSSGSKTQVMASSVQYSKESRRMVTRL--AEHTVALNKYNAEYLANKTLELRSSVLEMIMHVNGLKMGRMNESFGSLRSHLSSLVACVTPADGEGTNVCTVLARSARQRLEGIVKDWQALFDEAAHGFEAYKDNWYRVRDRSESAYSSFVSFYNDVRNGIRKAGLSTSDFGDTFNVDLDLMFVNPGELLDG-KGILTDVSPVPSLDEVWTAVRPVVDFFIQNLTMASLETNLRAMEWALALESAFTNWNLMPDDYDPPSFLGSDGVAISAKDAAAVHDSLADAFVARTATSLETFDSYNDYVGSLATGATNL-----SQSNATVLKDNLPRFDFS--FNLKYEALAPPNFDMDAFLRVFDSIPQLARLTDTIYRVYSSLRILWRFKTQSTALKLPAVDLR-----PDIFLARRGS---MTWSMLQRLHPRRLLAWVLSSPYLARMLLCTFLFPLFIFAVGMYVAAYRDYQQGCVFRTDSAPSTSSSATPPRY-SFATKTLHSLAFNAAAYQGNQAMFDGLKIYNQRRAEYCANFGKAAQTSQLNAMRYLTTLRTAQSETQGKVQLLASCLDMQALDVAFVESCCEVYSNGTAAAPVDTT------------------------SAPFIYATCKEDAINNRSLSCPINTNY-----------SPARPFPPLSFSLG-TSACHAVPNL-----NSTHRLDGPLWALEDGIFNCEVLPACTPTCSGPHPELLQIWSRHCACSSEWTLHAYVLAGSFVVITYVVLNLARKMLIQGLSQSHWRLLS-DGKLTFLGHCDED 950
            +++++L T+AI+L+W +SL  A F  +  +  PP       C     ++  +   +  C + QM+ CD  LE AAA E  RS  A +Q    L   E +   C      S   +   L++     +P V +   C+P +    + LLGD+S  K + MA +   S        R   A  T A  +Y+++Y+ N +        +  +   G     + +    ++  L  L   ++       ++  +   +A    + I K   A+  +AA   E     + +  +  E       +    V +GI                  D  F  P   L G   I   +       +V+TA                L   +  +          T   ++P  YDPP         ++  +A A     A+ F+A+ A++++          ++  GA N+     + S + V   ++     S  F+ K E       D+       D+I  +A   D ++RVY S R++ ++  +S+   +P +DLR       + L    S   +  S + R +P RL    + SPY A       +  +      +Y+ ++  Y +GC+              PPR  ++  + L S A+N AA  G++ +  GL++YN+RR+  CA + + +   Q  A           +     + L   CLD         E    V S    +   D                          +A   +A    D+I +      ++                 R     + +LG T+A  A   L       T  L      L DG+F+CE LP C  TC+GP+ E+L ++S  C C SEW  H +VL     ++ YV + +AR +L++G+ +  WR L    +L  LG  D D
Sbjct:   82 FSKVMLCTIAISLVWMSSLGVARFIVQSAIASPPFSVVSFECMRGWDKMVSEKEGHTACTSVQMSQCDAALEGAAADEVARSTAASDQVDQMLHRVETLKMRC----TNSHVRIMDGLEMIGRRGVPLVWSNDSCTPREVEAARQLLGDASREKQEAMAVAQARSPPLAAPFPRRFHAVSTKARAEYDSQYMYNSS--------KGFIDAAGAAKDGVEDEIAKMQDRLDMLNMSLSFCTDSACDIPILQEMAA--LTDQIKKMNMAMMQQAAQWSE-----YAKAAESMERWMKQNAAKMQQVMSGI------------------DPNFNLPDFNLPGIPNINIPLXXXXXXXDVYTAXXXXXXXXXXXXXXXYLADAMGGLXXXXXXLDPITGLEILP-GYDPP--------PLNIANATAEMAQAAEDFLAKQASAID----------NIVGGAANMMGIGDNSSGSWVFNWSMSDMTDSSNFDWKVEGFHALEMDIMGLKISIDNIFTMAVWADVVWRVYISTRLVIKYWFRSSE-AIPPLDLRRATLQQGVMLTGAASVFELACSFIARFNPVRLCMSYILSPYSAAAFGGFLMLFVLNAVTQVYMFSFYAYVEGCI-------------EPPRNGTWVCENLFSAAYNYAAGDGDKTLLAGLQVYNERRSRECATYLQPSAQHQTTAXXXXXXXXXXXALDAAGIALAKKCLDFDKTAAGDPEIVLSVASQAALSRTPDDAACFGDICAGDPLAGWGNMSSGGWPNASQAFADADLDSIKDSLAENGLDAGSLSGMASGFDWGGRRRLIEGATRALGPTTAAAAASELRKLLDTGTPCLQDVNATLPDGVFSCEELPPCEVTCAGPNREVLGLFSNRCGCHSEWLFHGFVLQILLAILVYVSMQVARTLLVEGVLRITWRRLHVYAELEVLGTADLD 954          
BLAST of NO03G00910 vs. NCBI_GenBank
Match: GBG26227.1 (Hypothetical Protein FCC1311_024482 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 69.7 bits (169), Expect = 6.200e-8
Identity = 31/94 (32.98%), Postives = 53/94 (56.38%), Query Frame = 0
Query:  861 DGIFNCEVLPACTPTCSGPHPELLQIWSRHCACSSEWTLHAYVLAGSFVVITYVVLNLARKMLIQGLSQSHWRLLSDGKLTFLGHCDEDGRLLF 955
            D  ++C  + AC   CSGP+  +L+  + + AC+SEW  HA +L     ++ Y+  NLAR + + G+ +  WR LS  +   +  C EDG +++
Sbjct:  891 DRTYDCNNIAACDFECSGPNEAILRGVTFNTACTSEWYAHAELLCFFCAILGYITSNLARLIFLNGIVKVSWRHLSSHRFALIASCREDGSIVY 984          
The following BLAST results are available for this feature:
BLAST of NO03G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 5
Match NameE-valueIdentityDescription
XP_002288386.11.600e-6424.78predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK55870.11.800e-4722.68hypothetical protein THAOC_24342 [Thalassiosira oc... [more]
CBJ29864.19.200e-3623.32conserved unknown protein [Ectocarpus siliculosus][more]
XP_005760941.11.200e-2721.95hypothetical protein EMIHUDRAFT_459963 [Emiliania ... [more]
GBG26227.16.200e-832.98Hypothetical Protein FCC1311_024482 [Aurantiochytr... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005826NSK005826Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00910.1NO03G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|645291gene_1261Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00910.1NO03G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00910 ID=NO03G00910|Name=NO03G00910|organism=Nannochloropsis oceanica|type=gene|length=3666bp
TGCTGTCCACACCCACGCCACTCGGACATGATAGCCAGATATACACTGAT
ACCACCGACCTCTTCGTTTACTCCATCCTTGCCCTGTAACATGAATCCAG
ATAATCCTGAAAGGAGGCACGCTTGCGTAAACACTTACTGTGTATTTGTC
TGCGGATAGTTCGCACGCGATAATTTTAGAATTGTAGGAAATCGCAGAAA
ATGGGGGAGGTGGTGCTCGTTTTATCGATGTGTGACGTCATAAAAAACTT
AATGGGCCGCTTTTTCACTTTACCTTGACCTCTTTCTCCATTCACATGTC
AGTGCACACACAAAACCACAACACAAGGAAGATGTCAAAATTTGCGCCTT
TGCCCAAGTCGCCCCGTGTGACGCCCTTGCCACAGAGCGACCAGAGCCAT
GACGATTCACCCCCGCCCGTGTCTTCTTCGCCCCCGTCGCCTCCCTCTAC
CCCTCTGTCATCAGACATTTCACCCCGCATCGGTAGCCACCAATTGATAT
GGAATCGCATTGTACTGAGCACCCTAGCCATAGCCTTGCTATGGGGGACT
TCTCTGAACGCAGCCATCTTCTTCACGGAATATTTTGTGCGCATTCCACC
AGCCGTATTTCCAATCCACGTCTGTCGGACGGCGGCGCGCGAAATTCAGG
TACAAGCAACGTCCTACAAGCAATGTGCGGCCCGGCAAATGGCTACTTGC
GACATCGATTTGGAAGATGCGGCTGCAAAGGAAAGATTCCGGTCGCAGTG
GGCACAAGAGCAAAACGTGGCGCGGTTGGACATGGCTGAAGCCATCTACA
Ggtactttttcgtcctcggaaaaggagagtccagtgtgggatgctttaag
ccgtacttttcaattaatatcctccatctttgtcccccttcacttccagT
GATTGTGGTGCGGCGTTAGCCACCTCCCAGGCCGCCTTGGGCGCGTGGCT
CAAGCTCTCTTCTGTCGAGATGCCCTACGTGGCCAATGCGACGCAGTGTT
CCCCCGACGACCGTTTACGCACTCAGGCCCTGCTTGGCGATTCCAGCGGA
AGCAAGACGCAAGTCATGGCCTCCTCAGTGCAATACAGCAAGGAAAGCAG
GAGAATGGTGACCCGCTTAGCCGAGCACACGGTGGCCTTGAACAAATACA
ATGCCGAGTACTTGGCCAATAAAACCCTAGAGCTTCGCTCGTCCGTTTTG
GAAATGATCATGCATGTAAACGGATTGAAAATGGGAAGGATGAATGAAAG
CTTTGGAAGCCTCCGAAGCCATCTCAGCAGCCTGGTGGCCTGTGTGACTC
CCGCTGATGGTGAAGGCACGAATGTATGCACAGTCTTGGCCCGCAGCGCC
CGGCAACGGCTCGAGGGCATCGTGAAAGATTGGCAAGCCTTGTTCGACGA
GGCAGCTCATGGCTTTGAAGCGTACAAAGACAATTGGTACAGAGTTCGAG
ATCGTAGCGAATCCGCCTATTCAAGCTTCGTGTCATTCTACAATGATGTT
CGTAACGGTATCCGCAAAGCTGGCCTGAGCACGAGCGACTTTGGTGATAC
CTTCAACGTTGATCTCGACTTGATGTTTGTCAATCCTGGCGAGCTCTTGG
ATGGTAAGGGCATCTTGACCGACGTGTCACCCGTGCCGTCACTTGATGAA
GTGTGGACAGCGGTGCGGCCTGTGGTGGACTTTTTCATTCAAAACCTGAC
TATGGCGTCGCTGGAGACCAATTTGCGGGCCATGGAATGGGCGCTAGCTC
TCGAGTCTGCCTTTACAAATTGGAACTTGATGCCAGATGACTACGATCCG
CCCTCTTTTTTGGGAAGCGATGGGGTCGCCATCTCTGCAAAGGATGCAGC
CGCTGTACATGACTCGCTGGCCGATGCTTTTGTCGCGCGAACCGCTACCT
CTTTAGAGACCTTTGACAGCTACAACGATTATGTAGGTAGCCTCGCGACA
GGTGCTACGAATCTATCACAAAGCAATGCCACCGTATTAAAAGACAACCT
GCCGCGCTTCGACTTTTCATTCAACCTGAAATACGAGGCCCTAGCCCCGC
CCAACTTTGACATGGACGCTTTCCTTCGCGTATTTGACTCAATCCCTCAG
CTGGCCCGTCTAACTGACACGATCTACCGTGTTTATAGCAGTCTACGCAT
CCTCTGGCGCTTCAAAACACAGTCCACGGCGCTTAAATTACCTGCGGTTG
ACTTACGCCCTGACATCTTCCTAGCGCGGCGGGGGAGCATGACTTGGAGC
ATGCTGCAACGGCTGCACCCTCGTCGGCTACTGGCGTGGGTGCTATCTTC
GCCTTACCTGGCCCGCATGCTGCTTTGTACGTTCTTGTTCCCGCTCTTCA
TCTTTGCTGTTGGCATGTACGTGGCTGCGTATCGCGATTACCAGCAAGGC
TGCGTCTTCCGCACCGACAGTGCGCCCTCGACGTCCTCTTCCGCCACTCC
ACCGCGTTATTCATTTGCGACCAAGACGTTACATTCTTTAGCATTCAATG
CGGCGGCTTACCAAGGAAACCAAGCTATGTTTGACGGCCTCAAAATTTAC
AATCAACGCAGGGCCGAGTACTGCGCCAACTTCGGCAAGGCTGCTCAGAC
GTCGCAACTAAATGCGATGCGATACCTAACAACCTTACGCACTGCCCAGT
CAGAAACACAGGGCAAGGTACAGCTACTGGCTTCATGTCTGGACATGCAA
GCGCTGGATGTCGCATTTGTAGAAAGCTGCTGCGAGGTCTACAGTAATGG
GACCGCTGCTGCGCCTGTTGATACGACATCAGCGCCGTTTATCTATGCTA
CTTGTAAAGAGGATGCCATCAATAACCGCTCGTTGTCCTGCCCGATCAAT
ACCAACTATTCTCCAGCCCGTCCCTTTCCACCGTTATCCTTTAGCCTAGG
GACATCTGCATGTCATGCAGTCCCCAATCTAAATAGCACACATAGATTGG
ATGGCCCACTGTGGGCTTTAGAAGACGGCATTTTTAATTGCGAAGTGCTC
CCCGCTTGCACCCCTACCTGCTCGGGCCCTCACCCGGAGCTCCTCCAGAT
TTGGTCCCGACATTGCGCATGCAGTAGCGAGTGGACCCTTCATGCCTATG
TCTTGGCCGGTTCATTTGTTGTGATTACTTATGTGGTGCTAAATTTGGCC
CGTAAAATGTTAATACAGGGTCTAAGTCAATCTCATTGGCGCCTCCTGTC
CGATGGCAAGCTCACCTTTCTTGGACACTGCGACGAGGACGGCCGGTTGC
TCTTCGGTCCCCACGCGGCGCTTGCAGCAAGCACAAAGAACAACATTGAC
AAGATTACAGCAGGCGGAGAAGCAGACGATAGGGGGGCTATTATGGCGGA
AAACTCTATTCTCCGCACATTTGTACAGCCGTCAACTTCTTCTCCGAGGG
GTCAAGCAGCAGTAACACAGGAAAGTTACAGAGAACCAGAGGACGATGTT
GCTGCCCAAGAAGAGGTCAACACCCGAACCTTCATTCACAGCAAAGTAGA
CTTAGTCATGCAAGCATATGAATGGCAAGGGTGCGTGATGACGGTCCTAG
CCATGATTTTGGTGGTGGCAGGATTTGTGTTGCTAACAAAGGCACCGCAA
TATTTGCAGTACAACCCCTAGAGGACGGAAAAAAAGATGGGGGTAATGCA
ACGAAAAATGTGCCGT
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protein sequence of NO03G00910.1

>NO03G00910.1-protein ID=NO03G00910.1-protein|Name=NO03G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1076bp
MSVHTQNHNTRKMSKFAPLPKSPRVTPLPQSDQSHDDSPPPVSSSPPSPP
STPLSSDISPRIGSHQLIWNRIVLSTLAIALLWGTSLNAAIFFTEYFVRI
PPAVFPIHVCRTAAREIQVQATSYKQCAARQMATCDIDLEDAAAKERFRS
QWAQEQNVARLDMAEAIYSDCGAALATSQAALGAWLKLSSVEMPYVANAT
QCSPDDRLRTQALLGDSSGSKTQVMASSVQYSKESRRMVTRLAEHTVALN
KYNAEYLANKTLELRSSVLEMIMHVNGLKMGRMNESFGSLRSHLSSLVAC
VTPADGEGTNVCTVLARSARQRLEGIVKDWQALFDEAAHGFEAYKDNWYR
VRDRSESAYSSFVSFYNDVRNGIRKAGLSTSDFGDTFNVDLDLMFVNPGE
LLDGKGILTDVSPVPSLDEVWTAVRPVVDFFIQNLTMASLETNLRAMEWA
LALESAFTNWNLMPDDYDPPSFLGSDGVAISAKDAAAVHDSLADAFVART
ATSLETFDSYNDYVGSLATGATNLSQSNATVLKDNLPRFDFSFNLKYEAL
APPNFDMDAFLRVFDSIPQLARLTDTIYRVYSSLRILWRFKTQSTALKLP
AVDLRPDIFLARRGSMTWSMLQRLHPRRLLAWVLSSPYLARMLLCTFLFP
LFIFAVGMYVAAYRDYQQGCVFRTDSAPSTSSSATPPRYSFATKTLHSLA
FNAAAYQGNQAMFDGLKIYNQRRAEYCANFGKAAQTSQLNAMRYLTTLRT
AQSETQGKVQLLASCLDMQALDVAFVESCCEVYSNGTAAAPVDTTSAPFI
YATCKEDAINNRSLSCPINTNYSPARPFPPLSFSLGTSACHAVPNLNSTH
RLDGPLWALEDGIFNCEVLPACTPTCSGPHPELLQIWSRHCACSSEWTLH
AYVLAGSFVVITYVVLNLARKMLIQGLSQSHWRLLSDGKLTFLGHCDEDG
RLLFGPHAALAASTKNNIDKITAGGEADDRGAIMAENSILRTFVQPSTSS
PRGQAAVTQESYREPEDDVAAQEEVNTRTFIHSKVDLVMQAYEWQGCVMT
VLAMILVVAGFVLLTKAPQYLQYNP*
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Synonyms
Publications