NO03G00900, NO03G00900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO03G00900 vs. NCBI_GenBank
Match: EWM25637.1 (hypothetical protein Naga_100037g11 [Nannochloropsis gaditana] >EWM25638.1 hypothetical protein Naga_100037g11 [Nannochloropsis gaditana]) HSP 1 Score: 239.6 bits (610), Expect = 4.500e-59 Identity = 128/275 (46.55%), Postives = 178/275 (64.73%), Query Frame = 0 Query: 123 WAMLGELAAPPGLQQYEHCETAARIFGQIASRLKATGELQQFKALAIIRTWDMYCYRHKVDITCGATSSLLRVLAFPGPEGVVLAPQVKVQEDPSLACRPMDELLDPAFMPAYVAGLQEGGIAAVCGFVYANGVFRLWADDNFASEYFDTEEANARFAATAVLPSYLFGLIVAPASRVKFYQLLVQYMLTETKGTTTMSMVTDTVGRDGGIVAKLLRVRHVVLNQGQYACLAMNLLPLDSYGLTAPRAAGAVSAGDSSSSFGLASL-LRPMQASQ 397 W + GEL P GL+QY+HC AAR F Q+A++LKA G+LQ KALAIIRTW+ C +KVD TCG T+ LLRVLA P P GV PQV+++ D SL +D+L++P MPA V L+E ++ CGFV+A+G FR+W +D F++EY TE+ N A T +LP + FG I +PASR FY+ + ++ML ++ T SMV++TVGRDG ++ +L+ +R+ +LN GQ + AMNL PL+ Y A + A S SS+ L L P S+ Sbjct: 18 WTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLWLLSIDKLMEPKNMPATVRSLREEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLE-YSNAAVHDSIATSVSFSSTLISTPQLSLSPRSMSR 291
BLAST of NO03G00900 vs. NCBI_GenBank
Match: EWM29550.1 (hypothetical protein Naga_100006g18 [Nannochloropsis gaditana] >EWM29551.1 hypothetical protein Naga_100006g18 [Nannochloropsis gaditana]) HSP 1 Score: 224.2 bits (570), Expect = 2.000e-54 Identity = 117/247 (47.37%), Postives = 152/247 (61.54%), Query Frame = 0 Query: 120 PPGWAMLGELAAPPGLQQYEHCETAARIFGQIASRLKATGELQQFKALAIIRTWDMYCYRHKVDITCGATSSLLRVLAFPGPEGVVLAPQVKVQEDPSL-ACRPMDELLDPAFMPAYVAGL-----QEGGIAAVCGFVYANGVFRLWADDNFASEYFDTEEANARFAATAVLPSYLFGLIVAPASRVKFYQLLVQYMLTETKGTTTMSMVTDTVGRDGGIVAKLLRVRHVVLNQGQYACLAMNLLPL 361 PPGWA++GEL + PGL + HC AA F I RL+ G LQ +K I+R WD+YCYR K D+TCGA L R+LA P P GV + Q +QE+ S+ RP++E L P MP YV L +EG AAVCG+ Y NG F+LW D FA +Y+ EANARF AVLP YL+G + P R FY+LLV+Y+LT+ ++MV + + DG A L++ RH V+N GQY AM+ LPL Sbjct: 9 PPGWALVGELQSAPGLDRLSHCRLAATTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEG--AAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPL 253
BLAST of NO03G00900 vs. NCBI_GenBank
Match: XP_005852521.1 (hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526] >EKU23311.1 hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 223.0 bits (567), Expect = 4.400e-54 Identity = 116/247 (46.96%), Postives = 152/247 (61.54%), Query Frame = 0 Query: 120 PPGWAMLGELAAPPGLQQYEHCETAARIFGQIASRLKATGELQQFKALAIIRTWDMYCYRHKVDITCGATSSLLRVLAFPGPEGVVLAPQVKVQEDPSL-ACRPMDELLDPAFMPAYVAGL-----QEGGIAAVCGFVYANGVFRLWADDNFASEYFDTEEANARFAATAVLPSYLFGLIVAPASRVKFYQLLVQYMLTETKGTTTMSMVTDTVGRDGGIVAKLLRVRHVVLNQGQYACLAMNLLPL 361 PPGWA++GEL + PGL + HC A+ F I RL+ G LQ +K I+R WD+YCYR K D+TCGA L R+LA P P GV + Q +QE+ S+ RP++E L P MP YV L +EG AAVCG+ Y NG F+LW D FA +Y+ EANARF AVLP YL+G + P R FY+LLV+Y+LT+ ++MV + + DG A L++ RH V+N GQY AM+ LPL Sbjct: 9 PPGWALVGELQSAPGLDRLSHCRLASTTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEG--AAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPL 253
BLAST of NO03G00900 vs. NCBI_GenBank
Match: EWM28051.1 (fungal specific transcription [Nannochloropsis gaditana]) HSP 1 Score: 205.3 bits (521), Expect = 9.500e-49 Identity = 100/252 (39.68%), Postives = 150/252 (59.52%), Query Frame = 0 Query: 120 PPGWAMLGELAAPPGLQQYEHCETAARIFGQIASRLKATGELQQFKALAIIRTWDMYCYRHKVDITCGATSSLLRVLAF-----------PGPEGVVLAPQVKVQEDPSLACRPMDELLDPAFMPAYVAGLQEGGIAAVCGFVYANGVFRLWADDNFASEYFDTEEANARFAATAVLPSYLFGLIVAPASRVKFYQLLVQYMLTETKGTTTMSMVTDTVGRDGGIVAKLLRVRHVVLNQGQYACLAMNLLPL 361 PP WA++ L PPGL+ Y+HC+T A +FG+ R+ TG LQ K LAI+RTWD Y ++H +DI+CGA+++++RVLA E V + V+ + L + LD A MP+YV+ LQ+GG +AV G+VY +G +RLW FA + N+ F T +LP +LFG +AP R FY+ L++YML T+ M++ D + DG + L+R R++VLN+GQY+C A++ L + Sbjct: 581 PPSWALMAVLQPPPGLRYYDHCKTTAPLFGETVLRMIDTGRLQHLKTLAILRTWDFYNHKHGIDISCGASAAIVRVLALRKSAAYTSGSGESSESVGTNAEQPVEWNDDLLAMDRQDALDQAHMPSYVSSLQDGGDSAVGGYVYCSGQYRLWTGKRFADRFMTASTVNSLFDQTKILPCFLFGSFLAPNDRPNFYRSLIEYMLGPTREGREMTVTADVMELDGHVFKALVRARYMVLNEGQYSCFALSFLQI 832
BLAST of NO03G00900 vs. NCBI_GenBank
Match: EWM29539.1 (hypothetical protein Naga_100006g24 [Nannochloropsis gaditana]) HSP 1 Score: 198.0 bits (502), Expect = 1.500e-46 Identity = 107/243 (44.03%), Postives = 142/243 (58.44%), Query Frame = 0 Query: 138 YEHCETAARIFGQIASRLKATGELQQFKALAIIRTWDMYCYRHKVDITCGATSSLLRVLAFPGPEGVVLAPQVKVQEDPSLACRPMDELLDPAFMPAYVAGLQEGGIAAVCGFVYANGVFRLWADDNFASEYFDTEEANARFAATAVLPSYLFGLIVAPASRVKFYQLLVQYMLTETKGTTTMSMVTDTVGRDGGIVAKLLRVRHVVLNQGQYACLAMNLLPLDSYGLTAPRAAGAVSAGDSS 381 YE A FG++ +RLK +GELQ +ALAII TWD +VD++CGA + +LR LA QV V+ S+AC P ELL+ +PA+VA L EG +A CGF+Y G FR+W D NF++ YFD EEAN VLP YLFG I+ + +F+ L +ML + TMSMV T+GRD + LLR+R+VV N G YACLA+N+LP+D G + A + SS Sbjct: 62 YECSSEAVLTFGRVTARLKTSGELQHERALAIIHTWDTTSRAQRVDVSCGAANLILRALASLNSTYASPVLQVPVRFGTSVACCPAGELLEGVHVPAFVAELDEGATSASCGFIYTGGEFRIWTDLNFSARYFDAEEANVYHIQAGVLPCYLFGCIIHRTYQEQFFDRLAVHMLKDNTEEKTMSMVAQTLGRDQVVTQNLLRIRYVVRNSGHYACLALNVLPIDYPGAMNGESPAATPSALSS 304
BLAST of NO03G00900 vs. NCBI_GenBank
Match: EWM27081.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 70.9 bits (172), Expect = 2.800e-8 Identity = 56/259 (21.62%), Postives = 99/259 (38.22%), Query Frame = 0 Query: 153 SRLKATGELQQFKALAIIRTWDMYCYRHKVDITCGATSSLLRVLAFPGPEGVVLAPQVKVQEDPSLACRPMDEL--------------------------------LDPAFMPAYVAGLQEGGIAAVCGFVYANGVFRLWADDNFASEYFDTEEANARFAATAVLPSYLFGLIVAPASRVKFYQLLVQYMLTETKGTTTMSMVTDTVGRDGGIVAKLLRVRHVVLNQGQYAC--LAMNLLPLDSYGLTAPRAAGAVSAG 378 S L +G + + K A++R W ++ + VD+T G S L ++ + + Q + S P D+ LDP + ++A L +G A +C G +++ +D F S +F +E+ R + + LP Y++ I+AP R +F L ++ + + R G ++R+R + LN G Y L + P+ Y L AG G Sbjct: 116 SNLLKSGAVHRMKTFAVLRVWMLFSMYYGVDLTRGFLSVALALM-----DASIQDLQRLPETMASSVALPPDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLDPGVLQPFIASLDDGVSAVICCVGCRGGTGKVYCNDKFKSTFFSSEDLTQRTLSESTLPVYVYACIIAPEDRAEFVDSLTNVCFGTQTALPQVTHIVKVLDRQGSDFLAIVRLRCLTLNNGDYGADILTVEPAPMSKYVLQTSDGAGTGQEG 369 The following BLAST results are available for this feature:
BLAST of NO03G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00900 ID=NO03G00900|Name=NO03G00900|organism=Nannochloropsis oceanica|type=gene|length=4381bpback to top protein sequence of NO03G00900.1 >NO03G00900.1-protein ID=NO03G00900.1-protein|Name=NO03G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1072bpback to top Synonyms
Publications
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