NO03G00590, NO03G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00590 vs. NCBI_GenBank
Match: EWM29486.1 (hypothetical protein Naga_100928g3 [Nannochloropsis gaditana]) HSP 1 Score: 378.6 bits (971), Expect = 1.600e-101 Identity = 220/350 (62.86%), Postives = 238/350 (68.00%), Query Frame = 0 Query: 11 LLVLLPLLVHAF----RLPS----------TSTXXXXXXXXXXXXXXXXXXXXXXXVVDRLFSLFFGAKEAKPLGFDRISVEKSPEVYPATTTKFADPVPGDSRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPE----------------------------------------------------------------------------GWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYAIDDNPSLALKFGYEDFLLKLTTDRKAVSKLGLAYAKLPGGATSLFAPSEGKTAEIVDLKVYARQGR 271 LL++LP++V+AF R+PS T+T XXXXXXXXXXXX D+LFSLFFGAKEAKPLGF RISVE SPEVYPATT+ FADP+PGDSRDVAALRPLLAQTRLEKA LNLIYDA +DGWKKGDFHRKVDNRGA+LVVARTRGGAVCGGYNPE GWEGVGDERQCISAFLFTWPQGKM A+RPIKCPKVGGA YA+DDNP+LA+KFGYEDF LKLTTDRKA+SKLGLAYAKLPGGATSLFAPSEGK AEIVDLKVYAR+GR Sbjct: 10 LLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLAXXXXXXXXXXXXXXDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPXXXXXXXXXXXXQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGYEDFSLKLTTDRKAISKLGLAYAKLPGGATSLFAPSEGKMAEIVDLKVYARKGR 359
BLAST of NO03G00590 vs. NCBI_GenBank
Match: EWM29487.1 (hypothetical protein Naga_100928g3 [Nannochloropsis gaditana]) HSP 1 Score: 282.0 bits (720), Expect = 2.000e-72 Identity = 172/302 (56.95%), Postives = 188/302 (62.25%), Query Frame = 0 Query: 11 LLVLLPLLVHAF----RLPS----------TSTXXXXXXXXXXXXXXXXXXXXXXXVVDRLFSLFFGAKEAKPLGFDRISVEKSPEVYPATTTKFADPVPGDSRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPE----------------------------------------------------------------------------GWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYAIDDNPSLALKFGYEDFLL 223 LL++LP++V+AF R+PS T+T XXXXXXXXXXXX D+LFSLFFGAKEAKPLGF RISVE SPEVYPATT+ FADP+PGDSRDVAALRPLLAQTRLEKA LNLIYDA +DGWKKGDFHRKVDNRGA+LVVARTRGGAVCGGYNPE GWEGVGDERQCISAFLFTWPQGKM A+RPIKCPKVGGA YA+DDNP+LA+KFG F L Sbjct: 10 LLLVLPVVVYAFVSPARVPSSCTLPSSSIITATCLAPSLIHRLAXXXXXXXXXXXXXXDKLFSLFFGAKEAKPLGFARISVESSPEVYPATTSIFADPLPGDSRDVAALRPLLAQTRLEKAPLNLIYDAVRDGWKKGDFHRKVDNRGATLVVARTRGGAVCGGYNPEVGREGEGGEWAGGVDGGHDAAEKDAGGRGGVHLYTHTRRQRKENGFHRTPSSPGIRMLSFLPPXXXXXXXXXXXXQGWEGVGDERQCISAFLFTWPQGKMRASRPIKCPKVGGASYAVDDNPALAIKFGCGAFFL 311
BLAST of NO03G00590 vs. NCBI_GenBank
Match: OSX79122.1 (hypothetical protein BU14_0086s0009, partial [Porphyra umbilicalis]) HSP 1 Score: 206.5 bits (524), Expect = 1.100e-49 Identity = 110/223 (49.33%), Postives = 135/223 (60.54%), Query Frame = 0 Query: 54 VDRLFSLFFGAKEAKPLGFDRISVEKSPEVYPATTTKFADPVPGDSRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYAIDDNPSLALKFGYEDFLLKL----------TTDRKAVSKLGLAYAKLPGGATSLFAPSE-GKTAEIVDLKVY 266 ++RLF+ FFGA EA+PLG R ++ PE+YPAT T+ A PV GD +VA RPLLA+T+L L L YDA DGW FH VD RGAS+V+ART GGAVCGGYNP+GW G G+ R I+AFLFTWP G RPIK KVG A+ D P FG + ++ L DR A SKLG + +LP G LFAP+E G + L+VY Sbjct: 2 IERLFTFFFGAIEAEPLGLKRFDRDRFPELYPATLTETAPPVDGDGPEVALFRPLLARTQLASRPLRLAYDATVDGWTAEAFHGAVDFRGASVVLARTAGGAVCGGYNPKGWVGYGEARGSIAAFLFTWPTGDTAGGRPIKLRKVGRGATAVIDTPEDGPTFGADALVVPLQPPRAGWATDERDRVARSKLGSYFERLPNGRNHLFAPTEAGAGVTLEWLRVY 224
BLAST of NO03G00590 vs. NCBI_GenBank
Match: PRW18377.1 (Interferon-induced 44 family [Chlorella sorokiniana]) HSP 1 Score: 203.8 bits (517), Expect = 7.000e-49 Identity = 109/224 (48.66%), Postives = 143/224 (63.84%), Query Frame = 0 Query: 53 VVDRLFSLFFG---AKEAKPLGFDRISVEKSPEVYPATTTKFADPVPGDSRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYA-IDDNPSLALKFGYEDFLLKLT--TDRKAVSKLGLAYAKLPGGATSLFAPSE-GKTAEIVDLKVYARQG 270 +V+R FG ++ P G R+S E + E+YPATT ++A+P+ GD DVAALRPLLAQT+LE+A L L +DA + GW FH+ VD GA+LVVA T GGA+ GGYNP GW +G++R I+AFLFTW G + RPIK PKVGGA A + D PS + FG + + L +R A KLG YA+LP G SLFAP+E G+ + L+VY +G Sbjct: 49 LVERFVGKLFGRAALEDPTPGGLKRLSDEAAKELYPATTDEWAEPLAGDGPDVAALRPLLAQTQLERAPLRLAFDADRGGWSATAFHQAVDGYGAALVVAETEGGALIGGYNPRGWVSLGEDRDAIAAFLFTWRDGD-FSRRPIKLPKVGGAALAVVKDQPSSGIHFGPDGLSIPLAPGNERLAKCKLGPYYARLPDGGKSLFAPTESGRGTPLAGLRVYLAEG 271
BLAST of NO03G00590 vs. NCBI_GenBank
Match: CBN79182.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 200.3 bits (508), Expect = 7.700e-48 Identity = 107/219 (48.86%), Postives = 141/219 (64.38%), Query Frame = 0 Query: 53 VVDRLFSLFFGAKEAKPLG-FDRISVEKSPEVYPATTTKFADPVPGDSRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYAIDDNPSLALKFGYEDFLLKLT--TDRKAVSKLGLAYAKLPG--GATSLFAPSE-GKTAEIVDLKVY 266 V+++ FS+FFG K+ P G DRI+V+K P+ YPA A+PV GDS+D+A +RPLL QT LE KL L+YDA ++GWK FH+ VD +G LVV +T+GGAV GGYNP+GW G G+ R +SAFLFTW G R +K K+GGA A+ D P FG + F + + ++R SKLG Y +LP G S+FAP + G AE+VDLK Y Sbjct: 84 VIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDAKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGD-TNKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAY 301
BLAST of NO03G00590 vs. NCBI_GenBank
Match: CEM35929.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 192.2 bits (487), Expect = 2.100e-45 Identity = 101/223 (45.29%), Postives = 140/223 (62.78%), Query Frame = 0 Query: 54 VDRLFSLFFGAK---EAKPLGFDRISVEKSPEVYPATTTKFADPVPGD--SRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYAIDDNPSLALKFGYEDFLLKLTT-----DRKAVSKLGLAYAKLPGGATSLFAPSEGKTAEIVDLKVYA 267 V + FG+K + +PLGF R E PE Y ++AD +P D ++D+ +RPLL QTRLE+ + LIYDA++ GW FH++VD +G +V+ARTRGG++CGGYN GW GVG+ R SAFLFTWP G + RP+K PKVGGA AI D P + FG + F++ L++ + + SKLG Y++ G SLF+ E + AE+V+LKVYA Sbjct: 43 VTKAVKFVFGSKALQDPEPLGFKRSGKEAFPEYYGVNLAEWADLLPEDQGNKDLTLIRPLLKQTRLEQRPMQLIYDASRHGWSCRSFHQRVDRKGPCVVLARTRGGSICGGYNAAGWVGVGELRGAASAFLFTWPDGD-TSKRPLKLPKVGGAGVAICDFPDKGVSFGMDGFVVPLSSREPNGPQISYSKLGPYYSRRKDGFPSLFSGVEKRQAELVELKVYA 264
BLAST of NO03G00590 vs. NCBI_GenBank
Match: XP_005719256.1 (unnamed protein product [Chondrus crispus] >CDF39345.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 190.7 bits (483), Expect = 6.100e-45 Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = 0 Query: 53 VVDRLFSLFFGAKEAKPLGFDRISVEKSPEVYPATTTKFADPVPGDSRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARP-IKCPKVGGADYAIDDNPSLALKFGYEDFLLKL----------TTDRKAVSKLGLAYAKLPGGATSLFAPSEGKTAEIV-DLKVYA 267 +V+R+++ FGAK+A+P G R ++ PE+YPAT +FADPVP D+ ++A RPLLA+T+L+ ++ L+YDA +DGW FH ++ +GAS+V+A T GAV GGYNP+G+ G G+ R +AFLFTWP G ++P +K KVGGA A+ D P KFG + ++ L DR A SKLG Y + P G +LFA E E++ +LKV+A Sbjct: 66 IVERVYTAIFGAKQAEPFGLKRFDRDRFPELYPATLDEFADPVPADTPEMALFRPLLARTQLQTREIQLLYDANRDGWSADTFHEALNRKGASVVMAST-AGAVFGGYNPKGFVGYGESRGSKAAFLFTWPDGD--TSKPAVKLRKVGGAALAVVDEPETGPKFGADSLVVPLRPPRANWGESQKDRIAYSKLGSYYERRPDGGNTLFANGENPKGEVLQELKVFA 288
BLAST of NO03G00590 vs. NCBI_GenBank
Match: PSC73341.1 (ATPase AAA [Micractinium conductrix]) HSP 1 Score: 182.2 bits (461), Expect = 2.200e-42 Identity = 100/225 (44.44%), Postives = 137/225 (60.89%), Query Frame = 0 Query: 53 VVDRLFSLFFG---AKEAKPLGFDRISVEKSPEVYPATTTKFADPVPGDSRDVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYA-IDDNPSLALKFGYEDFLLKLT--TDRKAVSKLGLAYAKLPGGATSLFAPSE-GKTAEIVDLKVYARQGR 271 +V+RL FG ++ P G R+S + + E+YPA T +FA P+PGD DVAALRPLLAQT+LE A L + YDA +DGW FH VD+ GA+LVVA+T GGA+ GGYN GW + ++R ++FL+ W G ++ RP+K PKVGG A + D L FG + + L +R A KLG Y++LP G LFA E GK +++ L+ Y +GR Sbjct: 78 LVERLVGKLFGRQALEDPTPGGLKRLSDDAAKELYPAVTDQFAAPLPGDGDDVAALRPLLAQTQLESAPLRMAYDADEDGWTPDAFHAAVDSFGAALVVAQTEGGALVGGYNARGWVSLCEDRDSPASFLYAWRDGD-VSQRPLKLPKVGGPALAVVRDAAGQGLFFGPDGLHIPLAPGNERLAKCKLGPYYSRLPDGGKCLFAAGESGKGVQLMGLRAYVAEGR 301
BLAST of NO03G00590 vs. NCBI_GenBank
Match: XP_001698470.1 (predicted protein [Chlamydomonas reinhardtii] >PNW77669.1 hypothetical protein CHLRE_10g446500v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 181.4 bits (459), Expect = 3.700e-42 Identity = 99/225 (44.00%), Postives = 137/225 (60.89%), Query Frame = 0 Query: 54 VDRLFSLFF--GAKEAKPLGFDRISVEKSPEVYPATTTKFADPVPGDSR--DVAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYAIDDNPSLALKFGYEDFLLKLT---TDRKAVSKLGLAYAKLPGGATSLFAPSEG-KTAEIVDLKVYARQGR 271 ++++ S FF + P+G RI+ ++ P+ Y T A +PGD R DV+A+RPLLA+T+LE+ L L +DA DGW FH KVD +GA++V+A T GGAV GGYNPEGW G+G++R AFLF+WP G R K KVGG + A+ DNPS +FG + + L +R A KLG YA+LP G+ +LF+ + K AE+V LKVY + Sbjct: 55 IEKMVSFFFPKALSDPAPMGLKRINFDELPDQYCEMDT-LAPLLPGDERSPDVSAIRPLLARTQLERRSLKLAFDADLDGWSPAAFHAKVDGQGAAVVLATTAGGAVLGGYNPEGWIGLGEDRASNGAFLFSWPDGN-TKQRAYKIAKVGGPNLAVIDNPSSGPQFGADGLTIPLKPRGQERLAKCKLGTYYARLPDGSRTLFSGGDDPKKAELVSLKVYVADAK 277
BLAST of NO03G00590 vs. NCBI_GenBank
Match: XP_002949007.1 (hypothetical protein VOLCADRAFT_89457 [Volvox carteri f. nagariensis] >EFJ49942.1 hypothetical protein VOLCADRAFT_89457 [Volvox carteri f. nagariensis]) HSP 1 Score: 176.8 bits (447), Expect = 9.100e-41 Identity = 92/207 (44.44%), Postives = 126/207 (60.87%), Query Frame = 0 Query: 69 PLGFDRISVEKSPEVYPATTTKFADPVPGDSRD--VAALRPLLAQTRLEKAKLNLIYDAAKDGWKKGDFHRKVDNRGASLVVARTRGGAVCGGYNPEGWEGVGDERQCISAFLFTWPQGKMLAARPIKCPKVGGADYAIDDNPSLALKFGYEDFLLKLT---TDRKAVSKLGLAYAKLPGGATSLFAPSEGKTAEIVDLKVYARQGR 271 P+G RI+ E+ P+ + + A PVPGD RD + A+RPLLA+T+L++ L YDA GW FH +VD GA++VVA T GAV GGYNPEGW G+G++R AFLFTWP+G + K KVGG + A+ DNP+ +FG + + L +R SKLG Y++LP G SLF ++ + AE+V LKVY + R Sbjct: 14 PMGLKRINFEELPDQF-CEMNERASPVPGDERDPLIMAVRPLLARTQLQERPLKCAYDADVHGWSPTAFHAQVDGLGAAVVVAATSSGAVLGGYNPEGWIGLGEDRSSNGAFLFTWPEGDIKNTTAFKLAKVGGPNLAVIDNPNSGPQFGADGLSIPLRPRGQERVVKSKLGPYYSRLPDGGRSLFNKADSRKAELVWLKVYVAEAR 219 The following BLAST results are available for this feature:
BLAST of NO03G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00590 ID=NO03G00590|Name=NO03G00590|organism=Nannochloropsis oceanica|type=gene|length=2036bpback to top protein sequence of NO03G00590.1 >NO03G00590.1-protein ID=NO03G00590.1-protein|Name=NO03G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=271bpback to top Synonyms
Publications
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