NO03G00180, NO03G00180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00180 vs. NCBI_GenBank
Match: EWM29997.1 (major intrinsic protein [Nannochloropsis gaditana]) HSP 1 Score: 239.2 bits (609), Expect = 3.600e-59 Identity = 142/268 (52.99%), Postives = 189/268 (70.52%), Query Frame = 0 Query: 9 EAKQPLLSAQTDQRGAIDDQSGEAGTVDAQALQDKQQPPA--------NQHSEEANLEEQQAESRPRHDR-LAQIKQYCAHAFSILQELLAIPIMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATIAAAAAVGAVMNPAISTGLYVAGMSEE 268 E+KQPL+ AQ D + +++QA+ +++ A H E + +++ +E +H R L Q C+ F+ILQ LLA+P+ EALGTLTLTLVVGL++RPAA LTAA+ +AAVLLAMI+ GA ISGAHYNPAVTFAL+L+G SPF+ LVY+ SQ GAIGGA+LA+ LA+ D LADPFL G+ G+LALVEIS+T+ALV V++HT AR QQPN+++G AICAT+ A++GAVMNPA+S GLYVA ++ Sbjct: 31 ESKQPLMPAQ--------DNKVKDNVIESQAMSEEETASAGHSNAERNKSHLSEEHGDKKVSEGHRKHRRYLTAGAQCCSQTFTILQNLLAVPMTEALGTLTLTLVVGLLSRPAAGVDSLTAAIGVAAVLLAMINTGAPISGAHYNPAVTFALLLIGRVSPFRALVYIASQTVGAIGGAYLARGLAASDQLADPFLPEGVTGELALVEISFTYALVMVVIHTAFARAQQPNAYAGVAICATLVTGASLGAVMNPAVSAGLYVAARHKD 290
BLAST of NO03G00180 vs. NCBI_GenBank
Match: XP_005854294.1 (major intrinsic protein, partial [Nannochloropsis gaditana CCMP526] >EKU22065.1 major intrinsic protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 231.5 bits (589), Expect = 7.500e-57 Identity = 138/259 (53.28%), Postives = 183/259 (70.66%), Query Frame = 0 Query: 9 EAKQPLLSAQTDQRGAIDDQSGEAGTVDAQALQDKQQPPA--------NQHSEEANLEEQQAESRPRHDR-LAQIKQYCAHAFSILQELLAIPIMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATIAAAAAVGAVMNPAISTG 259 E+KQPL+ AQ D + +++QA+ +++ A H E + +++ +E +H R L Q C+ F+ILQ LLA+P+ EALGTLTLTLVVGL++RPAA LTAA+ +AAVLLAMI+ GA ISGAHYNPAVTFAL+L+G SPF+ LVY+ SQ GAIGGA+LA+ LA+ D LADPFL G+ G+LALVEIS+T+ALV V++HT AR QQPN+++G AICAT+ A++GAVMNPA+S G Sbjct: 26 ESKQPLMPAQ--------DNKVKDNVIESQAMSEEETASAGHSNAERNKSHLSEEHGDKKVSEGHRKHRRYLTAGAQCCSQTFTILQNLLAVPMTEALGTLTLTLVVGLLSRPAAGVDSLTAAIGVAAVLLAMINTGAPISGAHYNPAVTFALLLIGRVSPFRALVYIASQTVGAIGGAYLARGLAASDQLADPFLPEGVTGELALVEISFTYALVMVVIHTAFARAQQPNAYAGVAICATLVTGASLGAVMNPAVSAG 276
BLAST of NO03G00180 vs. NCBI_GenBank
Match: EWM27571.1 (major intrinsic protein [Nannochloropsis gaditana]) HSP 1 Score: 119.4 bits (298), Expect = 4.100e-23 Identity = 84/208 (40.38%), Postives = 119/208 (57.21%), Query Frame = 0 Query: 93 IMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATIAAAAAVGAVMNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTN 301 IME LGT +T+ GL+ + A +P AL +AAVL+ +IHAGAR+SGA+YNP+++ AL+LLG P Q L Y+ QL GA+ G L K L P DP G I + E ++FAL+ L T ++++Q NSF G+AI + A GA MNPA++ GL+ G G ++GL R +LP++ A F LT+ Sbjct: 70 IMETLGTTIITVTAGLLGK--ADMSPGLKALGVAAVLMPLIHAGARVSGANYNPSISVALLLLGKMPPAQCLFYISCQLVGALIGGVLTKVLL-PQGAMDPSSVGTI--ATCVPEALFSFALILTALQTTVSKSQSRNSFFGSAISIVVFLGVAFGAGMNPAVAGGLF---------AGAGHQKGLLARTILPLIMTFPAAFFFRLTD 263
BLAST of NO03G00180 vs. NCBI_GenBank
Match: WP_069871961.1 (porin [Streptomyces sp. SPMA113]) HSP 1 Score: 105.5 bits (262), Expect = 6.200e-19 Identity = 79/214 (36.92%), Postives = 111/214 (51.87%), Query Frame = 0 Query: 93 IMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATI-AAAAAVGAV----MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTNP 302 + E +GTL L L + A AP LAI VL+ M++AG +SGAHYNPAVT A++L G + YV +Q G GA +A+ + PD + L G G LVE+ +TFAL +V+L+ + + NSF G AI T+ A A AVG + NPA++ G +AG+ LWI L +VG+++A F NP Sbjct: 5 VAEFIGTLFLVLTIAAAVLTKAPLAP----LAIGGVLMVMVYAGGHVSGAHYNPAVTLAVLLRGRITAADAATYVVAQFVGGAVGALIARWVVDPDKVTALSLSGRQLGAALLVEVLFTFALAYVVLNVATSSSHPDNSFYGLAIGFTVLAGAIAVGGISGGAFNPAVAVGGSIAGLF--------SWSSLWIYLLSQVVGSVLAAVAFLALNP 206
BLAST of NO03G00180 vs. NCBI_GenBank
Match: WP_099016663.1 (porin [Streptomyces malaysiensis] >ATL88591.1 glycerol uptake facilitator or related permease (major intrinsic protein family) [Streptomyces malaysiensis]) HSP 1 Score: 105.5 bits (262), Expect = 6.200e-19 Identity = 79/214 (36.92%), Postives = 111/214 (51.87%), Query Frame = 0 Query: 93 IMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATI-AAAAAVGAV----MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTNP 302 + E +GTL L L + A AP LAI VL+ M++AG +SGAHYNPAVT A++L G + YV +Q G GA +A+ + PD + L G G LVE+ +TFAL +V+L+ + + NSF G AI T+ A A AVG + NPA++ G +AG+ LWI L +VG+++A F NP Sbjct: 5 VAEFIGTLFLVLTIAAAVLTKAPLAP----LAIGGVLMVMVYAGGHVSGAHYNPAVTLAVLLRGRITATDAATYVVAQFVGGAVGALIARWVVDPDKVTALSLSGRQLGAALLVEVLFTFALAYVVLNVATSSSHPDNSFYGLAIGFTVLAGAIAVGGISGGAFNPAVAVGGSIAGLF--------SWSSLWIYLLSQVVGSVLAAVAFLALNP 206
BLAST of NO03G00180 vs. NCBI_GenBank
Match: WP_100804652.1 (porin [Streptomyces sp. M56] >AUA08211.1 Aquaporin Z [Streptomyces sp. M56]) HSP 1 Score: 105.5 bits (262), Expect = 6.200e-19 Identity = 79/214 (36.92%), Postives = 111/214 (51.87%), Query Frame = 0 Query: 93 IMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATI-AAAAAVGAV----MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTNP 302 + E +GTL L L + A AP LAI VL+ M++AG +SGAHYNPAVT A++L G + YV +Q G GA +A+ + PD + L G G LVE+ +TFAL +V+L+ + + NSF G AI T+ A A AVG + NPA++ G +AG+ LWI L +VG+++A F NP Sbjct: 5 VAEFIGTLFLVLTIAAAVLTKAPLAP----LAIGGVLMVMVYAGGHVSGAHYNPAVTLAVLLRGRITATDAATYVVAQFVGGAVGALIARWVVDPDKVTALSLSGRQLGAALLVEVLFTFALAYVVLNVATSSSHPDNSFYGLAIGFTVLAGAIAVGGISGGAFNPAVAVGGSIAGLF--------SWSSLWIYLLSQVVGSVLAAVAFLALNP 206
BLAST of NO03G00180 vs. NCBI_GenBank
Match: WP_093700374.1 (porin [Streptomyces sp. MnatMP-M27] >SCF68560.1 aquaporin Z [Streptomyces sp. MnatMP-M27]) HSP 1 Score: 105.1 bits (261), Expect = 8.100e-19 Identity = 79/214 (36.92%), Postives = 111/214 (51.87%), Query Frame = 0 Query: 93 IMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATI-AAAAAVGAV----MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTNP 302 + E +GTL L L + A AP LAI VL+ M++AG +SGAHYNPAVT A++L G + YV +Q G GA +A+ + PD + L G G LVE+ +TFAL +V+L+ + + NSF G AI T+ A A AVG + NPA++ G +AG+ LWI L +VG+++A F NP Sbjct: 5 VAEFIGTLFLVLTIAAAVLTKAPLAP----LAIGGVLMVMVYAGGHVSGAHYNPAVTLAVLLRGRITATDAATYVVAQFVGGAVGALIARWVVDPDKVTALSLAGRQLGAALLVEVLFTFALAYVVLNVATSSSHPDNSFYGLAIGFTVLAGAIAVGGISGGAFNPAVAVGGSIAGLF--------SWSSLWIYLLSQVVGSVLAAVAFLALNP 206
BLAST of NO03G00180 vs. NCBI_GenBank
Match: WP_014057588.1 (major intrinsic protein [Streptomyces violaceusniger] >AEM84090.1 major intrinsic protein [Streptomyces violaceusniger Tu 4113]) HSP 1 Score: 104.8 bits (260), Expect = 1.100e-18 Identity = 83/214 (38.79%), Postives = 112/214 (52.34%), Query Frame = 0 Query: 93 IMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATI-AAAAAVGAV----MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTNP 302 ++E +GTL L L V T A PL A LAI VL+ M++AG +SGAHYNPAVT A+++ G + + Y +QL GA GA LA+ P+ + L G G LVE +TFAL +V+L+ + + NSF G AI T+ A A AVG + NPA++ G VAG+ LWI L VG ++A F NP Sbjct: 5 VVEFIGTLFLMLTV---TAAVLAKDPL-APLAIGGVLMVMVYAGGHVSGAHYNPAVTLAVLVRGRITAVEAAQYAAAQLVGATAGALLARWAVDPEKVTAVSLSGRQLGAALLVETLFTFALAYVVLNVATSSSHPDNSFYGLAIGFTVLAGAIAVGGISGGAFNPAVAVGGSVAGLF--------SWSSLWIYLLSQTVGGVLAALAFLALNP 206
BLAST of NO03G00180 vs. NCBI_GenBank
Match: WP_102935816.1 (porin [Streptomyces malaysiensis]) HSP 1 Score: 100.1 bits (248), Expect = 2.600e-17 Identity = 78/214 (36.45%), Postives = 110/214 (51.40%), Query Frame = 0 Query: 93 IMEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATI-AAAAAVGAV----MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTNP 302 + E +GTL L L + A AP LAI VL+ M++AG +SGAHYNPAVT A++L G + YV +Q G GA +A+ + PD + L G G LVE+ +TFAL +V+L+ + + NSF G AI T+ A A AVG + NPA++ G +AG+ L I L +VG+++A F NP Sbjct: 5 VAEFIGTLFLVLTIAAAVLTKAPLAP----LAIGGVLMVMVYAGGHVSGAHYNPAVTLAVLLRGRITAADAATYVVAQFVGGAVGALIARWVVDPDKVTALSLSGRQLGAALLVEVLFTFALAYVVLNVATSSSHPDNSFYGLAIGFTVLAGAIAVGGISGGAFNPAVAVGGSIAGLF--------SWSSLRIYLLSQVVGSVLAAVAFLALNP 206
BLAST of NO03G00180 vs. NCBI_GenBank
Match: WP_081854622.1 (porin [Solirubrobacterales bacterium URHD0059]) HSP 1 Score: 98.2 bits (243), Expect = 9.900e-17 Identity = 80/213 (37.56%), Postives = 113/213 (53.05%), Query Frame = 0 Query: 94 MEALGTLTLTLVVGLITRPAAATAPLTAALAIAAVLLAMIHAGARISGAHYNPAVTFALVLLGCTSPFQFLVYVGSQLAGAIGGAHLAKALASPDPLADPFLQGGINGKLALVEISYTFALVFVILHTVLARTQQPNSFSGAAICATIAAAA-AVGAV----MNPAISTGLYVAGMSEERAGGKGGEEGLWIRWLLPMVGALVATCLFYLTNP 302 +E +GT L VG+ A ATA A +AI A+L+ M+ AG +SG HYNPAV+ A++L G + +L YV +Q+A A L + L A P G NGK+ +VE+ +TFAL FV+L+ A+ + NSF G AI T+AA A A+G+V +NPA++ G V G LWI + G +A F +T P Sbjct: 10 VELIGTFFLMFTVGM----ATATAGRLAPVAIGAILMVMVFAGGHVSGGHYNPAVSTAVLLRGKLARRDYLPYVATQVAAAALAGLLVRGLGYAP--AAPIAVAG-NGKVLVVELLFTFALAFVVLNVATAQDTENNSFYGLAIGFTLAAGAFAIGSVSGGALNPAVALGASVLGTF--------AWSTLWIYLVAGFGGGAIAAAAFLVTQP 207 The following BLAST results are available for this feature:
BLAST of NO03G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00180 ID=NO03G00180|Name=NO03G00180|organism=Nannochloropsis oceanica|type=gene|length=1950bpback to top protein sequence of NO03G00180.1 >NO03G00180.1-protein ID=NO03G00180.1-protein|Name=NO03G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=650bpback to top Synonyms
Publications
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