NO03G00050, NO03G00050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00050 vs. NCBI_GenBank
Match: CBJ32671.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 275.0 bits (702), Expect = 4.400e-70 Identity = 127/203 (62.56%), Postives = 157/203 (77.34%), Query Frame = 0 Query: 204 QITKPHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALIGDEPLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTRKE 407 ++ KP RII+VRHGES GN DE YV PDWK+PL+ G + ++ G ++K IGD+PL+IYTSPY RTKQTL+ M+E+ + N VG+REEPR+TEQQFGNFQ + +K +R+ FGRFY+RFP GESGLDVY R TSFI+TMFRDFA+ I R DLN+IIVTHGLTLRLL+MRWF+ ++ FE T NP NGS VVM RKE Sbjct: 114 RVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKE 316
BLAST of NO03G00050 vs. NCBI_GenBank
Match: EWM29976.1 (phosphoglycerate mutase family protein [Nannochloropsis gaditana]) HSP 1 Score: 275.0 bits (702), Expect = 4.400e-70 Identity = 137/167 (82.04%), Postives = 149/167 (89.22%), Query Frame = 0 Query: 311 VQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTRKEGPAGGRSGGGVYEMAPESAALISLSCDSVPVGASLNTPCS-FDDSRGGVEEGECDRESARPLSASIQSLSI 477 +QQAKK+R NFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNI+IVTHGLTLRLLLMRWFKLTVETFESTTNPPNGS VVMTRKEGP GGRSGGGVYEMAPESAALISLSCDSVPVGAS+ TPCS F+D+ G ++ + PLS +++ LSI Sbjct: 1 MQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDSVPVGASIMTPCSNFEDNTGREQKNGGEERVMTPLSNAVERLSI 167
BLAST of NO03G00050 vs. NCBI_GenBank
Match: XP_005823921.1 (hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712] >EKX36941.1 hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712]) HSP 1 Score: 221.1 bits (562), Expect = 7.500e-54 Identity = 109/206 (52.91%), Postives = 144/206 (69.90%), Query Frame = 0 Query: 207 KPHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALIGDEPLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTRKEGPAGGR 413 +P RIILVRHGES GN E +Y Q PDWK+ L+P G QA + G ++K ++ +EP+Y+Y SPY+R QT ++++L+ G+REEPRI EQQFGN Q ++Q K +RS FGRF++RFPNGE+GLDVY RV+ FI T+ RD H+ + N+II+THGL LRL LMRWF+ +VE FE+T NPPN + VM R P GR Sbjct: 160 RPKRIILVRHGESEGNTQEILYTQIPDWKIALNPRGLRQAWDAGTKIKEIVKEEPVYVYHSPYQRAVQTCRQLIQALDYEQIQGLREEPRIAEQQFGNLQNLNTIRQNKHERSKFGRFFYRFPNGEAGLDVYIRVSGFIGTLRRD----HL-QEGSNVIIITHGLALRLFLMRWFQWSVEQFEATHNPPNCGIAVMERL--PEDGR 358
BLAST of NO03G00050 vs. NCBI_GenBank
Match: XP_002293928.1 (hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335] >EED88937.1 hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 215.7 bits (548), Expect = 3.100e-52 Identity = 108/201 (53.73%), Postives = 141/201 (70.15%), Query Frame = 0 Query: 208 PHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALIG--DEPLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRD----FADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVM 403 P RIIL+RHGES GN D+ YV T DW++P++ +G +QA+E G+QL+ I D + Y SPY RTKQTL ++L +DN + + EEPRI+EQQ GNFQ Q V AK +RS FGRF++RFP+GE+GLDVY+RV+SFI T+ RD +GH +LN++IVTHGL LRL LMRWF+ +V FE + NP N LV M Sbjct: 1 PKRIILIRHGESQGNVDQNAYVTTADWRIPITNLGKKQAQEAGKQLREKISEKDAKVVFYFSPYLRTKQTLDEILPYFDDNEILSVLEEPRISEQQIGNFQNVQQVLDAKAERSKFGRFFYRFPSGEAGLDVYSRVSSFIPTLVRDCDQYVREGHDL-DNLNLVIVTHGLALRLFLMRWFQFSVHDFEESQNPENCELVTM 200
BLAST of NO03G00050 vs. NCBI_GenBank
Match: XP_009037269.1 (hypothetical protein AURANDRAFT_13634, partial [Aureococcus anophagefferens] >EGB07892.1 hypothetical protein AURANDRAFT_13634, partial [Aureococcus anophagefferens]) HSP 1 Score: 209.1 bits (531), Expect = 2.900e-50 Identity = 102/203 (50.25%), Postives = 142/203 (69.95%), Query Frame = 0 Query: 208 PHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALI-GDE---PLYIYTSPYRRTKQTLSDMLES--LEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTR 405 P RIILVRHG+S GN DE VY TPDWKV L+ G +QA+ GR K ++ GD P++IY+SPY R ++T+ ++ + + ++ VG R+EPRI EQ FGNFQ Q +++ K R+ FGRF++RFPNGESG DVY RV++++ T++R+ G + PD +++VTHGLT RL+LMRW+ +VE FE T NP N L+VM R Sbjct: 1 PRRIILVRHGQSAGNVDETVYTHTPDWKVSLTDKGRDQAQAAGRSFKKILDGDAAAGPVFIYSSPYARCQETVEHLITAAGVPESRIVGRRQEPRIREQDFGNFQDPQKMRECKVSRNEFGRFFYRFPNGESGADVYDRVSTWLETLYREMEFG-LITPDTTLLLVTHGLTARLILMRWYHWSVEAFEETYNPGNAQLMVMER 202
BLAST of NO03G00050 vs. NCBI_GenBank
Match: XP_003057908.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH57859.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 207.2 bits (526), Expect = 1.100e-49 Identity = 107/214 (50.00%), Postives = 142/214 (66.36%), Query Frame = 0 Query: 202 PHQITKPHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALIG-DEPLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHI------CR-PDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTRKEG 408 P +P RIIL+RH ES GN DE VY + PD ++ L+ G +QAR+ G +LKA++G +E +Y Y SPY RT+QTL ++ +++ + +G+REEPR+ EQ FGNFQ + + K++R FGRF+FRFPNGES DVY RVTSF T+ D G CR D ++IVTHGLTLR+ LMRW+K +VE FE N NG LVVM R +G Sbjct: 16 PESWNRPKRIILIRHAESEGNVDETVYQRKPDHRIELTEKGKQQARDAGEKLKAILGPNESVYAYVSPYMRTEQTLYEIGQAIGTHRVLGVREEPRMREQDFGNFQDVGMA-ELKRERQRFGRFFFRFPNGESAADVYDRVTSFRETLRNDMHFGRFNCDVTGCRTEDCTVVIVTHGLTLRVFLMRWYKWSVEMFERCRNARNGELVVMERGKG 228
BLAST of NO03G00050 vs. NCBI_GenBank
Match: GAU20627.1 (hypothetical protein TSUD_230410 [Trifolium subterraneum]) HSP 1 Score: 204.9 bits (520), Expect = 5.500e-49 Identity = 116/245 (47.35%), Postives = 146/245 (59.59%), Query Frame = 0 Query: 176 HLPSLLQTHASSAFSLVTP---PIVPSPSPHQITKPHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALI---GDE--PLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRP-----DLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTRKEG 408 H+ SL + + F P P V S S +P RIILVRHGES GN DE VY + PD K+ L+ G QA E G+++K +I DE LY Y SPYRRT +TL + E + G REEPRI EQ FGNFQ +L++ K R+ +GRF++RFPNGES DVY R+T F T+ D G P D+N++IV+HGLTLR+ LMRW+K TVE FE TN NG +VM R G Sbjct: 48 HIDSLTNNNGHTRFPEKNPLINPFVASTSGVVPPRPRRIILVRHGESEGNVDESVYTRVPDPKIGLTKRGKVQAEECGQRIKNMIEKDSDENWQLYFYVSPYRRTLETLQSLARPFERSRIAGFREEPRIREQDFGNFQNRELMKVEKAQRNLYGRFFYRFPNGESAADVYDRITGFRETLRADINIGRYQPPGEKNFDVNLVIVSHGLTLRVFLMRWYKWTVEQFEGLTNFSNGGELVMERGYG 292
BLAST of NO03G00050 vs. NCBI_GenBank
Match: XP_002500018.1 (predicted protein [Micromonas commoda] >ACO61276.1 predicted protein [Micromonas commoda]) HSP 1 Score: 204.1 bits (518), Expect = 9.400e-49 Identity = 108/219 (49.32%), Postives = 139/219 (63.47%), Query Frame = 0 Query: 207 KPHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALIG-DEPLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTRKEGPAGGRSGGGVYEMAPES 425 +P RI+L+RH ES GN DE +Y + PD ++ L+ G EQAR+ G LK L+ DE +Y+Y SPY RT QTL ++ ++L G+REEPR+ EQ FGNFQ H + Q+ KK+R FGRF+FRFPNGES DVY RVTSF T+ D G + ++I+THGLTLR+ LMRW+K T + F+ NP N LVVM R E G Y M ES Sbjct: 52 RPKRIVLIRHAESEGNVDETMYQRKPDHRIELTERGKEQARQAGLALKELLDPDEQVYVYVSPYMRTMQTLYELGQTLGPERVSGVREEPRMREQDFGNFQDHTM-QELKKERHGFGRFFFRFPNGESASDVYDRVTSFRETLRNDMNFGRYTE-NCTVLIITHGLTLRVFLMRWYKWTCDMFDKLRNPGNAELVVMERGE--------RGRYSMLSES 260
BLAST of NO03G00050 vs. NCBI_GenBank
Match: XP_002291945.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED90796.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 203.8 bits (517), Expect = 1.200e-48 Identity = 106/213 (49.77%), Postives = 138/213 (64.79%), Query Frame = 0 Query: 210 RIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALI----------GDE---------PLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPN-GESGLDVYTRVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVM 403 RIIL+RHGES GN DER Y T DW++PL+ G EQAR G ++ + + GD+ +Y Y SPY RT+QTL ++L ++ + VGIRE+PRI EQQFGNFQ H +Q K RS+FGRF++RFP+ GESG DVY RV+ FI TM RD +D ++ I IVTHGL +RL LMR+F+ TV FE + NP NG +VV+ Sbjct: 2 RIILIRHGESLGNVDERAYSTTADWRIPLTNHGREQARLAGEKVSSHLSCLGSKLREKGDDNGDGSNHSGKVYFYVSPYLRTRQTLREILREVDKDRVVGIREDPRIAEQQFGNFQSHHSIQDNKAQRSDFGRFFYRFPDGGESGFDVYNRVSGFIGTMQRDASDA--LNDNMTICIVTHGLAMRLFLMRFFQYTVHEFERSYNPKNGRVVVL 212
BLAST of NO03G00050 vs. NCBI_GenBank
Match: XP_003078295.2 (Phosphoglycerate/bisphosphoglycerate mutase,active site [Ostreococcus tauri] >CEF97227.1 Phosphoglycerate/bisphosphoglycerate mutase,active site [Ostreococcus tauri] >OUS43987.1 histidine phosphatase superfamily [Ostreococcus tauri]) HSP 1 Score: 202.2 bits (513), Expect = 3.600e-48 Identity = 98/203 (48.28%), Postives = 132/203 (65.02%), Query Frame = 0 Query: 208 PHRIILVRHGESTGNADERVYVQTPDWKVPLSPVGHEQARETGRQLKALIG----DEPLYIYTSPYRRTKQTLSDMLESLEDNLKVGIREEPRITEQQFGNFQCHQLVQQAKKDRSNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIIIVTHGLTLRLLLMRWFKLTVETFESTTNPPNGSLVVMTRKE 407 P RI+LVRHGES GN DE Y +TPD +V L+ GH QA TGR+L+ ++ D L+ Y SPYRR+K+T + ++ + +G+REEP++ EQ FGNFQ ++ Q K++R FGRF++RFPNGESG DVY R+T F M RD G D N+I+ THGLTLRL LMRWF TV +E NP N +++ R++ Sbjct: 28 PRRIVLVRHGESFGNVDESEYTRTPDSQVRLTATGHNQAETTGRRLRDMMDETGEDYKLFFYLSPYRRSKETAIGIAKAFDGRRILGVREEPQLREQDFGNFQDYEAKQAEKRERHRFGRFFYRFPNGESGADVYDRITMFSDHMVRDIDAGRF-PEDTNMILCTHGLTLRLFLMRWFHWTVAEYERIANPSNSQPIILERRD 229 The following BLAST results are available for this feature:
BLAST of NO03G00050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00050 ID=NO03G00050|Name=NO03G00050|organism=Nannochloropsis oceanica|type=gene|length=2951bpback to top protein sequence of NO03G00050.1 >NO03G00050.1-protein ID=NO03G00050.1-protein|Name=NO03G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bpback to top Synonyms
Publications
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