NO29G00950, NO29G00950 (gene) Nannochloropsis oceanica

Overview
NameNO29G00950
Unique NameNO29G00950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2597
Alignment locationchr29:328947..331543 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:328947..331543 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007314DUF399
Homology
BLAST of NO29G00950 vs. NCBI_GenBank
Match: EWM21311.1 (protein of unknown function DUF399 [Nannochloropsis gaditana])

HSP 1 Score: 276.6 bits (706), Expect = 1.600e-70
Identity = 173/351 (49.29%), Postives = 204/351 (58.12%), Query Frame = 0
Query:  151 PSTPA-------PPSSSNFIMTRRNLLQTLRSASL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLWQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPK 494
            PS P+       PP S     TRR  LQ+LRSASL                                    +LWQVLMSDPPQLQPYT+EGEKAVL+ +AR+CNA+FLGEH    ++GG   G ++DQ LA R+VE L KYKP+DA L LGLE VQQKFQPALDAY+A   +       + A D  L+  TEWD R      +S  F + +PLLH AR + IKLL LGLESEA++KVR+VGLEGL EEERGRYV DP GFI SVK   FKLYAERFI+P F AR                                     LS AKFLAARILWDESM++AA+RHL+ +PK
Sbjct:  140 PSAPSGVSSHAQPPPS-----TRRRFLQSLRSASLSLVAFLSPAFLASSRPALALRAPSKLAPPPPPSVRPFLWQVLMSDPPQLQPYTSEGEKAVLRDMARTCNAVFLGEH---VEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTD------LAAADARLRQETEWDER------ASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAAR--------------AATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPK 456          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: CEM32425.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 139.8 bits (351), Expect = 2.300e-29
Identity = 99/279 (35.48%), Postives = 139/279 (49.82%), Query Frame = 0
Query:  216 WQVLMSDPPQLQPYTT-EGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPK 494
            +Q+L +DPP +QP T+  GE  +L+K+ R    + LGEH+           +  DQ LA R+V EL   +     L LGLEMVQ +FQPALD YI+   +       + A DE L+ +TEWD R P        F +Y+PL H+AR+ ++ L+A   +SEA  KV+  G EGL   ER RYV D  GF++      FK+YA+R I   F                                          P  F AAR+LWDE+MA+AA + L+++P+
Sbjct:   89 YQILPTDPPTMQPMTSGRGETNMLKKILRENELVLLGEHH----------DQGIDQELALRLVREL---RGLHYNLALGLEMVQLQFQPALDRYISREVAD------LAAADEDLRRSTEWDDRWP------FPFENYLPLFHWARQARVPLVAANTDSEAQLKVQLSGFEGLRGAERQRYVPDVLGFLNYTNQPGFKMYADRVIRRSFEYHNETGVLGPSP----------------------------DPNLFFAARVLWDETMANAATKWLEEHPR 314          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: XP_005832628.1 (hypothetical protein GUITHDRAFT_152654 [Guillardia theta CCMP2712] >EKX45648.1 hypothetical protein GUITHDRAFT_152654 [Guillardia theta CCMP2712])

HSP 1 Score: 112.5 bits (280), Expect = 3.900e-21
Identity = 91/274 (33.21%), Postives = 126/274 (45.99%), Query Frame = 0
Query:  229 YTTEGEKAV-------LQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPKVR 496
            +T  GE+ V       L+ L+R  NA+F GE +             KD+ LA RI++EL +   +  ++ +GLEMVQQ FQ  LD Y+ S   S  S       D  L   TEW+ R         +F +Y+P+L + +  KI LLAL +E+E  SKV++ GL  LS EER R ++DP GF+     K F  Y    + P F A                                           F+A RILWDE+MASAA + L +NP V+
Sbjct:  163 FTFRGEQMVKTNSEGALRYLSRR-NAVFFGESH----------DSFKDKKLATRILKELHE---RRGRVVVGLEMVQQPFQQVLDWYVFSAVPSKGS-------DSLLFEKTEWNDR------WGWNFKAYLPVLQYCQLHKIPLLALNVEAETTSKVQQQGLVSLSSEERRRLIIDPNGFVQESLSKTFPSYVRSVLKPSFDAHVNMGIYNNDAKTF---------------------------QNFVANRILWDETMASAAAKFLLKNPDVQ 382          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: CBJ27968.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 101.3 bits (251), Expect = 9.000e-18
Identity = 62/209 (29.67%), Postives = 110/209 (52.63%), Query Frame = 0
Query:  216 WQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIA-SPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGF 424
            +++  +DPP   P+  + E  +++++A     +F G H          G +  D  LAA ++ +L       A   +GLE V+ +FQPALD+Y+A            + + D  L  AT+W  R       +  F +++PL H AR + + ++ALG++SE +  V + G++ L E++R  YV D  GF++ V+ K F++YA++ I P +
Sbjct:  221 YRIEYTDPPTTVPFPRDTEPNLVKEIAGQ-GLVFFGVH----------GEDAPDPALAADVIGKLSASLKNQA--AIGLEQVEMQFQPALDSYVAGGDQGGDGKDEDLDSADAELARATQWAER------CAFPFENFLPLFHLARRRGLPMVALGVDSEKVFDVMQNGMDSLGEDDRNAYVSDFKGFVTYVRDKGFQVYADKLIFPSY 410          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: KOO23087.1 (iron-regulated protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 95.9 bits (237), Expect = 3.800e-16
Identity = 77/279 (27.60%), Postives = 114/279 (40.86%), Query Frame = 0
Query:  215 LWQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPK 494
            ++ V+      L P         + K  + C A+FLGEH+ +A           D +L + ++ EL K +     + +GLE VQ++FQPALD+++A               +  L+ ATEW  R          FA+Y P+    RE  I LLAL ++SE +S+V   GL  L  E    YV DP GF +      FK Y    + P +                                        +S   F + R+LWDESM SA+    + NP+
Sbjct:   67 IYSVVPDSTKTLSPTVKPLTAGTIVKQLQQCRAVFLGEHHNSA----------ADHLLQSAVIRELHKER-GSLPMAVGLEAVQRRFQPALDSFVAG-----------RIGEVELEEATEWRKR------WFWPFAAYAPVFRACRELGIPLLALNVDSEDLSRVEVGGLPALPPETLRSYVTDPEGFSAFAATTAFKEYVAYIVKPSY-------------------QMHQRMGILRTTITGQMLDEDMSFRNFFSGRVLWDESMGSASAAWCRNNPE 298          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: XP_009039927.1 (hypothetical protein AURANDRAFT_72253 [Aureococcus anophagefferens] >EGB05276.1 hypothetical protein AURANDRAFT_72253 [Aureococcus anophagefferens])

HSP 1 Score: 95.5 bits (236), Expect = 5.000e-16
Identity = 82/258 (31.78%), Postives = 107/258 (41.47%), Query Frame = 0
Query:  235 KAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNP 493
            + ++ +LAR   A+FLGEH+              D  L A++V  L+  +P    L +G E VQQ+FQPALDAY A   S           +  L  ATEW+ R       S  F +Y P+   A+  K  LLAL ++ E  +KV   GL GL    RGRY+ DP GF +  K   FK Y    I P +                                         S   FLA R+LWDE+MAS     L   P
Sbjct: 1124 RTLVAQLARR-RAVFLGEHH----------DAVADHALQAQLVAALRAAEP-SRPLAVGFEAVQQRFQPALDAYGAGKLS-----------ERRLAAATEWEQR------WSWPFEAYAPVFRAAKAAKADLLALNVDGEDAAKVSAAGLAGLDRAARGRYLPDPQGFAAFAKTVAFKSYVGYAIRPSYALH---------------VELGILPATTTSECVGNDASCTTSFKNFLANRVLWDEAMASVMETWLASKP 1337          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: CEL99640.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 88.6 bits (218), Expect = 6.100e-14
Identity = 76/280 (27.14%), Postives = 121/280 (43.21%), Query Frame = 0
Query:  216 WQVLMSDPPQLQPYTTEGEKAVLQKLA-RSCNAIFL-GEHYLTAKEGGKEGGEEKDQILAARIVEELQK-YKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNP 493
            W+   S P  + P + +     L++ + R  N I L GEH+   ++            L A++ EE QK    K   + +GLE VQ  FQP LD Y++   +           D  L   TEW  R       +  F +Y+P+   A+++ + L+AL   +E  S V   GLEGL ++ R +++ DP GF    +   FK+Y +  ++P +                                         +PA F AARI+ DE+MA+ AV+H++ NP
Sbjct:  126 WEQPSSLPVIVTPLSQDERTDALRRWSVRDGNTIVLMGEHHNAPED------HRLQAALIAQMEEERQKGSNGKLPPIAIGLEQVQVDFQPILDGYLSGKYT-----------DVDLYTKTEWATR------WAWPFDAYLPIFQLAKKRGLHLIALNPSTEDTSAVVSSGLEGLGQQARDKFIPDPLGFRDQTRRPGFKMYVDEVVLPSY----------------------------GYHANAGLLGDNPTPANFFAARIVRDEAMAAGAVQHVRDNP 354          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: GAX27862.1 (hypothetical protein FisN_13Hh027 [Fistulifera solaris])

HSP 1 Score: 83.6 bits (205), Expect = 1.900e-12
Identity = 69/248 (27.82%), Postives = 106/248 (42.74%), Query Frame = 0
Query:  244 SCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQN 492
            S  A++LGEH+  A          +D  L A +VE L  ++ +   L +GLE VQ +FQP LD ++A   S            E L+   EW+ R       + SF +Y P+   A+++ I L+AL + SE ++ V + GL GL ++    Y++D   F S  +G ++  Y +  I P F                                        +S   F + RILWD+SMAS A    + N
Sbjct:   87 SSGALWLGEHHNAA----------RDHNLQALLVESL--HQNRKGPLAIGLEQVQIQFQPILDDFVAGNLSL-----------EQLRQGVEWNTR------WNWSFDTYAPVFRLAQQRGIPLVALNVNSEDLALVEKEGLPGLPKDRLKEYIIDRPAFASFARGLQYSTYVDYVIRPSF-------------------ELHQSMGLLKHTMSGEKLDQEMSFRNFFSGRILWDQSMASRAYMWTRAN 286          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: GAX12575.1 (hypothetical protein FisN_13Lh027 [Fistulifera solaris])

HSP 1 Score: 83.2 bits (204), Expect = 2.500e-12
Identity = 69/248 (27.82%), Postives = 106/248 (42.74%), Query Frame = 0
Query:  244 SCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQN 492
            S  A++LGEH+  A          +D  L A +VE L  ++ +   L +GLE VQ +FQP LD ++A   S            E L+   EW+ R       + SF +Y P+   A+++ I L+AL + SE ++ V + GL GL ++    Y++D   F S  +G ++  Y +  I P F                                        +S   F + RILWD+SMAS A    + N
Sbjct:   90 SSGALWLGEHHNAA----------RDHNLQALLVESL--HQNRKGPLAIGLEQVQIQFQPILDEFVAGNLSL-----------EQLRQGVEWNTR------WNWSFDTYAPVFRLAQQRGIPLVALNVNSEDLALVEKDGLPGLPKDRLKEYIIDRPAFASFARGLQYATYVDYVIRPSF-------------------ELHQSMGLLKHTMSGEKLDQEMSFRNFFSGRILWDQSMASRAYMWTRAN 289          
BLAST of NO29G00950 vs. NCBI_GenBank
Match: XP_002293361.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89097.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 81.3 bits (199), Expect = 9.700e-12
Identity = 68/252 (26.98%), Postives = 101/252 (40.08%), Query Frame = 0
Query:  247 AIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDA-------KLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQN 492
            A++LGEH+              D  L A  V  +   + +         K+ +GLEMVQ +FQPALDAYIA   SS           + ++   +WD R       S SF  Y+P+    R+  + L+AL ++SE +  V   G   L  E+  +Y+ D  GF    + + FK Y +  I P +                                        +   +F + RILWDESMAS A +  + N
Sbjct:  174 AVWLGEHH----------NSVNDHNLQADFVRAIYNQRGESGGNSSSNNKMAVGLEMVQLQFQPALDAYIAKKISS-----------DEMRRQVQWDKR------WSWSFEGYLPVFETCRKLGVTLIALNVDSEDLGLVESGGFPALPREKMQKYISDTTGFAEFARNRYFKTYVDYVISPSY-------------------DLHKQMGILRTTITGQQLEDDMPFTRFFSGRILWDESMASNAFKWTEAN 379          
The following BLAST results are available for this feature:
BLAST of NO29G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21311.11.600e-7049.29protein of unknown function DUF399 [Nannochloropsi... [more]
CEM32425.12.300e-2935.48unnamed protein product [Vitrella brassicaformis C... [more]
XP_005832628.13.900e-2133.21hypothetical protein GUITHDRAFT_152654 [Guillardia... [more]
CBJ27968.19.000e-1829.67conserved unknown protein [Ectocarpus siliculosus][more]
KOO23087.13.800e-1627.60iron-regulated protein [Chrysochromulina sp. CCMP2... [more]
XP_009039927.15.000e-1631.78hypothetical protein AURANDRAFT_72253 [Aureococcus... [more]
CEL99640.16.100e-1427.14unnamed protein product [Vitrella brassicaformis C... [more]
GAX27862.11.900e-1227.82hypothetical protein FisN_13Hh027 [Fistulifera sol... [more]
GAX12575.12.500e-1227.82hypothetical protein FisN_13Lh027 [Fistulifera sol... [more]
XP_002293361.19.700e-1226.98predicted protein [Thalassiosira pseudonana CCMP13... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005215NSK005215Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00950.1NO29G00950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO29G00950.2NO29G00950.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601387gene_8267Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100233g2gene9111Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00950.1NO29G00950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO29G00950.2NO29G00950.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00950 ID=NO29G00950|Name=NO29G00950|organism=Nannochloropsis oceanica|type=gene|length=2597bp
AGCAATATGAAGAAAGCAAGCACGACCGCAGAGTCTACCCACCACCTTGG
AATATGGAATGGGCTCATTGCCCCAGCAAACCCGGGCACGCAAATCCACT
TCCACCATCACCATGACATCGACAATCTCGATCTTTTTTTCTATGTCACC
CAACACAGGCATGGTCCCGGCCACGCAGAAAGCCCAGCCGGGTAGATTAA
GAGACAGGTGGGTATCCGTGCTGTTGCTTGTAATGTTGCAGTTGTCCGCT
GTCGTAGTGTTGGCCCTGGGGGCCAGTGCCAGCCCCTCGTCAAAGACAAA
ACAAACGACGGCGGCCTTCCACCAGCCGCAGCTTCCTCCTTTGTGCTCGC
AGACGCACGCATGTGGCAGCCGGAGACGTCCTATCCCCCCCTCCTCCCTT
CGTGCCATCCCCTCCTCCTCGTTCCTGTCCTCCTGCTCTTCCTTCCCATC
CTTATTCAACGCCCACTGTTCCGACCCTGACATCACTGGCAAAACCAAGG
GCACTCATCCTTCAACTCCTGCTCCTCCTTCGTCTTCCAATTTCATCATG
ACCCGACGAAATCTCCTTCAAACCCTCCGTTCCGCGTCCCTCTCTCTCAC
CTCCCTCCTCTCCCTCACAACCTCGTCCCCCTCTTCAGCCAATGCCCTCC
GCGCCCCGAGCCCAATAACCCCTCCTCCCCCCCCTTCCCCACGTCCCTAC
TTATGGCAAGTCCTCATGTCGGATCCTCCGCAACTACAACCCTACACGAC
CGAGGGGGAGAAAGCCGTCTTGCAAAAATTAGCCCGGTCATGCAATGCCA
TATTTTTGGGGGAGCACTACCTGACGGCCAAGGAGGGAGGAAAGGAAGGA
GGGGAGGAGAAGGATCAGATTTTGGCGGCAAGGATAGTGGAGGAGTTGCA
AAAGTATAAGCCAAAGgtaagcatcaaggagagggagggagggagggagg
gaaggagggaaggagggaaggagggcgggctggaggaaggagtttctttc
gtacaaacaagtgcttaagtatgtacaaagttagatttttgcgagacctt
aaatgcacttatactcttcccttcttccccccttccctccctgcctctat
ctgttctttcctccctccctcccttcctccctcatagGACGCCAAGCTCA
CCTTGGGCCTCGAGATGGTCCAGCAGAAATTCCAGCCCGCCCTCGATGCC
TACATCGCCTCCCCCCCTTCCTCCCCCTCCTCCCCCTTGACAATGACTGC
TGAAGATGAAGCGTTGAAAGTGGCCACAGAATGGGATGCGCGCAACCCCT
CCTCCCTCCCTTCCTCGTCTTCGTTTGCCTCCTACATCCCCCTCCTTCAC
TTTGCGCGGGAGAAAAAGATTAAATTGCTCGCCTTGGGCCTCGAGAGCGA
GGCCATCTCTAAAGTAAGAGAAGTAGGGCTGGAGGGTTTGAGCGAGGAGG
AAAGGGGGAGGTACGTTCTAGACCCTGGCGGCTTCATCAGCTCGGTGAAG
GGGAAGGAGTTTAAATTGTATGCCGAGCGGTTCATAATTCCTGGATTTGT
TGCACGGGCTGCCAGTACTAGCAGTGCCGCGTTTGCTGCGGCTGCGACCA
GGGAAGGGGCTCCTGTTACTCCTCCTGCGGGTGGTGGAGGAAGGGGAGGA
GGAAGAAGAGAAGGGGGCTTGTCTCCGGCCAAGTTTCTTGCGGCAAGGAT
CTTGTGGGATGAGAGTATGGCATCAGCAGCTGTGAGACATTTGCAGCAAA
ATCCCAAGGTAAGACACATGCAATTGAATGCATAAAAAAACACACGTCTT
TTTTAAAAAAATATGTAAAAATTGTCCATATTTTTTCCCCTCTCTACTTT
CATACGGCCTTGTCTCCCTATTGTCGGGGCTGAGCACAACGAGATTGGCA
TGGGATCTCCTGTTGATTCAAAAACTTGCTTTATCTCGTCATCAGTATGA
TCACTTGATGATAAACATGTGTATATTCCCTAAACTAACTTATTGTTATG
ATTATTTGCTCAATTCATTGATTGGTGGACTCATTCATTTATTAATATAT
TTTTACAGGATCTTATTGTCCTCCTCGTGGGGGCCGAGCACATCAAATTC
GGCATGGGGGCTCCTGCCCGCCTAGAGCGCCTGCTGGCCTCAGCTCAAGT
ACCTACAGCAACAGGAAGAGGGCAAGTCAAAAGTATTTTACTTAATCCCA
GCCCGCAAGACTCGGGGAGCGAGACAAAACGACTGCGTTTGACATTGGTA
CGTATATCATTTTCGCATCTTTATAACTATTTGAGTAGATGCTCCATTGC
TTGATCTCTTCCATTCTTTTCTGGGGAATGACAGAGCGTCTCCAGCGGCC
CCTGACCATGATGCCCTCCCTCCCCTTCCTCCGTCCCTTCCTCCTCCCTC
TCCACAGGGCTATGCGAATAATTTGGAGAAGTGTCGCCCTCTGGCGGATT
ACTTGTGGTGGAGCGATTACCCCAAAGTGGCTTGGTTGGAGCACCCACAA
AACCCTATTTCGACTCCCTATTCGGGAGATGACACCTTGTTCCAGGTCTT
CAGTGGCGTGAAGTAAATGAAGAGGAAGAAGAAATATTGACCGAAGA
back to top

protein sequence of NO29G00950.1

>NO29G00950.1-protein ID=NO29G00950.1-protein|Name=NO29G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=609bp
MGSLPQQTRARKSTSTITMTSTISIFFSMSPNTGMVPATQKAQPGRLRDR
WVSVLLLVMLQLSAVVVLALGASASPSSKTKQTTAAFHQPQLPPLCSQTH
ACGSRRRPIPPSSLRAIPSSSFLSSCSSFPSLFNAHCSDPDITGKTKGTH
PSTPAPPSSSNFIMTRRNLLQTLRSASLSLTSLLSLTTSSPSSANALRAP
SPITPPPPPSPRPYLWQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFL
GEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQK
FQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFA
SYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPG
GFISSVKGKEFKLYAERFIIPGFVARAASTSSAAFAAAATREGAPVTPPA
GGGGRGGGRREGGLSPAKFLAARILWDESMASAAVRHLQQNPKDLIVLLV
GAEHIKFGMGAPARLERLLASAQVPTATGRGQVKSILLNPSPQDSGSETK
RLRLTLGYANNLEKCRPLADYLWWSDYPKVAWLEHPQNPISTPYSGDDTL
FQVFSGVK*
back to top

protein sequence of NO29G00950.2

>NO29G00950.2-protein ID=NO29G00950.2-protein|Name=NO29G00950.2|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp
MGSLPQQTRARKSTSTITMTSTISIFFSMSPNTGMVPATQKAQPGRLRDR
WVSVLLLVMLQLSAVVVLALGASASPSSKTKQTTAAFHQPQLPPLCSQTH
ACGSRRRPIPPSSLRAIPSSSFLSSCSSFPSLFNAHCSDPDITGKTKGTH
PSTPAPPSSSNFIMTRRNLLQTLRSASLSLTSLLSLTTSSPSSANALRAP
SPITPPPPPSPRPYLWQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFL
GEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQK
FQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFA
SYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPG
GFISSVKGKEFKLYAERFIIPGFVARAASTSSAAFAAAATREGAPVTPPA
GGGGRGGGRREGGLSPAKFLAARILWDESMASAAVRHLQQNPKVRHMQLN
A*
back to top
Synonyms
Publications