NO29G00820, NO29G00820 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00820 vs. NCBI_GenBank
Match: EWM21304.1 (DeoxyUTP pyrophosphatase, dUTPase subfamily [Nannochloropsis gaditana]) HSP 1 Score: 325.5 bits (833), Expect = 1.900e-85 Identity = 200/330 (60.61%), Postives = 220/330 (66.67%), Query Frame = 0
Query: 1 MLIGVTWSPVLST-VCRRATTA--FLASTSSSSASSFGVAPRP---NPRRLQQLFLPTLLFSLRSFSSPI-PIHQQHQYTRYLCAMSLSRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMAR-VEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPG----QKGAQLLVMLKEVAEAFPSEEAWAKSLKPLALVEDSRLYAAWSAYQVTKDLKDLKETLRLITPAEQ 319
M +G+ WS LST VC++A TA F +S S AS F V P RLQ LFLPTLLF++R FS P PI R LCAMSL R +E +QVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPA GKALVKTDLSIAIP NTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHG EDF V +GDRVAQLILE+I MA VE V G GAQLL+MLKEVA++ ++ W KSLKPLAL D+R+YAAW AYQ KD+ DLKETLRLITP+EQ
Sbjct: 1 MPVGIFWSSSLSTAVCKKAVTALSFRSSPSVPCASCFSVLAFPTAFRAPRLQHLFLPTLLFTIR-FSVPTNPIFPPS--FRSLCAMSLPRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGNGEGKRMRVVEGATSVPTGAQLLLMLKEVADS-GEDKDWIKSLKPLALAGDTRMYAAWGAYQCNKDMSDLKETLRLITPSEQ 326
BLAST of NO29G00820 vs. NCBI_GenBank
Match: CBJ28166.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Ectocarpus siliculosus]) HSP 1 Score: 194.5 bits (493), Expect = 5.000e-46 Identity = 97/120 (80.83%), Postives = 107/120 (89.17%), Query Frame = 0
Query: 86 EVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMARVE 206
E MQVK+LS++A++PVRGSE AAG+DLASA + VPAG +ALVKTDLSIAIP NTYARIAPRSGLA KK IDVGAGVVDYDYRGPVGVVLFNHG EDF V KGDRVAQLILE+ICMA +E
Sbjct: 38 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIE 157
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_002502323.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Micromonas commoda] >ACO63581.1 deoxyuridine 5'-triphosphate nucleotidohydrolase [Micromonas commoda]) HSP 1 Score: 181.8 bits (460), Expect = 3.300e-42 Identity = 89/119 (74.79%), Postives = 103/119 (86.55%), Query Frame = 0
Query: 86 EVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMARV 205
++++VK++S+HA LPVRGS+ AAGYDLASA D VVPA GK LVKTDLSIAIP++TYARIAPRSGLAWK ID GAGVVDYDYRG VGV+LFNHG++DF V KGDRVAQLILE+I V
Sbjct: 3 DLLRVKKISEHATLPVRGSDGAAGYDLASAYDYVVPARGKELVKTDLSIAIPKDTYARIAPRSGLAWKHFIDTGAGVVDYDYRGNVGVILFNHGEKDFEVKKGDRVAQLILERITTPEV 121
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_001422063.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABP00357.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 180.3 bits (456), Expect = 9.700e-42 Identity = 91/117 (77.78%), Postives = 97/117 (82.91%), Query Frame = 0
Query: 88 MQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMARV 205
++VKRLS A +P RGSE AAGYDLASA D VVPA GK LVKTDLSIAIP TYAR+APRSGLAWKK IDVGAGVVDYDYRG VGV+LFNHG EDF V KGDRVAQLILE+I V
Sbjct: 6 LRVKRLSDDATMPTRGSEGAAGYDLASAHDCVVPARGKELVKTDLSIAIPLGTYARVAPRSGLAWKKFIDVGAGVVDYDYRGNVGVILFNHGDEDFEVKKGDRVAQLILEQILTPEV 122
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_003084019.1 (DeoxyUTP pyrophosphatase [Ostreococcus tauri] >CAL57986.1 DeoxyUTP pyrophosphatase [Ostreococcus tauri]) HSP 1 Score: 178.3 bits (451), Expect = 3.700e-41 Identity = 86/112 (76.79%), Postives = 98/112 (87.50%), Query Frame = 0
Query: 88 MQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
++VK+LS+HA +PVRGS AAGYDL+SA D VVPA GK LVKTD+S+AIPE TYAR+APRSGLAWK IDVGAGVVDYDYRG VGV+LFNHG+ DF V KGDRVAQLILE+I
Sbjct: 5 LRVKKLSEHATVPVRGSSGAAGYDLSSAYDYVVPARGKELVKTDISVAIPEGTYARVAPRSGLAWKSFIDVGAGVVDYDYRGNVGVILFNHGENDFVVKKGDRVAQLILEQI 116
BLAST of NO29G00820 vs. NCBI_GenBank
Match: OUS45518.1 (hypothetical protein BE221DRAFT_146669 [Ostreococcus tauri]) HSP 1 Score: 178.3 bits (451), Expect = 3.700e-41 Identity = 86/112 (76.79%), Postives = 98/112 (87.50%), Query Frame = 0
Query: 88 MQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
++VK+LS+HA +PVRGS AAGYDL+SA D VVPA GK LVKTD+S+AIPE TYAR+APRSGLAWK IDVGAGVVDYDYRG VGV+LFNHG+ DF V KGDRVAQLILE+I
Sbjct: 5 LRVKKLSEHATVPVRGSSGAAGYDLSSAYDYVVPARGKELVKTDISVAIPEGTYARVAPRSGLAWKSFIDVGAGVVDYDYRGNVGVILFNHGENDFVVKKGDRVAQLILEQI 116
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_003064085.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH51707.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 175.3 bits (443), Expect = 3.100e-40 Identity = 85/119 (71.43%), Postives = 100/119 (84.03%), Query Frame = 0
Query: 81 LSRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
+ R + ++VK++S+HA LP RGS+ AAGYDLASA D V+PA GK LVKTDLSIAIP++TYARIAPRSGLAWK ID GAGVVDYDYRG VGV+LFNH +DF V KGDRVAQ+ILE+I
Sbjct: 24 MPRLEDQLRVKKISEHATLPARGSDGAAGYDLASAYDYVIPARGKELVKTDLSIAIPKDTYARIAPRSGLAWKHFIDTGAGVVDYDYRGNVGVILFNHSDKDFEVKKGDRVAQMILERI 142
BLAST of NO29G00820 vs. NCBI_GenBank
Match: ETI47697.1 (hypothetical protein F443_08130 [Phytophthora parasitica P1569]) HSP 1 Score: 174.5 bits (441), Expect = 5.300e-40 Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query: 82 SRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
SRP V++VK+++ A+LP RGS AAG DL++A D V+PAGGK LVKTDL IA+P+ YAR+APRSGLAWKK ID GAGVVD DYRG VGV+LFNH EDFPV +GDRVAQLILEKI
Sbjct: 25 SRPAPVLRVKKMTPEAILPTRGSSLAAGLDLSAAYDAVIPAGGKGLVKTDLIIAVPDGCYARVAPRSGLAWKKFIDTGAGVVDADYRGNVGVILFNHSNEDFPVKRGDRVAQLILEKI 142
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_008904878.1 (hypothetical protein PPTG_11335 [Phytophthora parasitica INRA-310] >ETN09732.1 hypothetical protein PPTG_11335 [Phytophthora parasitica INRA-310]) HSP 1 Score: 174.5 bits (441), Expect = 5.300e-40 Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query: 82 SRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
SRP V++VK+++ A+LP RGS AAG DL++A D VVPAGGK LVKTDL IA+P+ YAR+APRSGLAWKK ID GAGV+D DYRG VGV+LFNH EDFPV +GDRVAQLILEKI
Sbjct: 25 SRPAPVLRVKKMTPEAILPTRGSSLAAGLDLSAAYDAVVPAGGKGLVKTDLIIAVPDGCYARVAPRSGLAWKKFIDTGAGVIDADYRGNVGVILFNHSNEDFPVKRGDRVAQLILEKI 142
BLAST of NO29G00820 vs. NCBI_GenBank
Match: ETP45536.1 (hypothetical protein F442_08066 [Phytophthora parasitica P10297]) HSP 1 Score: 174.5 bits (441), Expect = 5.300e-40 Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query: 82 SRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
SRP V++VK+++ A+LP RGS AAG DL++A D VVPAGGK LVKTDL IA+P+ YAR+APRSGLAWKK ID GAGV+D DYRG VGV+LFNH EDFPV +GDRVAQLILEKI
Sbjct: 25 SRPAPVLRVKKMTPEAILPTRGSSLAAGLDLSAAYDAVVPAGGKGLVKTDLIIAVPDGCYARVAPRSGLAWKKFIDTGAGVIDADYRGNVGVILFNHSNEDFPVKRGDRVAQLILEKI 142 The following BLAST results are available for this feature:
BLAST of NO29G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00820 ID=NO29G00820|Name=NO29G00820|organism=Nannochloropsis oceanica|type=gene|length=2597bpback to top protein sequence of NO29G00820.1 >NO29G00820.1-protein ID=NO29G00820.1-protein|Name=NO29G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bpback to top Synonyms
Publications
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