NO29G00720, NO29G00720 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO29G00720
Unique Name	NO29G00720
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3878
Alignment location	chr29:270517..274394 +

Link to JBrowse

Properties


Property Name	Value
Description	RNA helicase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr29	genome	chr29:270517..274394 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0004386	helicase activity
GO:0016787	hydrolase activity
GO:0003677	DNA binding
GO:0005524	ATP binding
GO:0016787	hydrolase activity
GO:0003677	DNA binding
GO:0000166	nucleotide binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0009056	catabolic process
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR018999	RNA-helicase_UPF1_UPF2-interct
IPR006935	Helicase/UvrB_dom

Homology

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BLAST of NO29G00720 vs. NCBI_GenBank
Match: EWM21295.1 (RNA helicase [Nannochloropsis gaditana])

HSP 1 Score: 1322.8 bits (3422), Expect = 0.000e+0
Identity = 667/870 (76.67%), Postives = 724/870 (83.22%), Query Frame = 0

Query:    1 MSTKHPPGQQYDFLEFETEGLDDDEDALHSFGLSGGXXXXXXXXXXXXXXXXXXXDHYSGLSQDWGATPAGS---KALSAPPARXXXXXXXXXXXLEAVTGELEGLRLKEEDGGGNGLYHQHDDGVGTLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGE-VGVPEYACRYCGIHDPACVVRCVESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRMMDGEVALEMQDPRCPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGP 867
            M+T  P GQQYDFLEFET G D+++DA   FG  G                      + GL Q+W A  A S     L                 L  VT  ++ L L+ +    NG   + +DG G+L S                          XXXXXGE +  PEYACRYCGIHDPACVVRCVESNKWFCNSRWNTTGSHI+QHLVKARNKTV LHP+SPLGDTVLECYNCGCRN FLLGFIPAKSDSVVVLLCREPCL+ GALKD+DWDL QWMPLIEDRAFLPWLV+VPSEQEQLRARQI AGQI KLEE WKEN EATLE++ERQ  EGEEEGVAVLLKY+DGYHYQNVLAPLVKMEADYDKKMKEQQ+Q+GVSVTWD GLSKRKVA+F+F R E+++GLT+GDELRLKLD  T R+HGVNGG+ WEGVGNVLRM DGEV+LEM+   CPTEV +G+++EFVWKS SFDRMQGALKTFAVDD S+SGYLYHKLLGH+VEPQTLRV+ P++FSVP LPDLNHSQ QAVKSVLQKPLSLIQGPPGTGKTVTSAS+VYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRE VD+SVD+LCLHTMITTLATPE+EELSKL+QLKAELGELVPQDEAKFR+LK  +G+EVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQL+MVGDHCQLPPVITCKKAAKAGLTQSLFERLIILG RPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDER+ DRV FPWP P++PMFFWIQTGAEELSSSGTSYLNR EAS  ER+CT LLK GV AGKIGVITPYQGQRAHL+LHMARTGP
Sbjct:    1 MATHDPGGQQYDFLEFETPGYDEEDDAYTPFGRGGDGGTYEPGARKEGTGAAA----FLGLPQEWTAASAASLPRAPLGKQEQPRGSGKEEENGGLGHVTAGIKALHLQND--AHNGHDAEEEDGAGSLGS----------SSDEELGEDASHLQEHXXXXXGEGLDTPEYACRYCGIHDPACVVRCVESNKWFCNSRWNTTGSHIIQHLVKARNKTVALHPQSPLGDTVLECYNCGCRNVFLLGFIPAKSDSVVVLLCREPCLSNGALKDLDWDLAQWMPLIEDRAFLPWLVRVPSEQEQLRARQITAGQIQKLEEAWKENAEATLEEVERQGGEGEEEGVAVLLKYEDGYHYQNVLAPLVKMEADYDKKMKEQQSQDGVSVTWDEGLSKRKVASFRFGRGEEEAGLTVGDELRLKLDVLTARMHGVNGGQAWEGVGNVLRMADGEVSLEMRVSHCPTEVRDGFSVEFVWKSTSFDRMQGALKTFAVDDASISGYLYHKLLGHEVEPQTLRVSLPKRFSVPHLPDLNHSQFQAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSREGVDSSVDHLCLHTMITTLATPEQEELSKLRQLKAELGELVPQDEAKFRKLKTAVGREVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLIMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGHRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERSPDRVSFPWPTPTKPMFFWIQTGAEELSSSGTSYLNRSEASATERICTALLKVGVEAGKIGVITPYQGQRAHLILHMARTGP 854

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BLAST of NO29G00720 vs. NCBI_GenBank
Match: CBJ30064.1 (RNA helicase [Ectocarpus siliculosus])

HSP 1 Score: 1157.9 bits (2994), Expect = 0.000e+0
Identity = 562/841 (66.83%), Postives = 679/841 (80.74%), Query Frame = 0

Query:  161 EVGVPEYACRYCGIHDPACVVRCVESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQD-SGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRMMDGEVALEMQDPRCPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLK--NFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTD-RKLYVSQLSALQSASPVLPPW 998
            +V  PE+ACR+CGIHDPACVVRC            N +GSHI+QHLV++RN  VCLHP+SPLG+T+LECYNCG RN FL+GF+PAK+DSVVVLLCR        LKDM WDL +W+PL++DR FLPWLVKVPSEQ+Q RAR I++ QI KLEELW + PEATLEDLE+     ++E   VLLKY+DGYHYQN++APLVK+EADYDK  K+ Q Q+G+SV WD GL+K+ +A F+  + E+  + +T GDEL+L LD    R H    GKPWEG+G+VLR+ D EVAL M     PTE+T+GY ++FVWK+VS+DRMQ ALKTFAVDDTSVSGY+YH+LLGH+VEPQ LRV  P +FS PGLP+LNHSQ  AVK+VLQ+PLSLIQGPPGTGKTVTSA+LVYHLA+QG+GQVLV APSNVAVDHLT KI ATGL+VVRL AKSRE+V T VD+L LH M+  L TP+K++L KLQ LK ELGELV  DE +FR+L+    +E+L+AADVIC TCVGAGDPRL   N RFRQVLIDEATQAMEAECLIPIVMG KQLV+VGDHCQL PV+ CKK++KAGLTQSLFERL++LG+RP RLQVQYRMHPCLS +PSNMFYEGTLQNG+TE ER  D+V FPWPVPS+PMFF + TG EE+SSSGTSYLNR EA+ VE+  T  L+ GV   +IGV+TPY+GQR++LV H+ RTG LR +LY EIEVASVDSFQGREKD I+++CVRSN+HQGIGFL+DPRRLNVALTRA++G I++GN RILA+ PLW+AL++ YKD+ C+VEGPL N+QP+L+SFPPP  R  D R+LY + L+    A+     W
Sbjct:  147 DVEAPEWACRFCGIHDPACVVRCXXXXXXXXXXXXNASGSHIIQHLVRSRNNQVCLHPDSPLGETILECYNCGSRNLFLMGFVPAKADSVVVLLCRVCVEGAPGLKDMGWDLSEWLPLVQDRRFLPWLVKVPSEQQQSRARHISSAQIAKLEELWNKEPEATLEDLEKPGI--DDEAQPVLLKYEDGYHYQNIMAPLVKLEADYDKSSKDSQGQDGLSVRWDQGLNKKHIALFRLAQSEEHMARMTAGDELKLSLDPVGQRAH----GKPWEGLGHVLRIADSEVALMMLGGMVPTEITDGYQVDFVWKAVSYDRMQVALKTFAVDDTSVSGYIYHRLLGHEVEPQVLRVTLPPRFSAPGLPELNHSQFTAVKAVLQRPLSLIQGPPGTGKTVTSATLVYHLARQGMGQVLVCAPSNVAVDHLTAKISATGLRVVRLCAKSREAVSTDVDHLSLHVMVRALDTPDKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQVLIDEATQAMEAECLIPIVMGAKQLVLVGDHCQLGPVVLCKKSSKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERVMDQVDFPWPVPSKPMFFLMTTGVEEISSSGTSYLNRTEATAVEKCVTRFLQKGVTPDQIGVVTPYEGQRSYLVDHLQRTGSLRSSLYSEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIIIGNPRILAKNPLWNALVNFYKDHECLVEGPLDNMQPSLMSFPPPLNRRNDQRRLYFTALAQGTHAAANSQSW 981

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: PAN14040.1 (hypothetical protein PAHAL_B04007 [Panicum hallii] >PUZ72142.1 hypothetical protein GQ55_2G369400 [Panicum hallii var. hallii])

HSP 1 Score: 1133.6 bits (2931), Expect = 0.000e+0
Identity = 544/820 (66.34%), Postives = 676/820 (82.44%), Query Frame = 0

Query:  166 EYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLYV 982
            E+ACRYCGIH+PACV RC      KWFCNSR NT+GSHIV HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFI AKS++VVVLLCREPCL++ ALKDM+WDL QW PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK NP+A+LEDLE+   + E +  AV+LKY+D Y YQNV APL+K+EADYDK MKE Q+++ V+V WDIGL+K++VA F F +++ +  L  GDELRL+  G ++          W+ VG+V+++    EVALE++  +  PTE++ G++++FVWKS SFDRMQGA+KTFAVD+TSVSGY+YH LLGH+VE Q +R   PR+F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYH+A+QG GQVLV APSNVAVD L EKI +TGLKVVRL AKSRE+V + V++L LH  +  L T EK EL KLQQLK E GEL   DE K++ LKR   +E+L++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E ECLIP+V+G KQ+V+VGDHCQL PVI CKKAA+AGL QSLFERL+ILG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T +ER S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR EA+ VE++ TT L++GV   +IGVITPY+GQRA++V +M+R G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG+++LGN ++L++ PLW++L++HYK++ C+VEGPL NL+ +++ F  P+    DR+L++
Sbjct:  155 EHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQ--AVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSH-------PTWQSVGHVIKLTAQEEVALELRASQGVPTELSVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKSLKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 965

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: PAN14039.1 (hypothetical protein PAHAL_B04007 [Panicum hallii] >PUZ72141.1 hypothetical protein GQ55_2G369400 [Panicum hallii var. hallii])

HSP 1 Score: 1133.6 bits (2931), Expect = 0.000e+0
Identity = 544/820 (66.34%), Postives = 676/820 (82.44%), Query Frame = 0

Query:  166 EYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLYV 982
            E+ACRYCGIH+PACV RC      KWFCNSR NT+GSHIV HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFI AKS++VVVLLCREPCL++ ALKDM+WDL QW PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK NP+A+LEDLE+   + E +  AV+LKY+D Y YQNV APL+K+EADYDK MKE Q+++ V+V WDIGL+K++VA F F +++ +  L  GDELRL+  G ++          W+ VG+V+++    EVALE++  +  PTE++ G++++FVWKS SFDRMQGA+KTFAVD+TSVSGY+YH LLGH+VE Q +R   PR+F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYH+A+QG GQVLV APSNVAVD L EKI +TGLKVVRL AKSRE+V + V++L LH  +  L T EK EL KLQQLK E GEL   DE K++ LKR   +E+L++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E ECLIP+V+G KQ+V+VGDHCQL PVI CKKAA+AGL QSLFERL+ILG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T +ER S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR EA+ VE++ TT L++GV   +IGVITPY+GQRA++V +M+R G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG+++LGN ++L++ PLW++L++HYK++ C+VEGPL NL+ +++ F  P+    DR+L++
Sbjct:  155 EHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQ--AVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSH-------PTWQSVGHVIKLTAQEEVALELRASQGVPTELSVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKSLKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 965

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: PTQ42626.1 (hypothetical protein MARPO_0029s0126 [Marchantia polymorpha])

HSP 1 Score: 1132.1 bits (2927), Expect = 0.000e+0
Identity = 540/821 (65.77%), Postives = 673/821 (81.97%), Query Frame = 0

Query:  164 VPEYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLY 981
            +PE+AC+YCGIH+PAC+VRC      KWFCNSR NT+GSHIV HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFIPAKS+SVVVLLCREPCL++  LKDM+WDL  W+PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK +PEATLEDLE+     ++E + V LKY+D Y YQN+  PLVK+EADYDK MKE Q+++ ++V WDIGL+K++VA F F +++ +  L  GDELRL+  G +T          W+ VG+V+++    EVALE++  +  P +V   ++++FVWKS SFDRMQ A+KTFAVD+TSVSGY+YH+LLGH+VE QT+R   PR+F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYHLA+QG GQVLV APSNVAVD L EKI ATGLKVVRL AKSRE+V + V++L LH  +  L T +K EL KLQ LK E GEL   DE K++ LKR   +E+ ++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E EC IP+V+GCKQ+V+VGDHCQL PVI CKKAA+AGL+QSLFERL++LG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T ++R S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR E++ VE++ TT LK+GVN  +IGVITPY+GQRA++V HMAR G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG+++LGN ++L++ PLW++L++HYK++ C+VEG L NL+ +++ F  P+    DR++Y
Sbjct:  121 LPEHACKYCGIHNPACIVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFIPAKSESVVVLLCREPCLSVNGLKDMNWDLSSWLPLIDDRCFLEWLVKVPSEQEQLRARQISAQQINKVEELWKTSPEATLEDLEKPGV--DDEPLPVALKYEDAYQYQNIFGPLVKLEADYDKMMKESQSKDNITVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTH-------SAWQSVGHVIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTFAVDETSVSGYIYHRLLGHEVELQTVRNTLPRRFGAPGLPELNASQVYAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHLAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQLLKDEQGELSSADEKKYKALKRATEREIAQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECSIPLVLGCKQVVLVGDHCQLGPVIMCKKAARAGLSQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNNFYEGTLQNGVTMNQRLSQGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTESANVEKIVTTFLKSGVNPSQIGVITPYEGQRAYIVNHMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGALNNLKQSMVQFQKPKKIYNDRRVY 932

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: XP_002460731.1 (regulator of nonsense transcripts 1 homolog isoform X2 [Sorghum bicolor] >EER97252.1 hypothetical protein SORBI_3002G309600 [Sorghum bicolor])

HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 543/820 (66.22%), Postives = 675/820 (82.32%), Query Frame = 0

Query:  166 EYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLYV 982
            E+ACRYCGIH+PACV RC      KWFCNSR NT+GSHIV HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFI AKS++VVVLLCREPCL++ ALKDM+WDL QW PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK NP+A+LEDLE+   + E +  +V+LKY+D Y YQNV APL+K+EADYDK MKE Q+++ V+V WDIGL+K++VA F F +++ +  L  GDELRL+  G ++          W+ VG+V+++    EVALE++  +  PTE+  G++++FVWKS SFDRMQGA+KTFAVD+TSVSGY+YH LLGH+VE Q +R   PR+F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYH+A+QG GQVLV APSNVAVD L EKI +TGLKVVRL AKSRE+V + V++L LH  +  L T EK EL KLQQLK E GEL   DE K++ LKR   +E+L++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E ECLIP+V+G KQ+V+VGDHCQL PVI CKKAA+AGL QSLFERL+ILG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T +ER S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR EA+ VE++ TT L++GV   +IGVITPY+GQRA++V +M+R G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG+++LGN ++L++ PLW++L++HYK++ C+VEGPL NL+ +++ F  P+    DR+L++
Sbjct:  155 EHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQ--SVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSH-------PTWQSVGHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 965

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: XP_021308586.1 (regulator of nonsense transcripts 1 homolog isoform X4 [Sorghum bicolor] >EER99407.2 hypothetical protein SORBI_3002G309600 [Sorghum bicolor])

HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 543/820 (66.22%), Postives = 675/820 (82.32%), Query Frame = 0

Query:  166 EYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLYV 982
            E+ACRYCGIH+PACV RC      KWFCNSR NT+GSHIV HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFI AKS++VVVLLCREPCL++ ALKDM+WDL QW PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK NP+A+LEDLE+   + E +  +V+LKY+D Y YQNV APL+K+EADYDK MKE Q+++ V+V WDIGL+K++VA F F +++ +  L  GDELRL+  G ++          W+ VG+V+++    EVALE++  +  PTE+  G++++FVWKS SFDRMQGA+KTFAVD+TSVSGY+YH LLGH+VE Q +R   PR+F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYH+A+QG GQVLV APSNVAVD L EKI +TGLKVVRL AKSRE+V + V++L LH  +  L T EK EL KLQQLK E GEL   DE K++ LKR   +E+L++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E ECLIP+V+G KQ+V+VGDHCQL PVI CKKAA+AGL QSLFERL+ILG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T +ER S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR EA+ VE++ TT L++GV   +IGVITPY+GQRA++V +M+R G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG+++LGN ++L++ PLW++L++HYK++ C+VEGPL NL+ +++ F  P+    DR+L++
Sbjct:  155 EHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQ--SVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSH-------PTWQSVGHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 965

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: XP_021308583.1 (regulator of nonsense transcripts 1 homolog isoform X1 [Sorghum bicolor])

HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 543/820 (66.22%), Postives = 675/820 (82.32%), Query Frame = 0

Query:  166 EYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLYV 982
            E+ACRYCGIH+PACV RC      KWFCNSR NT+GSHIV HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFI AKS++VVVLLCREPCL++ ALKDM+WDL QW PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK NP+A+LEDLE+   + E +  +V+LKY+D Y YQNV APL+K+EADYDK MKE Q+++ V+V WDIGL+K++VA F F +++ +  L  GDELRL+  G ++          W+ VG+V+++    EVALE++  +  PTE+  G++++FVWKS SFDRMQGA+KTFAVD+TSVSGY+YH LLGH+VE Q +R   PR+F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYH+A+QG GQVLV APSNVAVD L EKI +TGLKVVRL AKSRE+V + V++L LH  +  L T EK EL KLQQLK E GEL   DE K++ LKR   +E+L++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E ECLIP+V+G KQ+V+VGDHCQL PVI CKKAA+AGL QSLFERL+ILG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T +ER S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR EA+ VE++ TT L++GV   +IGVITPY+GQRA++V +M+R G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG+++LGN ++L++ PLW++L++HYK++ C+VEGPL NL+ +++ F  P+    DR+L++
Sbjct:  155 EHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQ--SVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSH-------PTWQSVGHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 965

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: XP_021308585.1 (regulator of nonsense transcripts 1 homolog isoform X3 [Sorghum bicolor])

HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 543/820 (66.22%), Postives = 675/820 (82.32%), Query Frame = 0

Query:  166 EYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLYV 982
            E+ACRYCGIH+PACV RC      KWFCNSR NT+GSHIV HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFI AKS++VVVLLCREPCL++ ALKDM+WDL QW PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK NP+A+LEDLE+   + E +  +V+LKY+D Y YQNV APL+K+EADYDK MKE Q+++ V+V WDIGL+K++VA F F +++ +  L  GDELRL+  G ++          W+ VG+V+++    EVALE++  +  PTE+  G++++FVWKS SFDRMQGA+KTFAVD+TSVSGY+YH LLGH+VE Q +R   PR+F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYH+A+QG GQVLV APSNVAVD L EKI +TGLKVVRL AKSRE+V + V++L LH  +  L T EK EL KLQQLK E GEL   DE K++ LKR   +E+L++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E ECLIP+V+G KQ+V+VGDHCQL PVI CKKAA+AGL QSLFERL+ILG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T +ER S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR EA+ VE++ TT L++GV   +IGVITPY+GQRA++V +M+R G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG+++LGN ++L++ PLW++L++HYK++ C+VEGPL NL+ +++ F  P+    DR+L++
Sbjct:  155 EHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQ--SVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSH-------PTWQSVGHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 965

[Close]

BLAST of NO29G00720 vs. NCBI_GenBank
Match: XP_003563076.1 (regulator of nonsense transcripts 1 homolog [Brachypodium distachyon] >KQK16145.1 hypothetical protein BRADI_1g27027v3 [Brachypodium distachyon])

HSP 1 Score: 1131.3 bits (2925), Expect = 0.000e+0
Identity = 541/820 (65.98%), Postives = 674/820 (82.20%), Query Frame = 0

Query:  166 EYACRYCGIHDPACVVRC--VESNKWFCNSRWNTTGSHIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSVVVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRARQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHYQNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQDSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRM-MDGEVALEMQDPR-CPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGHDVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGKTVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKSRESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFRQLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAECLIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPHRLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPMFFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPYQGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSNDHQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNGCVVEGPLLNLQPTLLSFPPPRIRPTDRKLYV 982
            E+ACRYCGIH PACV RC      KWFCNSR NT+GSH+V HLV+A++K VCLH +SPLG+T+LECYNCGCRN FLLGFI AK+++VVVLLCREPCLN+ ALKDM+WDL QW+PLI+DR FL WLVKVPSEQEQLRARQI+A QINK+EELWK NP+A+LEDLE+   + E +   V+LKY+D Y YQNV APL+K+EADYDK MKE Q+++ V+V WDIGL+K++VA F F +++ +  L  GDELRL+  G T+          W+ VG+V+++    EVALE++  +  P E++ G++++FVWKS SFDRMQGA+KTFAVD+TSVSGY+YH LLGH+VE Q +R   P++F  PGLP+LN SQ+ AVKSVLQKP+SLIQGPPGTGKTVTSA++VYH+A+QG GQVLV APSNVAVD L EKI +TGLKVVRL AKSRE+V + V++L LH  +  L T EK E+ KLQQLK E GEL   DE K++ LKR   +E+L++ADVICCTCVGAGDPRL NFRFRQVLIDE+TQA E ECLIP+V+G KQ+V+VGDHCQL PVI CKKAA+AGL QSLFERL+ILG++P RLQVQYRMHPCLS FPSN FYEGTLQNG+T +ER S  + FPWPVP+RPMFF++Q G EE+S+SGTSYLNR EA+ VE++ TT L++GV   +IGVITPY+GQRA++V +M+R G LRQ LYKEIEVASVDSFQGREKDYII+SCVRSN+HQGIGFL DPRRLNVALTRA+YG++VLGN ++L++ PLW++L++HYK++ C+VEGPL NL+ +++ F  P+    DR+L++
Sbjct:  152 EHACRYCGIHSPACVARCNVPSCRKWFCNSRGNTSGSHLVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLNVNALKDMNWDLSQWLPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQ--PVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDSVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGGTSH-------PAWQSVGHVIKLTAQEEVALELRASQGVPVELSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPKRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEMHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGVEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 962

The following BLAST results are available for this feature:

BLAST of NO29G00720 vs. NCBI_GenBank

BLAST of NO29G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM21295.1	0.000e+0	76.67	RNA helicase [Nannochloropsis gaditana]	[more]
CBJ30064.1	0.000e+0	66.83	RNA helicase [Ectocarpus siliculosus]	[more]
PAN14040.1	0.000e+0	66.34	hypothetical protein PAHAL_B04007 [Panicum hallii]...	[more]
PAN14039.1	0.000e+0	66.34	hypothetical protein PAHAL_B04007 [Panicum hallii]...	[more]
PTQ42626.1	0.000e+0	65.77	hypothetical protein MARPO_0029s0126 [Marchantia p...	[more]
XP_002460731.1	0.000e+0	66.22	regulator of nonsense transcripts 1 homolog isofor...	[more]
XP_021308586.1	0.000e+0	66.22	regulator of nonsense transcripts 1 homolog isofor...	[more]
XP_021308583.1	0.000e+0	66.22	regulator of nonsense transcripts 1 homolog isofor...	[more]
XP_021308585.1	0.000e+0	66.22	regulator of nonsense transcripts 1 homolog isofor...	[more]
XP_003563076.1	0.000e+0	65.98	regulator of nonsense transcripts 1 homolog [Brach...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL061	nonsL061	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR038	ncniR038	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR081	ngnoR081	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005191	NSK005191	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO29G00720.1	NO29G00720.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|532346	gene_8246	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100837g1	gene9128	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO29G00720.1	NO29G00720.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO29G00720 ID=NO29G00720|Name=NO29G00720|organism=Nannochloropsis oceanica|type=gene|length=3878bp
ACAGGGATCTTATCAGCAGCATGTCGACGAAACATCCGCCTGGGCAGCAG
TATGACTTCCTGGAGTTTGAGACTGAAGGACTGGACGACGATGAGGATGC
CCTCCATAGTTTTGGCCTTAGCGGCGGCGGAGGCTGCGGCAGTGGCGGTG
GGCTACGCGGTAGAGGAGGAGGAAGAGGGACCGGCGATCACTACTCGGGG
CTGTCACAGGACTGGGGTGCCACACCGGCGGGGTCTAAGGCGCTGTCGGC
CCCGCCTGCAAGGAAGCAGCAGCAGCAGCAGCAAGGCCAAGGAGAATTGG
AGGCCGTGACGGGGGAATTGGAGGGGCTGCGGCTTAAGGAAGAAGACGGT
GGTGGCAACGGCCTGTATCACCAGCATGACGACGGCGTAGGGACCTTGGA
GAGTAGCGACGAGGAGAGGCAGGACGATAATCATTATGGTGAGGACACTT
ACTCGCAAAATGATGAGGGCGCCGGAGAGGAGGACGAGGAGGAGGAAGGG
GAGGTGGGTGTACCGGAGTATGCTTGTCGGTACTGTGGCATCCATGATCC
TGCATGTGTGGTCCGGTGCGTCGAGAGCAATAAGTGGTTTTGTAATTCCC
GGTGGAATACGACTGGGTCGCACATTGTGCAGCATCTGGTCAAGGCGAGG
AACAAGACTGTCTGCCTTCACCCTGAGAGTCCCCTAGGAGATACGGTCCT
CGAGTGCTACAATTGTGGGTGCCGGAACGCGTTCCTCCTGGGTTTTATCC
CCGCTAAGTCGGACTCCGTGGTAGTGTTGCTTTGCCGGGAGCCATGTTTA
AACATGGGGGCATTAAAGGACATGGACTGGGATCTTGGGCAATGGATGCC
CCTCATTGAAGATCGCGCATTTTTGCCGTGGCTTGTCAAGGTTCCTTCGG
AACAGGAGCAGCTGCGCGCGCGTCAGATCAATGCGGGACAAATTAACAAG
CTGGAGGAGTTGTGGAAGGAGAATCCAGAAGCGACCTTGGAAGACTTGGA
AAGGCAGAATGCCGAGGGGGAGGAGGAGGGGGTGGCTGTGTTGCTGAAGT
ATGACGACGGATACCATTATCAGAATGTGCTGGCACCCTTGGTGAAGATG
GAAGCGGACTACGATAAGAAGATGAAGGAGCAGCAGACCCAGGAGGGGGT
CAGCGTGACGTGGGACATAGGTTTGAGCAAACGTAAGGTTGCTACTTTCA
AATTTAGACGTGACGAGCAGGATTCGGGGTTGACAATCGGAGATGAGTTG
AGGCTGAAGCTTGATGGTTTTACCACGCGCTTGCACGGTGTGAATGGCGG
CAAACCCTGGGAAGGAGTGGGCAACGTGTTGAGAATGATGGATGGAGAGG
TGGCGCTGGAAATGCAGGACCCCAGGTGTCCGACGGAGGTAACCGAGGGG
TACGCCATTGAATTTGTCTGGAAATCGGTCAGCTTCGACAGGATGCAAGG
TGCGCTCAAAACGTTCGCTGTCGATGATACCTCAGTCTCGGGCTACCTGT
ACCATAAGCTATTGGGGCATGACGTGGAGCCTCAGACGCTGCGCGTGGCC
CCTCCGCGGAAATTTTCCGTGCCGGGGCTCCCGGACCTGAATCACTCGCA
GCTTCAAGCAGTTAAAAGCGTGTTGCAGAAGCCCTTATCGCTCATTCAAG
GTCCGCCGGGGACGGGGAAGACGGTGACCTCAGCGTCGCTTGTCTACCAT
TTGGCCCAGCAGGGGGTGGGGCAGGTGTTGGTGGTGGCGCCTTCGAACGT
GGCGGTGGACCACCTGACCGAAAAGATTCACGCAACGGGCTTGAAAGTCG
TGCGGTTGGCAGCCAAGTCGCGCGAGTCGGTGGATACCTCAGTCGATTAC
TTGTGTTTGCACACCATGATCACCACGTTGGCGACGCCGGAGAAGGAGGA
ACTGTCGAAACTGCAGCAGCTCAAGGCAGAGTTAGGAGAGCTGGTCCCGC
AGGATGAAGCGAAATTTAGACAGCTGAAGAGGAAATTGGGAAAGGAGGTC
TTGAAGGCTGCGGATGTAATTTGTTGCACGTGTGTTGGGGCGGGAGACCC
GCGGTTGAAGAACTTTCGGTTTCGACAGGTGTTGATCGATGAGGCGACGC
AAGCGATGGAGGCAGAATGTCTGATTCCGATTGTGATGGGATGTAAGCAG
TTGGTTATGGTTGGGGATCATTGTCAGTTGCCGCCTGTGATTACATGCAA
GAAGGCGGCAAAAGCGGGTTTAACTCAATCGTTGTTTGAGCGGCTAATCA
TTTTGGGGCTTCGTCCTCATCGGCTTCAAGTGCAGTATCGTATGCATCCC
TGTTTGTCCGCGTTTCCGTCAAACATGTTTTATGAAGgtgagtattcttt
ttctctcccaatctccgtccctgttttccatcctttcttccttatgaaat
tgtatgcgtgactgctttcttcactaatatcgagcctaggtttacaatgg
cctctatcctctcattttttaccgcggtggtattaaaatgtatcattgtt
tgacaccctttcctctcttttctcttctcccactcctcctgcagGCACTC
TTCAAAACGGCATCACCGAAGACGAGCGGGCCTCCGACCGCGTTCCTTTC
CCCTGGCCCGTCCCCAGTAGGCCCATGTTCTTTTGGATCCAAACGGGTGC
GGAAGAGCTTTCCTCCTCCGGCACCTCGTATTTGAACAGAGGGGAAGCCT
CGGGGGTGGAGCGTGTGTGTACCACGCTGTTGAAAGCCGGGGTGAACGCA
GGGAAGATTGGTGTGATTACACCGTACCAGGGACAGCGGGCGCACTTAGT
CTTGCACATGGCGCGCACGGGTCCCTTGCGGCAAGCGCTTTACAAGGAAA
TCGAAGTGGCCAGCGTCGATTCGTTCCAAGGCCGAGAGAAAGATTACATC
ATTGTGTCGTGCGTCCGATCGAACGACCACCAGGGTATCGGCTTTCTTGC
TGACCCCCGCCGACTGAACGTTGCGCTCACCCGTGCCAAATACGGGATGA
TTGTCCTCGGAAACGCGCGAATTTTGGCGCGAGTCCCCTTATGGCACGCC
CTCATCTCGCACTACAAAGACAATGGTTGTGTCGTCGAAGGGCCTTTGTT
GAACCTCCAGCCGACGTTGCTTTCCTTCCCTCCCCCTCGCATTCGACCGA
CAGACCGGAAATTGTACGTGTCTCAACTCTCGGCGCTGCAGTCTGCCAGC
CCAGTGCTCCCTCCGTGGGTGGCGCCCATGCAAGAGTATTTTATGAACCA
GAAGCAGCAGGGAGGGAGGGAGGGAGGGAGGTCACGAAGGAGGGATAGCG
GTGGGCAAGGAGGGGGGCAACAGCAGCAACAGCAGTACCCGCCAATGGAC
TCCCGCTTCGATCCTAGGTATGAGGCTGCCCAGGCGGCAGCGGCGGCGAT
GATAGTTGGGGAGGGAGGGAATGAGGGAGGGCGGGCGGGAGGGGAGGTGG
GGCATTTGGTGATGGGGAGTGCAGGTTTTGGATATGAGGCCAGTAGTCAG
GGGTCGATGTCGGTGGGAGGAGGCCGGGGGGGAGGCCGTGGGGGAGGAGG
GGGGTATGGAGGGCATTTTAATCTTGGCATGGGGTCGCAGAGTTTCAGTC
AAATGTCGGAGGGAGGGATGTCGATGTATGGTGTAGGAGGGGGGGGAAGA
GAAGAAGGAGGCGGGTTCAGCCAGGAGAGCTATGGGGGGTCGATGGGGGA
GGTAGGTGAAGGAAGAGAGGGGGGCGGGGGGGATTATCCTGGCTTCGATT
CGTCGGCCTTCAGGAGAAGTGGGCCTGTGCTGGGTGGAGGGGGAGTTAAG
GGGGGAGGGAGGGCGGGGGAGGTAAATACGCGGTTAACCATGAGTCAAGA
ACCGGAGTCGCAGGGATTGTTTTCGTAG

protein sequence of NO29G00720.1

>NO29G00720.1-protein ID=NO29G00720.1-protein|Name=NO29G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1217bp
MSTKHPPGQQYDFLEFETEGLDDDEDALHSFGLSGGGGCGSGGGLRGRGG
GRGTGDHYSGLSQDWGATPAGSKALSAPPARKQQQQQQGQGELEAVTGEL
EGLRLKEEDGGGNGLYHQHDDGVGTLESSDEERQDDNHYGEDTYSQNDEG
AGEEDEEEEGEVGVPEYACRYCGIHDPACVVRCVESNKWFCNSRWNTTGS
HIVQHLVKARNKTVCLHPESPLGDTVLECYNCGCRNAFLLGFIPAKSDSV
VVLLCREPCLNMGALKDMDWDLGQWMPLIEDRAFLPWLVKVPSEQEQLRA
RQINAGQINKLEELWKENPEATLEDLERQNAEGEEEGVAVLLKYDDGYHY
QNVLAPLVKMEADYDKKMKEQQTQEGVSVTWDIGLSKRKVATFKFRRDEQ
DSGLTIGDELRLKLDGFTTRLHGVNGGKPWEGVGNVLRMMDGEVALEMQD
PRCPTEVTEGYAIEFVWKSVSFDRMQGALKTFAVDDTSVSGYLYHKLLGH
DVEPQTLRVAPPRKFSVPGLPDLNHSQLQAVKSVLQKPLSLIQGPPGTGK
TVTSASLVYHLAQQGVGQVLVVAPSNVAVDHLTEKIHATGLKVVRLAAKS
RESVDTSVDYLCLHTMITTLATPEKEELSKLQQLKAELGELVPQDEAKFR
QLKRKLGKEVLKAADVICCTCVGAGDPRLKNFRFRQVLIDEATQAMEAEC
LIPIVMGCKQLVMVGDHCQLPPVITCKKAAKAGLTQSLFERLIILGLRPH
RLQVQYRMHPCLSAFPSNMFYEGTLQNGITEDERASDRVPFPWPVPSRPM
FFWIQTGAEELSSSGTSYLNRGEASGVERVCTTLLKAGVNAGKIGVITPY
QGQRAHLVLHMARTGPLRQALYKEIEVASVDSFQGREKDYIIVSCVRSND
HQGIGFLADPRRLNVALTRAKYGMIVLGNARILARVPLWHALISHYKDNG
CVVEGPLLNLQPTLLSFPPPRIRPTDRKLYVSQLSALQSASPVLPPWVAP
MQEYFMNQKQQGGREGGRSRRRDSGGQGGGQQQQQQYPPMDSRFDPRYEA
AQAAAAAMIVGEGGNEGGRAGGEVGHLVMGSAGFGYEASSQGSMSVGGGR
GGGRGGGGGYGGHFNLGMGSQSFSQMSEGGMSMYGVGGGGREEGGGFSQE
SYGGSMGEVGEGREGGGGDYPGFDSSAFRRSGPVLGGGGVKGGGRAGEVN
TRLTMSQEPESQGLFS*

Synonyms

Publications