NO29G00340, NO29G00340 (gene) Nannochloropsis oceanica

Overview
NameNO29G00340
Unique NameNO29G00340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6933
Alignment locationchr29:141070..148002 +

Link to JBrowse

Properties
Property NameValue
DescriptionTKL protein kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:141070..148002 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
IPR003613Ubox_domain
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005132NSK005132Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00340.1NO29G00340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632680gene_8207Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00340.1NO29G00340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00340 ID=NO29G00340|Name=NO29G00340|organism=Nannochloropsis oceanica|type=gene|length=6933bp
ATGGCGGAGCAGGAGGCCAGCGCTGCGACAGGTGCCACTCTACCACCATA
TTCCCCTGCCCTGCTTCCAAGGCAATCCTTTCTCGACGCGTCCGTACACC
CTGACCTGCTCTGGACGACATTGCACACGAGCATCATGCCCCCCGAGTAC
GTGCAGTGGGGCCTGGATCAAGCTCGAGCGGCTCCATACTCCGTCGACGC
GGCCGGCTTCTTTTGCATGATGGCCGGTAAGGGGCAAGTGGACATTTGTC
GCCAGCTGGTTGAGGAGTGTGGAGTGTGGCCGAATGTGCCATCGCCCAAC
GACCCGGAGAAATTGCAGGCGTTGCATATAGCAGCTAGTGAGGGGAGGTT
ACAGATGGTCCGCTATTTGGTGTTGGAGTGCGGGCGGAAGCAGCAACCAC
AGCAGCAGCAACAAAAACAGCAGGAGCAGCAGCAGGAGGCCGAAGAACAA
AAGGAGACGGACCAGGTAACCTTGAAGGCGAGAAAGAAGAAGAAGCAGCA
GCAGCAGCGGCGGAGGGTCAACGAGGAGCATGGGCAGGGTGGATGTTGTA
GAGGGAATGGAGGAAATGAGTTGATTCCAGGCCAAAACGAAGGGGGTAGT
AGAGTCGAGGAAATGAAGACATCGACAACCGAAAGCCATAAGAACACCAC
AAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGGTAGTAGCAGTA
GCAGCAGACAAGCGGCGGGGGAGAAAGAATCCTGCGACCACAGTGCTGGG
TACTTTCCCAGTGGCAGCAGCGACGGGGATGAACACGGTCTCTCCCCCAC
CACCACCGCCACTGCGCCGTCCCGCCCAGGCTTAATTGACGTGGATGCTC
CTTTGGGAGATGGACGAACCGCGCTCCACCTGGCTCTCAAGCAACAACAC
CAAGACGTGGCCCTCTTCTTAATCCGAGAGGGGGGGGCGTGCGTCAACGT
GAAGGACGACAAGGGGAGGACTCCCCTCATGTGGGCCTGCTGCATGGGCT
TGGTAGAGTGCGTCAAGGCCCTGGTGAAGGAGGGAGGGGCGGACGTCGGG
GCCCGGGACAAGGAAGGGAACGGCGTGGCAGCGATCGCCACCTCCGGGGG
CAATGTGGAAGTGGTTCGATTTCTGGTCCAGGAAGGAGGAGGGAGGGAGG
GAGGGAGGGTGGATGTTGAGGGCACGGAGCACAACAACGCAGGGGCGCGG
TTATTGTACATAGCAGCGAGATATGGGCATGAGGCATTGGTCCGGTGGCT
GGTGGAGGAGGGAAAGGCGGACATTCGGGGGCGTTCGACGGAGAGTGGAG
TGATGGCCCACCATGCGGCCGCAGCCTACGGTTACTTGCCTGTGTTGCGG
TTTTTGCTGCAGGAGGGAGGGAAGGAGGGAAGGGGGCTGAGGGAGGAGAG
GGCAGCTGACGGATTAACGGCCTTGCACGTTGCGGCCGAGGAAGGGCACT
TGGAAATAGTGAGGTGGTTGGTGGAGGAGGCGGGAGCAGACATGTATGTC
AAGGACGAGTACGGGCGGCAGCCGAAGGAAAGCGCGCGAAGATGGGCCCA
TGAGCAGGTGGTGGTGTATTTGGAGAGGAGGGAGCGGAAGGTGTTGGAGA
AGGTGAAGAAGAAAAGAAGGGGGGAGAGGGAGAGGGGGAAGCGGAATGGG
GGAGAGGAAAACATGCAGCCGTCATCGGTGGGGATGGACGAGGAGCAGGG
GAAGGAGGGTGGGAAAGGTGGAGGGGTTGGAGGCTCGCGAGATATTGGGG
GGAAAAGAGGCAGGAGCAGCAGCAGCAGCAGAGAAGCAACAACTGGTGAT
GCAGCAGCGTGGGCAGGACGAGGAGGAGGAGAATTTAAAGGAAGAGGAGG
AGACGTTAAAGTCGATGGCAGCGGTGATGCCAAGTACGACAAGAAGAAGG
GCGACAATAACAAGAAGGATGCTGCGGCAGCTGCTGCGACAACTGCTGGT
GGTGCTGGTCTAGGTGTCGGAGATCCCAGCGCAACTCCCCCAGCCTATGC
CAGCGAAGCCCATGTCCACGCTTTCCTTCACGCCCGCTTTGAGGCCATCA
TGCACCTCTGCAGGGGGGTGCTCTTTCTAGCCCCCCTCCCTACCTCCCTT
GTCTACGGTACCTTCCACCAAAAAATGAGCTTCACATTGAGGCTTCTCAA
GGCTGTGAAGGCACACTTGGACCCTCTTACCCTCAATCGCCTCCAGAATG
AGCTCCGCGCTATCCTTCCTTGCCTCCCTCGGCTTTCCTCTGGCCAGGAC
TTGCTACATCCCTCCTCTGGCGATAGAGAGTCCCCCCTCGAACAAGGACC
CAAATACCTTTCGCTTTCTTTTGCGATGCGTGCCGCGTTTCGGAAACGTG
CAGCAGCGGCCGCAGCCGCATGCGAGACTACCCGAGGTCAGTTAGGCGGG
GGATCGTCCCGATGTGGATTGTCACTGGCAGCGGTGGAAAAGATGTGCGC
AGACGAGACCCGACGGGAGTTGGGAGATGCGATAAAGTGGATATTACTAG
GGGAGGTGGAAATAGAGAAGGAGGGAATCAGATGGAAGCATGTACGAGAT
CCCCGTGACCCGGTGTGTTGGCGATTGAGCAAGTTTATGACGGACATGCA
CAAGCAAGAGACATCTCTAAAGAGTCTGTCGGCGGAAGCGTACATCTCTG
CAGTGATTGGAGACATGCAGAAGGTGGTAGGAGAGGGGGGGGAGAGACCG
GGGAGGGGGGGCGGGAGAGAGGAAGACGGGAAATATAGGATGAAGGTGCA
GGACGACAACGAAATGGAGGGAGGGGGAAGGGGAGGAGCTGCTGGTGGAA
AAAATGCCTTTACCACGGAGGAGAACGATACAGAGGAGAAGCAGAAGGAG
CAGAAGTGGATCGGAGGACAGGAAAGAAGGCGGGAGAGAGCAATGGCCGT
ACTGGATGCCTTGTTGCGGCTCCAGCGAGATGTCCCTCGCTATCGTCAGT
TTCTTTTTGACCTGTTGGTAAGTGAAGGTGAAGAAGAAGCATTGAGGGGG
AGGGGAAGAGAGATGGTGGATGGAAGCGAAGACGGGGCGAGGCTGCAAGA
AGCGCAAGAGCAGCAGGAGCAGCGGGAGGAGCAGCAGGAGCAGCAGCAGG
AGCAGCGGGAGGGTCACCATTATCAGCAGCAGCAATTATCCATCCAGAAA
ATCGTGGGAAAAGCGGTTGCCTTGGCCTCGGAAAAAACGAAGAAGACGAA
GGAGGAGGAGGAGCGCCGAGATAGGGAAGAGATTTTGTCCCCGGCGGAGG
AATTGGTATCTGCGGCCATAAAGGAGGGGATAGAGTATTTGTGGGCGGAC
CGAGTCTTACAAGTGCAAGAGTGCACCCTCCCCTTGCTCCCCGACCTCTC
GGAGGATGAAGAGGGGAGGCTCCAGTGGGCACTCAGAGGGAAGTGGGCCG
ATGGCGATCTCGATGAATCGTGGGTCCCCCCGGTGTATAGGCGTGTGGCG
GATGCTATTGTGGTGTTAAAGGGATGCAGGGCCCGAATTCGGAAGGGCAG
GAGGGGGTTGGTGTCTCGCGCGTTGCAGATGCTGATGGAGGGAGAGAGGG
AGGAGGAGGTGTTTAGGAGCATTTTTGTCGATGCAGTGCAGGAGAAGGAA
ATGAGAATGAAAAAGGTAACGGCAGGCATGTCATTGAAAGGAGAGAAGGA
AGACAACGTGGGAGCAAGGGAAGATGAGAAAGTGAAGGGGAGAGAGGCGA
TAGGAGAGGGAACGAAGACGCCGCCGCCCATATCCGCAAAGCCTTTGCAT
GAGGCTTGTGATGGTTTAGGGTATGCCCCTCTCCCTCTCTTGCCCCCGTG
TCCCCACCAAGCCATTCAAATTCTTTTTCGGGCCAGCTATACCCCCGCCC
AGGCTTTAATCGCCACTGAAGGCCTCCCACTCCTTCGCGCATTGCTCTTG
AAAGGGGGATTGCCACCGGAAAGTGATGTGCGACAGGTCGTGTGGGCGCT
GTTGGGAGAGGAGGAAGAAAAAGGAGGAGGAAACGGGGCTATACGAAGGG
AAGAAGGAAGTAAAAAGTACCAGAAGAAGCATAAGAAGAAGAGTGCGTCA
GCGGTGGTGCCTGTAGCGGTGACAACAGCAGCGGCAGCAGTATCACCATC
CTCACCAGAAGTAGTAGAAACGGGAGGAGCAACTATGAACAGCACGACAG
CGGCATCTGCATCATCCCCGACTGCTACTGCTGTGGCGGCGGCTACTGCT
GCCGCCACCGCCACTGCCACCGAGCGGTGGGCGACAATCCAGGACAAGCT
CTTGGCAATAACGCAGACTCCAAAGACTCGTCGGTTCTGGTCCTCGGGAG
TGCATGGTCGCGTGTTAGGGACCCTGGGTATCATGAGGGTGTACGAGAGG
GAGGCGTGGTGGCTGAGCGAACGGCAGGCCATACATTGGGTCCGGCGGGC
GAATGAAGAGGTGGCGAGGGAGAAGGGGGAAATGAACGCGACGGGCGGAA
GCCGCGTTTTTGGCCGGGAGGAGAGGGACCCAGATGGGCCTGATATCTCT
GTTTTAGGCGCTGGTGCTCTCCTCACCCTCACTCGCGTCTGCTACCTGGC
TGTAGCTCAGCGCAATGGCCCCCACGAACCCCCTTTCTCGTGCGGTGGTA
GCGGCAATGGCAGCAGCAGCAGTAGCAGTGGTTGTAGCAGCGGCAGTAGT
AGTGGTTGTAGCAGCAGCAGCAGCAGTAGCAACATTGCCAACCGTAGCTG
TAGCAGTAAGAGCAGTAGCGGTAGCAGTAGCACCGGTAGCAGCAGCAGCA
GAAGTAGTAGTGATAGTAGCAGTAGCAGTAGCAGCACCAGCACCAGCGAC
AACAACACTGTCAACCTCAGGCAGCCGTTTTTCGGACAGCCGTGGGAGAG
CGTGGAGGAAGTGAGTGAACAGCTGTCCTTCGTGGAAAAGGTATTGCGGG
CTCAGGCCATCGCGTTAAGGTCTCATCTTGTAGCATCAGGAGACGTTTCA
GGGGCTGCAGGGCTGGCATTAGGCGCAGCAGCAGTGGTAGATTCAGCACC
AGCAACGCAAAGGGGAGGTGGGGAGGAACTCGAAAGAGAGTGGATAGCGT
TTGGAAGTGAAAGCGGAGGAGATGGGAAAGAGTCGAAGAAGAACAAAAAA
GAGAAACAAAAGCAAAAGGAAAATGAGGATGAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAACAACAAGAGGAGGATGAACAGAAGGCAGTGGATG
CTGCCGTCAAGGCCGCGATGGAGGGAGCGACAGAGGAGGAGGACGAGGAT
GGTGGGACGGAGTGGGAAGGAATCGGAGAGATTCTCCGGTCTGTATGCGG
CCCTAAGGATTCTGATCCCAAGAGTTGTGATTCTAAGGATTCTTGTTCTG
AGGATTGTGATCCAAAACTAAGGACTGAGCGAGGTTTACTATCTGCCTGG
ATGTGGCTTGTGAACCTGTGGCTTTATCGAGAGCATGAGCGGGAGAATCT
GGAAGCAAAGTCCAAACCGACGTCAATCTTGTGGGACATGCGAAAGACCA
TCAGGACACTCGAGATGGTGATGGTGGATGTTGAATGGCTTAGAATATGG
CGGGAGATGGGGCAGGCCAAGGGTGAATTAAATGATGAGGAAGGAAGTCG
GAATGAATGCGAAGGTAGGGAGATGGAGAAGGCAGAGAGTGAGGGCTGTG
CGGTTTGGTGGGACGAAGGAAAGGCTCGTCGAAAGGTAGGGAGGCAAGTC
CTGGATGTTTTCCGACGTGCTTTCATCTCAATTATGGACTCCGTTTGTGT
GGGGTTGATGGATCGGGAGGATGCGGGAGACCGCGAGGATAAGACGTATG
CCGACCTTACGTTGCATGCATTGATGTACTTGAAGGGAGATTCCTCGAGT
AAAAGGAAGTGGGAAAAGGAGAGAAAGAACGGAGGAATGGAAGAGAGAAT
CGCCAGGGCGATCACAGTGCGCAGGAAGTGGATCCTGATGCAGGAGTCAC
CTGACTACTTCCACGAGCTCTTTCTCTTTGCCGCTCTCAGGATGAAGAAA
TACTGTGATGTGCTTAAGGCACGCATTCCTGCTTCCTACCGCTCCTCCTC
CTCCTCCCCCTGGTGGTGGCATATTTATCGGCTGGAAGCAATGCAAGAGG
TCATGGAGAAATATAGCACCCATTTTCTGCCCCACGCTCTCCGGAAGGCC
AAGGCCGTGGCTTGGGAGAAAGAGCTGAGGCGGCGGACAGGCGAACCAAA
TACTGTTGATGTAACTGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAA
TTGTGACAGCAGCGGAAGAAGAAGAAGCGACAGCAGAGAGAGATGCAGCG
GCGACAGTAGCAGCAGCCGCAACAGGAACAGCCGAAGATGTCGCATCAAC
AAGCGAAGAGGCATGCAGCGAGGAGATGGAGGCAGCTTCGGCAGAAAACC
CTGCTGCTTCCATTCATCTGGCAGCTGTAGATCTGAGTGGGCGTGATGAC
GGAGAGGTTGAGGGAGAGGGCCTCTACGGCGAGCTCGCTTCTCCCCCTGC
TGGGAGTGAAAGAAGGAAGGAGGAAGGTGGTGACGTGGAGGAAGAAAAAG
AAGATGAAGAAGAGGAGGAGGACATGCCTTTCGACAAGGAGGACGGAGCC
CCGGAGGATCTTATTTGTCCACTTTCGTTGTGTTTATTCGAGGACGTGGT
GATGGCGATGGACGGCATCAGCTACTCCCGCCAATCGATTCAGTCGCACA
TCGATTTTTGCAAGGCAAAGGGGAGGCCCGTCACATCGCCCATGACGGGG
GAGAAGATGGAGACACTGTTGGTGCCAAATGTGATGGCCAGGAGGATGGT
GTTGGAATATATACAGGAGAAGAAGAATGAGTGGACCCGACGGAAACGAG
GGGAAGGTGTGGGAAGACAGGAGTCCACAACAGGAGGAAAAATTATTGAG
GCGGAGAAAGTGAAGAAAGGTTTGTATAGCTAG
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protein sequence of NO29G00340.1

>NO29G00340.1-protein ID=NO29G00340.1-protein|Name=NO29G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2311bp
MAEQEASAATGATLPPYSPALLPRQSFLDASVHPDLLWTTLHTSIMPPEY
VQWGLDQARAAPYSVDAAGFFCMMAGKGQVDICRQLVEECGVWPNVPSPN
DPEKLQALHIAASEGRLQMVRYLVLECGRKQQPQQQQQKQQEQQQEAEEQ
KETDQVTLKARKKKKQQQQRRRVNEEHGQGGCCRGNGGNELIPGQNEGGS
RVEEMKTSTTESHKNTTSSSSSSSSSSSSGSSSSSRQAAGEKESCDHSAG
YFPSGSSDGDEHGLSPTTTATAPSRPGLIDVDAPLGDGRTALHLALKQQH
QDVALFLIREGGACVNVKDDKGRTPLMWACCMGLVECVKALVKEGGADVG
ARDKEGNGVAAIATSGGNVEVVRFLVQEGGGREGGRVDVEGTEHNNAGAR
LLYIAARYGHEALVRWLVEEGKADIRGRSTESGVMAHHAAAAYGYLPVLR
FLLQEGGKEGRGLREERAADGLTALHVAAEEGHLEIVRWLVEEAGADMYV
KDEYGRQPKESARRWAHEQVVVYLERRERKVLEKVKKKRRGERERGKRNG
GEENMQPSSVGMDEEQGKEGGKGGGVGGSRDIGGKRGRSSSSSREATTGD
AAAWAGRGGGEFKGRGGDVKVDGSGDAKYDKKKGDNNKKDAAAAAATTAG
GAGLGVGDPSATPPAYASEAHVHAFLHARFEAIMHLCRGVLFLAPLPTSL
VYGTFHQKMSFTLRLLKAVKAHLDPLTLNRLQNELRAILPCLPRLSSGQD
LLHPSSGDRESPLEQGPKYLSLSFAMRAAFRKRAAAAAAACETTRGQLGG
GSSRCGLSLAAVEKMCADETRRELGDAIKWILLGEVEIEKEGIRWKHVRD
PRDPVCWRLSKFMTDMHKQETSLKSLSAEAYISAVIGDMQKVVGEGGERP
GRGGGREEDGKYRMKVQDDNEMEGGGRGGAAGGKNAFTTEENDTEEKQKE
QKWIGGQERRRERAMAVLDALLRLQRDVPRYRQFLFDLLVSEGEEEALRG
RGREMVDGSEDGARLQEAQEQQEQREEQQEQQQEQREGHHYQQQQLSIQK
IVGKAVALASEKTKKTKEEEERRDREEILSPAEELVSAAIKEGIEYLWAD
RVLQVQECTLPLLPDLSEDEEGRLQWALRGKWADGDLDESWVPPVYRRVA
DAIVVLKGCRARIRKGRRGLVSRALQMLMEGEREEEVFRSIFVDAVQEKE
MRMKKVTAGMSLKGEKEDNVGAREDEKVKGREAIGEGTKTPPPISAKPLH
EACDGLGYAPLPLLPPCPHQAIQILFRASYTPAQALIATEGLPLLRALLL
KGGLPPESDVRQVVWALLGEEEEKGGGNGAIRREEGSKKYQKKHKKKSAS
AVVPVAVTTAAAAVSPSSPEVVETGGATMNSTTAASASSPTATAVAAATA
AATATATERWATIQDKLLAITQTPKTRRFWSSGVHGRVLGTLGIMRVYER
EAWWLSERQAIHWVRRANEEVAREKGEMNATGGSRVFGREERDPDGPDIS
VLGAGALLTLTRVCYLAVAQRNGPHEPPFSCGGSGNGSSSSSSGCSSGSS
SGCSSSSSSSNIANRSCSSKSSSGSSSTGSSSSRSSSDSSSSSSSTSTSD
NNTVNLRQPFFGQPWESVEEVSEQLSFVEKVLRAQAIALRSHLVASGDVS
GAAGLALGAAAVVDSAPATQRGGGEELEREWIAFGSESGGDGKESKKNKK
EKQKQKENEDEQQQQQQQQQQQQQEEDEQKAVDAAVKAAMEGATEEEDED
GGTEWEGIGEILRSVCGPKDSDPKSCDSKDSCSEDCDPKLRTERGLLSAW
MWLVNLWLYREHERENLEAKSKPTSILWDMRKTIRTLEMVMVDVEWLRIW
REMGQAKGELNDEEGSRNECEGREMEKAESEGCAVWWDEGKARRKVGRQV
LDVFRRAFISIMDSVCVGLMDREDAGDREDKTYADLTLHALMYLKGDSSS
KRKWEKERKNGGMEERIARAITVRRKWILMQESPDYFHELFLFAALRMKK
YCDVLKARIPASYRSSSSSPWWWHIYRLEAMQEVMEKYSTHFLPHALRKA
KAVAWEKELRRRTGEPNTVDVTAAAAATTTAAAIVTAAEEEEATAERDAA
ATVAAAATGTAEDVASTSEEACSEEMEAASAENPAASIHLAAVDLSGRDD
GEVEGEGLYGELASPPAGSERRKEEGGDVEEEKEDEEEEEDMPFDKEDGA
PEDLICPLSLCLFEDVVMAMDGISYSRQSIQSHIDFCKAKGRPVTSPMTG
EKMETLLVPNVMARRMVLEYIQEKKNEWTRRKRGEGVGRQESTTGGKIIE
AEKVKKGLYS*
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Synonyms
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