NO29G00110, NO29G00110 (gene) Nannochloropsis oceanica

Overview
NameNO29G00110
Unique NameNO29G00110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length982
Alignment locationchr29:43375..44356 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:43375..44356 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL064nonsL064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR079ncniR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00110.1NO29G00110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00110.1NO29G00110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00110 ID=NO29G00110|Name=NO29G00110|organism=Nannochloropsis oceanica|type=gene|length=982bp
ACAGCACTCTTGAACATGGTCTCGACTCGCCGGCAGTCCGCCAAGCTTGA
GGCAACCAAACAAGAAAAGAAGAAGACCGTGGCCAGCGCCGCTATAGGCT
CAATTGCGGCCGTAGTGCTGGGTCTGCTCATCTTCTTCATGCTACCCAAG
CGGGTAGAGGGATGGACCCGCTCATCCCTCCCCCTTGCCTCTCCTTTATC
TCCCTCCGTGgtgagtcctcctcgcgggctgtgtccttcgtcctcctctc
ctatacctcgtccttgtccctctcttctatattcctctctctcctcctcg
tggacaaaagtggcacccaaagtttccgaaaagaagaagagagaaaaaca
gcaccagcaccagcaccagctccagatcgcaatcaaagaggggaagcaga
gtcatcgcggcctctgtctcatttcctccctcttccttactcctcttctc
ctcctactactattaccctcagCGGCCGTAAGAGCAGCACCTCTTCTCTC
CGGCAGCAGCAGCAGTAGTAGCAGCAGTAACAGCAATGACAGGATGGCAT
TTATGCAGCTGCTCGTTTCTTCTGCTCCTCAAGGAAGAGGGAGGGAGGGA
GGGAGGGAGGGTGGGGCAGCGACAGCACCATCGTCATCAGGGTTTGGTTT
GATGGATTTGGAGAGCGAATTGGCGGAGGCTGGTTTGTTTCAAATGGGGG
AAGGACGAGGGAGGGAGGGGGGGCTGGAAGAAGGAGCAAGGCCAGGGAAG
GAGGCGGAGATGAGCAGCCGTCTTCTTCCTTCGTCCTCGTCGTCCTCCTC
AGCAGCAGCAGAATTAGACCCGTTGGGCGATCTTTTGAACAGCAAACGGA
AAAGTGTTGAACCGAGGACGCATGGCTTGTGAAGGGGATGGAAGGAGAGA
GGGAAAGATATTTGATTTGTGCAGTGCAAAAAGGTAAAACAAAAGGGAAA
GGGGTCGCTGGCAACAGCCGAGTGAGAATTTG
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protein sequence of NO29G00110.1

>NO29G00110.1-protein ID=NO29G00110.1-protein|Name=NO29G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=153bp
MDPLIPPPCLSFISLRAAVRAAPLLSGSSSSSSSSNSNDRMAFMQLLVSS
APQGRGREGGREGGAATAPSSSGFGLMDLESELAEAGLFQMGEGRGREGG
LEEGARPGKEAEMSSRLLPSSSSSSSAAAELDPLGDLLNSKRKSVEPRTH
GL*
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Synonyms
Publications