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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr28 | genome | chr28:463531..469136 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO28G01470 vs. NCBI_GenBank
Match: EWM20353.1 (hypothetical protein Naga_101064g1 [Nannochloropsis gaditana]) HSP 1 Score: 90.9 bits (224), Expect = 1.400e-14 Identity = 56/134 (41.79%), Postives = 69/134 (51.49%), Query Frame = 0
Query: 1 MRTATGLFLGLGACLTPLAVGKKQD---HAMDFLKMVEAQAAEWEDRKLQLLKSNAGSQGLGGLVGA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSFIGAPAEKASVDTTVTPVGKPFVPSL 127
MRTA GL LGLGACL P A G+K HAMDFLKMVEAQA +WE+RKLQLL + + ++G+G LVGA S +G PA +VDTT T G+ + P+L
Sbjct: 1 MRTAAGLILGLGACLAPRAHGEKHHDSRHAMDFLKMVEAQAKQWEERKLQLLNAGSATKGMGALVGAISSVSQASTSSGGVGKGGLLSGPMAGNVLQNALGGGGDKSSLVGLPAFTGTVDTTATGTGEVYKPAL 134
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01470 ID=NO28G01470|Name=NO28G01470|organism=Nannochloropsis oceanica|type=gene|length=5606bp
GCTCCTCCTTGTGTCGCCTTGCATCGGTCCAGTTCCGGTGGACGTGTGAA
ACAAGCCCTTAGCATCGTCGTCGCCCTTGATTTCTACCCTTCGTTCCCCA
CCTTCGTGCTTACATTGGCATGAATCGGCAAAGTAGTCGCTGTCCTCTTC
GAAACTGCTCTCGCCTTACGCCTTACATTCACTTGCGCCACACATGCGAT
CTTCTTCTTTTCCCTCTCTCTCTTCCCCCTACCCCCATCCTCCAGCAGCT
CACCTACCAAGGCGACAGACAACGTCATACACTTCTTCTTTCTTGCTGTT
GTCTTCGTCCTCTCCTGCTTGTGGATTGTCTTGACGTTGGAGTTCTCCAT
GCCCACCCTTCTCGCCGCACGACGGCAACGCAAGAGGAGACGCAGTGCTT
CGTGCCACACACACATTGATACGCCCACGAAGTTACCAGCCCTCTTTCGT
CCAACCATATCACACACGCACACACACATTCACATATACACCTATACATG
TACACATAAAATACAGGGGAAACATCAAAACTACGCCTCACGTCCGCGTC
GCCGTCGTTTCTCATCCCACGTCTCGTCTCTCGTTCAGGGGAAGAAGTAG
AAGGATGCGCACCGCTACGGGACTCTTTTTGGGCCTGGGTGCTTGCCTAA
CACCCCTTGCCGTGGGGAAAAAGCAGGACCATgtaaggaggaagagaggg
aggaggagggaggataagggcaagcaggcaggaagggagggcagcgatat
gagcaaggtcgatggagaccaaatgtgtgatctgccaatacgggcgtcta
aatcctacctttctcctctctttctccctatgcatcaccagGCGATGGAC
TTCTTGAAGATGGTGGAGGCTCAAGCCGCGGAATGGGAAGACCGCAAACT
GCAGCTCCTCAAATCTAACGCAGGGTCTCAGGGGgtgagtatattgcccc
tccttccctctcccttttcctgccttcttccctccctcctcccttccttc
cttcccttccttcccttccttccttgtcgccctctttttccccctctttc
ttccttcttcttttccacggggagggggagtactacgattttcggtttaa
aggctcttaccggccgatgccgggagtctgggatagagcaaaaatatccc
caagaagagggagggagggagtaagggagggagtaagggaggaatatatg
cttgttgtggaagggcataaacaggggggatttgacagtgcagtgcctgt
atccacccactcgctttcaaatgtcctcaccctcccttccctccctcctt
ccttccctccttccttcctctcttcctctattccttgaaataagCTTGGA
GGCCTCGTGGGTGCCATCTCCAGCGCAAGCAAAGCTGCTGCCGGCGGATC
CTCAGGCCTGAGCGCCACGGGTGGGCTGCTGAACGAGCTGCTGGGGGGTG
GAAGCAGCAGTGGAGGAGACAGCTTCATTGGTGCGCCCGCCGAGAAGGCC
AGCGTGGACACAACCGTTACACCTGTGGGCAAGCCGTTTGTGCCGTCGTT
AGGGGATGGAGGGAATGCGATGGGCTTGCCCACGGTGGGCGCTGCGGTGA
AGAAAAGCGGGGCAGCAGAGACGTGTGGTGCTCCCTTGTCAATTTCAGTG
GAAAGTTTGACTGAGTATCGCGTATACGTCGATGGAAATCAGgtgcgttc
attcttcctccctcactccctaaagcgtgtgtggtatgggtagctacagc
agtagcaacagtagtagtagttgttgctgttgtcgatgttgttgttggac
cagcagtagcggtagcagcagcagcagcagcagcagcagcagtagcagca
gtagcaggggaagaagtgtctcgaaccaataaaacttcctttcttccctc
tctctcgggtcctccctccctctctcatgacttaaatgttttgagctcaa
ccattcccagcaccatccatgtcactcacctcttcctccacccccctccc
tccccccctccttcaacgctctcagGTCGGTTACAGTAATGGCGTGCAGA
TGCAGCGCTACGAGACAACCTACGGGTCATCTGGCGCCGTCACGGTGGCC
ATTGAAGCCACGCGCGACAGGGACATGTCTAACTTTGCATgtagggaggg
agggaaggagggaaagacggagggagggagggagggaaagacggagggag
ggagggagggagggagggagggaggggacttgcggtcgtttgaatgatgg
actgagagagagcggggcatacacaatgcatttcgcaccagctcactcac
cttccctccctccctccctccctccttagCCGTGGACGGGCTGGCTGTTA
ATGTAACGGTTTGTGGGGAGACGTTTATTTCGGATCAGGACTGGGTGTGC
ACCGACACCCGCCCCTGGACCACCACATGGCGCCTGGGGTCTTACACACC
CTTCCAATGGATGCAAGCGGCCCTCGTGCGCGATGCGGCAAAGgtagggg
ttaattaattcatctgttagctatcaatttaaatatttcgtatttaaatt
tttgaattgacttatttttaatgatggtgcttgtttgtttgatggggggg
gttgggggtggagctttccctccttccttctttccctccctccctccccg
ctcctgatatcttgaaactgaccacgcctctccctccctccctccctccc
tccctccctccctccctccctccctccccagCTCGTCGATGGCTCCACCT
CCTTCGCTATTTGGTCCAAGCCCAGCTGTGACTCCAAACCAGGCGTGCCT
GAGCAAGCCTTTTGCCGCCGCACCCTCAAGCCCACGACCCCCTGCCCCAA
ATACCTTCCATGCTACACCGAACAGgcacggctccttccctccctccctc
cctccctccctccctccctccctccttccctccctccctccctccctcct
tccctccctccctccctccccgttctgggtcgttgaagagctatgccatc
ttttcctcctccccttccctgtcgcattcatacacataataatgataata
ataacaataaacaagattgtcaactcaaccaacaagcactccccctacct
ctcccccaccctccacctagACCACGTCCCCCCCCGACACGGGCTGTTTA
ACGGGCTGCGTTATGGAAACCGTTAGCAAGGACAAATGCGCCACCATCGC
CCATCAGCTCACTGGAGGATGCGGCTCCTGTTCTTCGGCCTTTATGACGT
ACTACAAGCAGTATTGCAAAACGCAAGGATGCTCGGCTGAGCAGTGCCAG
gtgcgtgcgtgcaatttaattgccctccttccctccctttttccctccct
ccctccgttggctctgtttctcgaatgatggatggcggtctcagatggtc
gcactttctcgaaacggactgttgcatccttccatccctccccccttccc
tccttccctccttccctccttccctccttccctccttccctccttccgag
atctactcgtctcacccttcacatgattccaacacaaatctaatctccta
tcctccctcccccctccctccctccctcccttcctctttcagATGCCGTC
GGAGAACGACGGCTTCACGCCCAACAGTGCGTGCCTCGACGGTTGCGGCT
TGAAAGCCTTCAACTCCCAATGCGAACAACAAGCACACCAGTTCCAAAGC
Ggtaagcctcctccctccctccctccctctttctttacccatgtgctccc
tccctccctccctttctccctccctccctccctttctccctccctccctc
cctccctccctccctctttctttacccatgtgctccctccctccttcctt
ccctccctccctccctccctccctccctccctctttctttacccatgtac
ttcctccctccctccttccttccctccctccctccctccctccttccctc
cagGCTGCGCCTCAACCTGTGGCCCCGAGACGTTATCATTTGCCCGTGAT
AAATGCCTCTCTACCTACAAGTGCTCCCCAACCCAATGCTCTATTTTTGC
GGACAAAGGCGCGGTGGACGGTGGCTTGGCAAATCAAGTTGGAACCGGAG
GAGGAGGAGGAGGAAGTACGGGAGGAGGAAGCACGGGAGGAGGAGGAGGA
GAAGGAGGAGGAGGAGGAGGGGTGGCGCCTGCACCTGCTCCGGGAGGGAC
GCCGGGGTATACGCCCCCTCCCACGCCCGATCTGACTTGCTTCTTCCGTT
GCTTGAACGGAATGAATAAGTTGGAGAGTTATTGCGACAAGgtaagtggg
agaaggggggggagggggggagggagggagggagggacggagggggcggc
attgacacgttggacttcgtggtgatgagcacggaagggagggaaggagg
aaaaggaaggaaggagggagggaaggagggagtggtacctacttgttttc
cgtatcctccccatctatcgacctgctcccacgatgaccatctcatctca
tgccccccctctgtcccttcctcccttcctccctccttcagATCAACTAC
GCCTTGACTGCGAACTGTCACAATTGTCCTGACAAGATCATCGAATGGGC
CAAGACGTCATGCGTGGATTATCAGgtagggagggaggaagggaaagagg
gaggaaaggagggagggagggatgttcttggaatgaatgctctcgtcatt
tgattcatctatttttctctgtcttcctcctctttgattctctcatcgta
ctgctcgtcgcttcatttgctttcctacccctcactgtgtctcatcgttc
tgctcatctctgaatattcttttctgctcttcaacagGATCCTGATGGCA
ACAAGTGCACGCCTGAGCAGTGCGCAGCCACCTAAGAGGAAAGGTGGCGT
GAAGGAGATAGGAGGGAGGGAAGGAGGGAGGAAGGAAAGGAGAGGAGGAT
TTCATTGGTTTCCTTAATTTGGGGTTAGAAGGTAGTTTGTTTGGAGGAAG
GGAGGGAAGAAGGGAGGGAAGAAGGGAGGGAAGGAAGATGTGTGCAGCGC
CCTTGAGGTGACGAGTAGAGGAGGGAGGGTAAGGTTAGGGGCAGGAGGAG
GAAGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGTAGAGGCTGGAAAAGAG
GAAGAATAACAAAAGTATAAATAGGAAATGGATGGGTTCGGTTGTCCCCA
TCAAGGATGATAAAGGTTAATGGGCGAATGTGGTAAACGAGAAAGGATGA
GGGGGGATAAAAGTTTGCAAAATGTGGAGGAAACAGAAAGGAGGAGAGAC
CAATGACCGACGAGAACAGTTGAGGGGGAGAAAAAGAGGATATTTGTTGT
GTTTACGTGTGTGTAACGAGTGTAACGAGTTGGGATTTGACCAGGCAGAG
AGGGAATGAGGAGAGGAGTGAAGAATGAGGAGGGTTTGGAGATGTTTGCT
CGTTCAATTATTCGATCTCCTGTCTTCTGTCTGTCCTGTGTGATAACAGA
TAGAAGGAAAAATCTGCGGCTATAGAGAAAGAGCTGGCACTGACTCACTT
ACTTCATCTTCTAAACATGAAAAGAAAGGAAAAAAAAAACACAAAGCGTA
GTAGTA back to topprotein sequence of NO28G01470.1 >NO28G01470.1-protein ID=NO28G01470.1-protein|Name=NO28G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=567bp
MRTATGLFLGLGACLTPLAVGKKQDHAMDFLKMVEAQAAEWEDRKLQLLK
SNAGSQGLGGLVGAISSASKAAAGGSSGLSATGGLLNELLGGGSSSGGDS
FIGAPAEKASVDTTVTPVGKPFVPSLGDGGNAMGLPTVGAAVKKSGAAET
CGAPLSISVESLTEYRVYVDGNQVGYSNGVQMQRYETTYGSSGAVTVAIE
ATRDRDMSNFASVDGLAVNVTVCGETFISDQDWVCTDTRPWTTTWRLGSY
TPFQWMQAALVRDAAKLVDGSTSFAIWSKPSCDSKPGVPEQAFCRRTLKP
TTPCPKYLPCYTEQTTSPPDTGCLTGCVMETVSKDKCATIAHQLTGGCGS
CSSAFMTYYKQYCKTQGCSAEQCQMPSENDGFTPNSACLDGCGLKAFNSQ
CEQQAHQFQSGCASTCGPETLSFARDKCLSTYKCSPTQCSIFADKGAVDG
GLANQVGTGGGGGGSTGGGSTGGGGGEGGGGGGVAPAPAPGGTPGYTPPP
TPDLTCFFRCLNGMNKLESYCDKINYALTANCHNCPDKIIEWAKTSCVDY
QDPDGNKCTPEQCAAT* back to top
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