NO28G01310, NO28G01310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01310 vs. NCBI_GenBank
Match: EWM20850.1 (hypothetical protein Naga_100514g1 [Nannochloropsis gaditana]) HSP 1 Score: 176.4 bits (446), Expect = 4.900e-40 Identity = 86/159 (54.09%), Postives = 111/159 (69.81%), Query Frame = 0 Query: 90 PLSIAYPSYLLDPEGCNDKKLEAGLPMMGSPITEEKSSRPTPITVYRGDIPLPSGSEYKSGETLSIKLEGRSGQYCMEVRGGPALFVDGACDGKRVTGTQTLALPMGEVGSNGTSTLEDISIHAGVSDHFGHVTLVKPFLLRAP---TALGGSSSEAAF 246 PL+ YPSYLL+P+GC +KLE G +MGSP+ EEK+ + +PI V RGD L SGSEYKSGETLS+KLEGR+G YCMEVRGG A+F GACDG RVT LALP+G+ TL+ +++H G++ +G VTL+ PF+L P +A G + AF Sbjct: 97 PLTWGYPSYLLNPDGCRSQKLEVGFDIMGSPVVEEKAMKESPIVVLRGDTALHSGSEYKSGETLSVKLEGRAGMYCMEVRGGAAMFSGGACDGTRVTEPDVLALPIGD-----KETLQTVTLHVGLASRYGPVTLLPPFVLHPPGKDSAAGKGERDGAF 250
BLAST of NO28G01310 vs. NCBI_GenBank
Match: OQR97487.1 (transmembrane protein [Achlya hypogyna]) HSP 1 Score: 102.8 bits (255), Expect = 6.800e-18 Identity = 122/476 (25.63%), Postives = 203/476 (42.65%), Query Frame = 0 Query: 444 SLLLPAGINTILWARGGREGAGAWPAMHAASGSVDVNWKADAGGAVTKAVQS-----HEPIMIPGVILLLLPLXXXXXXXXXXXXXXXXXXXXXXXXLGRLLLQRRLWKGMKGDSLVAKTITSAGAFRWGEVMVQAFVLLALIGLGVHWYLWGQALGWSQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGI-SIDQAPLLWRASPSSPVAAAFGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWRSTKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLPXXXXXXXXXXXXXXXXXXXXXFIETWHPYSACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCPRVMVDGPYGRCSLSLPCYSHLLLLGGGVGITPLSSTLAWLRKR 914 +L+ A +N ILWA AWP++H+ G V + AG A A++S + ++ + L+ L R+L + + + L + S + GEV V + ALIG+GV +L Q S R ASV++G + +T LML+ LP ++ W + + ER + FHRALG L +V +HL + +ID A + V +G ++I + L AL VRRR ++LF H ++A + A LH + F P+ + F L RA+C+ + +T + E+ + + + A P ++ + +P WHP+SA + D + F IK R ++ V A + V+V GPYG+ ++ + Y H++++ GGVGITP+ S + R + Sbjct: 145 TLVNGAAVN-ILWALSD----NAWPSIHSERGVSRVVLTSAAGPAQVLALESSIVTTYTTAIVAAAFVTLVALGLVTTHTGDF----------------RILHHKAMLAPPAPNHLFLGFLQSLADVKLGEVGVGIVYVAALIGVGVSIHL--QFENESLNRLASVTTGHLALTNLMLLLLPVARGKHWELVFGISHERILKFHRALGRLCVVFTVLHLILNAIDVNVTTSTAYGTQQVVPLYGFVSFIAFASMGLLALEPVRRRWYELFYYYHRVAAVVGIVFAMLHSRTVAYAMIF--PVAIYGLSGVFRL--RAFCTH--FATTVEVQGESSVTLILPSTAQTKRWAATMNPCAFFWVCVPSVS-------------------ATEWHPFSAI-VTPDQDSIGFCIKSRARGSFVDGVYQAASE--ASTLTVLVGGPYGKLTVDIHKYDHVVMVAGGVGITPMLSLMNQTRDK 569
BLAST of NO28G01310 vs. NCBI_GenBank
Match: OQR85564.1 (transmembrane protein [Achlya hypogyna]) HSP 1 Score: 100.9 bits (250), Expect = 2.600e-17 Identity = 106/344 (30.81%), Postives = 151/344 (43.90%), Query Frame = 0 Query: 573 QAFVL---LALIGLGVHWYLWGQALGWSQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPLLWRASPSS------PVAAAFGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLP----ATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWRSTKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLPXXXXXXXXXXXXXXXXXXXXXFIETWHPYSACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCPRVMVDGPYGRCSLSLPCYSHLLLLGGGVGITPL 904 QAFV+ + L+GL + L G RAASV G +++ L + LPAS+ G W L +P R + FH+ LG L L +H +++ A + W SS V A+GL A I + LSA VR+ ++LF +H F +L LH A L YV L F+ + + T ST L L+A + + + L + P Y+ + +P WHP+SA S T L F +K RGP T++ ++ LA P V+V GPYGR SL Y H+LL GG+GITP+ Sbjct: 256 QAFVVALYMMLVGLTL-GLLVPHFSGLPPVRAASVVCGHLSVLHLAFLLLPASRGGHWGYLFGVPHTRLVTFHKWLGVLFLATLLLHFALNL--ATIQWNVLRSSMPFGADKVIPAYGLYAGIIFGIMGLSAAPPVRKWCYELFYVIHRGGFFVGIVLVCLHAKAIWLALAAPLGLYVATLVVLRTRAFWQRFQGHV-MTTTSSTVLFELQASK--------QTKRWLDNLAPCAYFYVCIPSISR-------------------TEWHPFSAI-VSPHTGHLAFCVKSRGPGTFTDQLVQLAHND--PVFDVLVGGPYGRPSLRFRDYEHVLLFAGGIGITPM 565
BLAST of NO28G01310 vs. NCBI_GenBank
Match: OQR89421.1 (transmembrane protein [Achlya hypogyna]) HSP 1 Score: 94.0 bits (232), Expect = 3.200e-15 Identity = 118/469 (25.16%), Postives = 194/469 (41.36%), Query Frame = 0 Query: 454 ILWARGGREGAGAWPAMHAASGSVDVNWKADAG-----GAVTKAVQSHEPIMIPGVILLLLPLXXXXXXXXXXXXXXXXXXXXXXXXLGRLLLQRRLWKGMKGDSLVAKTITSAGAFRWGEVMVQAFVL--LALIGLGVHWYLWGQALGWSQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPLLWRAS-PSSPVAAAFGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYC-SFKTW---RSTKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLPXXXXXXXXXXXXXXXXXXXXXFIETWHPYSACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQ---QRPPCPRVMVDGPYGRCSLSLPCYSHLLLLGGGVGITPLSSTL 908 ILWA G R A+P+ H A+G + A G A+ AV ++ +++ G + ++ L R L Q+ L ++L+A SA + GE+ V A + L L+ L V Q + A S+ +G + + LML+ LP ++ W + + ER + FHRALG +V +++HL I+ + R + V +G +++ + L AL VRRR ++LF H I+A + A LH + + F P+ + F L RA+C SF T ++L TK P A ++ + +P WHP+SA + D + F +K ++ V A + Q RV V GPYG+ ++ + Y H++L+ GG+G+TP+ S L Sbjct: 154 ILWAHGTR----AFPSYHDAAGVARIVLSATTGPAQVLSALPSAVTTYTTLIVAGAFVTMVLLGLVATHTGEW----------------RSLNQKTLCAPPMSNNLLAGLTQSAADTKCGELAVVAVYVATLVLVALSVK----SQFTNATAMGALSLITGHLALVDLMLLLLPVARGKHWELVFGISHERILKFHRALGRSCVVYSTVHLVINATAGGVSSRQPYGTQQVVPLYGFVSFVAFASMGLLALEPVRRRWYELFYYYHRIAAVVGIVFAMLHSRTVVYAMIF--PVAIYGLSGLFRL--RAFCNSFDATIDVHGTNTVTLVLPSTAQTKRWAATMNPCA------FFWVCVPSVS-------------------ATEWHPFSAI-VTPDQDSIGFCMKAPSKGSFVDGVFQAATKALYQDASTLRVRVGGPYGKPAVDVAAYDHVVLVAGGIGVTPMLSLL 568
BLAST of NO28G01310 vs. NCBI_GenBank
Match: XP_016605328.1 (hypothetical protein SPPG_07217 [Spizellomyces punctatus DAOM BR117] >KNC97288.1 hypothetical protein SPPG_07217 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 93.2 bits (230), Expect = 5.400e-15 Identity = 93/333 (27.93%), Postives = 144/333 (43.24%), Query Frame = 0 Query: 607 GLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPLLWRASPSSPV------AAAFGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWRSTKLMSLEAKEGGVTKLVVRVEAPL--AHTQPGQYYLLSLPXXXXXXXXXXXXXXXXXXXXXFIETWHPYS-------------ACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCPRVMVDGPYGRCSLSLPCYSHLLLLGGGVGITPLSSTLAWLRKRGRKGG 919 G + + L T+ A + P L LPFER I FH+ G +V A +H G+ + Q W A + + AFG A + FV L+A +RRR ++LF A+H ++++L H T +G F + PPL + +DR + W + G VT+LVV + PL Q GQY L++P IE WHP S A G T+ + L+ R +++ R+ + Q +V +DGPYG+ L Y+ ++L+ GG+G TP+ S L + ++ K G Sbjct: 115 GYMALANLCAATIFALRNSPAYYLLALPFERTIEFHKWFGIGAMVFAWVHGGLYLRQ----WEAQDVTALMFNMRSRLAFGAAVAALVAFVVLAAQRPIRRRMWELFWAIHIFGFLAIFVLVNFH---TTKGFEFTL------PPLLLWGLDRVIRFTRGWLRPAVAETSDCNGQVTRLVVH-QNPLWGRAYQAGQYVFLNVP------------------RAGMIE-WHPASIVSGAPLKNDLEGADGAFPPTQNQYTLVL-RNVGSFTRRLTQVGASQEK--LKVRIDGPYGKWDLVAKNYNLIVLVAGGIGATPILSVLLTVLRKSSKTG 411
BLAST of NO28G01310 vs. NCBI_GenBank
Match: OQR91852.1 (transmembrane protein [Thraustotheca clavata]) HSP 1 Score: 93.2 bits (230), Expect = 5.400e-15 Identity = 83/344 (24.13%), Postives = 158/344 (45.93%), Query Frame = 0 Query: 565 FRWGEVMVQAFVLLALIGLGVHWYLWGQALGWSQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPL-LWRASPSSPVAAAFGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWRSTKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLPXXXXXXXXXXXXXXXXXXXXXFIETWHPYSACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCPRVMVDGPYGRCSLSLPCYSHLLLLGGGVGITPLSSTL 908 F+ GE +V A + L+ +GV + Q G + R S+ +G T+ LML+ LP ++ W + + ER + FHRALG L +V A IHL ++ + + + A + V +G A++ + L A++ +RRR +++F H + A + A LH + G+ F P++ + + L RA+ F +++ + E + + + P ++ + +P WHP+SA + + + F +K + +++ ++ A ++VDGPYG S+ + Y H++L+ GG+G+TP+ S + Sbjct: 246 FKIGEAIVAAVYIATLVVVGVS--IQHQFDGATANRMTSLITGHFTMVNLMLLLLPVARGKHWEVVFGISHERILKFHRALGRLCVVFAIIHLIVNAVKINVTIKEAYGTQEVIPLYGFLAFLAFASMGLIAIDPIRRRFYEVFYYYHRVMAVVGIVFAMLHSKTVVYGMIF--PLVIYGLSAIYRL--RAF--FNAYKANFEIQGEDNINFILPSTAQTKHWAKTMNPCSFFWVCVPSVSKL-------------------EWHPFSAIVNPEQD-TIGFCMKAKTKGSFTDKLIQAARASDGSELTLLVDGPYGNPSVDIAKYDHIVLICGGIGVTPMLSLM 561
BLAST of NO28G01310 vs. NCBI_GenBank
Match: ETK94059.1 (hypothetical protein L915_02837, partial [Phytophthora parasitica]) HSP 1 Score: 92.0 bits (227), Expect = 1.200e-14 Identity = 90/348 (25.86%), Postives = 141/348 (40.52%), Query Frame = 0 Query: 588 YLWGQALGWSQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPLLWRASPSSPVAAA---------FGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWRSTKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLP-----XXXXXXXXXXXXXXXXXXXXXFIETWHPYSACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCP-RVMVDGPYGRCSLSLP---CYSHLLLLGGGVGITPLSSTLAWLRKRGRKG 918 +L G A+ ++ S T T+L + L + L +PFERA+ +H+ L + T+V +H + A+P V A G A++ L + L ++N +RRR F+ F H+I + A LH G P+ IL P F ++ R + + L E G V + V V HT PG L+ P ++E WHP++ S + + F K G W+ +VR A P +++DGPYG S+ + YSH +L GG+G+TP+ S + WL R+G Sbjct: 96 FLLGMAVFFTVEHEVKTSGAPATFTMLFVFVLVVRNNSVLLALTGIPFERALFYHKLLSYATIVLTVVH--------AYAYYAAPDEHVQTADEDMDFKLLTGYVAFVALVVLCLLSVNKIRRRFFEFFLRTHWILFIVAVVFASLH------GAPY---ILVGVIPWFVDMLYRLAIRTRKYSKGSLKPTEVSTGIVARDQVSV-----HTLPGDITLIQFPRVRKDTGDAFEYEAGQYAFICIPTISYLE-WHPFT-ISSSPNEAMVTFHTKKLG--DWTKKVRTAAIDTNNDSPFDILLDGPYGNVSVDIATPGVYSHYVLFSGGIGVTPMRSIVNWLYTEHREG 417
BLAST of NO28G01310 vs. NCBI_GenBank
Match: XP_008612731.1 (hypothetical protein SDRG_08617 [Saprolegnia diclina VS20] >EQC33936.1 hypothetical protein SDRG_08617 [Saprolegnia diclina VS20]) HSP 1 Score: 91.7 bits (226), Expect = 1.600e-14 Identity = 92/317 (29.02%), Postives = 136/317 (42.90%), Query Frame = 0 Query: 597 SQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPLLWRASPS------SPVAAAFGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWRSTKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLPXXXXXXXXXXXXXXXXXXXXXFIETWHPYSACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCPRVMVDGPYGRCSLSLPCYSHLLLLGGGVGITPLSSTL 908 S RAASV G ++ L + LP+++ G W L + R + FH+ LG L LV+ H +++ A L W S V A+GL A + + L AL VR+R F+LF +H + + + LH A + L P++ + L + F + S E TKL L P Y+ L +P WHP+SA S T + F +K R P +++ RV LA ++ V+V GPYGR S+ L Y +LL GG+GITP++ L Sbjct: 287 SGGRAASVIFGHLSTLHLAFLLLPSARGGHWGFLFGVTHTRLVTFHKWLGSLFLVSLLGHFVLNV--ATLDWSVLSSLQPFGAQKVLPAYGLYAGLVFVLMGLLALPFVRQRTFELFYFVHRLGSLLGIVFVCLHATAIWQAL--VAPLVLYLATLVAIRSRAFWQRFSAHVTATTSSTVLLELPSTKLSNAWHQQLG---PCTYFYLCVPSVSRV-------------------EWHPFSAM-TSPHTGHVAFCMKSRSPGSFTDRVLDLARKE--TTLDVLVGGPYGRPSVDLALYDRVLLFAGGIGITPMAHIL 574
BLAST of NO28G01310 vs. NCBI_GenBank
Match: XP_008614181.1 (hypothetical protein SDRG_09990 [Saprolegnia diclina VS20] >EQC32240.1 hypothetical protein SDRG_09990 [Saprolegnia diclina VS20]) HSP 1 Score: 91.3 bits (225), Expect = 2.100e-14 Identity = 86/323 (26.63%), Postives = 141/323 (43.65%), Query Frame = 0 Query: 595 GWSQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPLLWRASPSSP-----VAAAFGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWR----STKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLPXXXXXXXXXXXXXXXXXXXXXFIETWHPYSACG-DSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCPRVMVDGPYGRCSLSLPCYSHLLLLGGGVGITPLSSTL 908 G S R AS+ +G + LML+ LP ++ W + + ERA++FHR LG L ++ + +HL ++ R + S+P V +G A++ L + L AL +RR +++F H ++A L + LH G+ F P++ + + L C T R ST +SL + + PG ++ +++P WHPYSA + DT + F IK ++ +V A + V V GPYGR ++ L Y H +L+ GG+GITP+ + L Sbjct: 279 GASADRIASLVTGHFALVHLMLLLLPVARGQHWTLIFGIGPERALLFHRMLGRLVVLLSIVHLILNARNV----RVTSSTPYGTQQVVPLYGFVAFLALTSLGLVALWAIRRHCYEVFLYYHRVAAVVGILFSMLHSHTVAIGMAF--PLIIYGLSGLYRLGAYRQCFDATARVTGPSTVTLSLPS--------TPQTMHWATRMSPGSFFYVNVPSISRL-------------------EWHPYSAVATPTSDT--IGFCIKAPHANSFGHKVYTAAMENASLA--VYVGGPYGRFTVDLASYEHAILICGGIGITPMLNVL 564
BLAST of NO28G01310 vs. NCBI_GenBank
Match: ETP24003.1 (hypothetical protein F441_02949 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 91.3 bits (225), Expect = 2.100e-14 Identity = 89/348 (25.57%), Postives = 141/348 (40.52%), Query Frame = 0 Query: 588 YLWGQALGWSQARAASVSSGLITITLLMLVTLPASKTGPWVRLCRLPFERAIVFHRALGHLTLVAASIHLGISIDQAPLLWRASPSSPVAAA---------FGLAAYICLCFVALSALNVVRRRAFDLFKALHYISAFSVYLLAFLHLPATIEGLPFYVPILYFSPPLFFFLIDRAYCSFKTWRSTKLMSLEAKEGGVTKLVVRVEAPLAHTQPGQYYLLSLP-----XXXXXXXXXXXXXXXXXXXXXFIETWHPYSACGDSDDTRKLHFLIKDRGPRTWSGRVRALAEQQRPPCP-RVMVDGPYGRCSLSLP---CYSHLLLLGGGVGITPLSSTLAWLRKRGRKG 918 +L G A+ ++ S T T+L + L + L +PFERA+ +H+ L + T+V +H + A+P V A G A++ + + L ++N +RRR F+ F H+I + A LH G P+ IL P F ++ R + + L E G V + V V HT PG L+ P ++E WHP++ S + + F K G W+ +VR A P +++DGPYG S+ + YSH +L GG+G+TP+ S + WL R+G Sbjct: 96 FLLGMAVFFTVEHEVKTSGAPATFTMLFVFVLVVRNNSVLLALTGIPFERALFYHKLLSYATIVLTVVH--------AYAYYAAPDEHVQTADEDMDFKLLTGYVAFVAMVVLCLLSVNKIRRRFFEFFLRTHWILFIVAVVFASLH------GAPY---ILVGVIPWFVDMLYRLAIRTRKYSKGSLKPTEVSTGIVARDQVSV-----HTLPGDITLIQFPRVRKDTGDAFEYEAGQYAFICIPTISYLE-WHPFT-ISSSPNEAMVTFHTKKLG--DWTKKVRTAAIDTNNDSPFDILLDGPYGNVSVDIATPGVYSHYVLFSGGIGVTPMRSIVNWLYTEHREG 417 The following BLAST results are available for this feature:
BLAST of NO28G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01310 ID=NO28G01310|Name=NO28G01310|organism=Nannochloropsis oceanica|type=gene|length=6134bpback to top protein sequence of NO28G01310.1 >NO28G01310.1-protein ID=NO28G01310.1-protein|Name=NO28G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1106bpback to top Synonyms
Publications
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