NO28G01220.1, NO28G01220.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G01220.1
Unique Name	NO28G01220.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4176
Alignment location	chr28:379910..384873 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:379910..384873 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO28G01220.1 vs.
Match: EWM20869.1 (hypothetical protein Naga_100787g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 229.2 bits (583), Expect = 4.200e-56
Identity = 181/330 (54.85%), Postives = 203/330 (61.52%), Query Frame = 0

Query:    7 SMSMPPSSFSCPPS----SYASSSGRKRRLL----LSALSFRQSLSVAPGGGGGGGGGGRGIEAASAAATAATATTHKAAARKRRDAPLLLSTFPLLLALLLLPTFLPPSTIS--VLAFHNAPLATPGL-----PARHRSILPSRANTVAPSVPRPRPRLQRGPAPLQFSPAFLNVGTPEVVLILLVGYFVLGPQDLYRVAKETGQLVNNVQTAGTDAWKVFQEAMEAEGTMAAMGASVNEINNVRQNFFSKFLDVRAERTLDQLEEKGMDVEALTEGMGEEDEWGSRLKEVRRRKEEEREEEEQRAAMEKDDKRRRRKRRRSRTEGGRR 322
            S S PP   S  PS    S+  + GR RR       S  S   S + APG G       R   +      A  A        +R         FPLLL L LL T L  S       AF NAPL +  +     PARH  I+   +   AP+      R  R   PL FSPA LNVGTPE  LILLVGYFVLGPQDLYRVAKE GQL++N+QTAG+DAWKVFQEAMEAEGTMAAMGASVNEINNVRQNFF KFLDVRAERTLDQLEEKG+DVEALT GMGEEDEWG+RLKEV+RRKE   EE   +  ME +D+ R+RKRRR +   GRR
Sbjct:    2 SSSAPPGPTSLVPSPLSLSFTPAGGRSRRSCGRRSFSICSSSLSRTTAPGLGILQRRTRRAWSSICLRLLARHAQDGHHPLPRRFCPCFPHLAFPLLLLLCLLCTHLSTSKPHQHASAFLNAPLHSQHVTRLSTPARHGPIISPLS---APARRHAPLRRSRPLPPLFFSPALLNVGTPEAALILLVGYFVLGPQDLYRVAKEVGQLLSNLQTAGSDAWKVFQEAMEAEGTMAAMGASVNEINNVRQNFFQKFLDVRAERTLDQLEEKGVDVEALTGGMGEEDEWGNRLKEVQRRKE---EEAAAKVLMEAEDEGRKRKRRRRK---GRR 322

The following BLAST results are available for this feature:

BLAST of NO28G01220.1 vs.

BLAST of NO28G01220.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20869.1	4.200e-56	54.85	hypothetical protein Naga_100787g1, partial [Nanno...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO28G01220	NO28G01220	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO28G01220.1	NO28G01220.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO28G01220.1.cds1	NO28G01220.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01220.1.cds2	NO28G01220.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01220.1.cds3	NO28G01220.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01220.1.cds4	NO28G01220.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr28:379910..384873-
coding sequence from alignment at chr28:379910..384873-

mRNA sequence

>NO28G01220.1 ID=NO28G01220.1|Name=NO28G01220.1|organism=Nannochloropsis oceanica|type=mRNA|length=4176bp
GGATTGGATACCTCCTATGATATTCAGCGCCGGCCCCTGTCCGCACGCGG
ATCCATGAAGATTAGAAGTGGTCCCGTTTTAGATGCTGCTGGCTTGAGCG
AGGGATTGGGCTTTGGCTTGAGCTGCGGCCTGGGCTGTCCACTTTGGTGT
GTGAAGCGGCCCCGAGCAAGACGATGGAACCAAGCTCGATGTGGTGGAAT
AAAATCACGAAGTTCGAAACATTTTGGTCACTTTTTGAAATGGAAATGGC
ATGAGAGAGTATCGCTTACCCTCCGTTGTCCCAATGTACCGCATCCCTCT
GCCAATCTAATGAAAGCTGCGGAGGCGACGAAAGTATGAAGAAACCCGAC
ATTCCCTCCTATATATCGTCATGGCATGCCCGGCAGTAGATCCTCATCTT
CACACATGCGAGCTTAAAGGAAAAAAACAGAAACGTGCAAACGACGGTGA
AAAGGAACGAAATGACGAGAATAAAGCGATGGAACGGGGAACTTGAAACA
AAGTACGTTTTGAATACGTTTTCGTTTCGGGTTGTAAATGTAAGACTAAG
ACATTTTCAAAGTACGACCGATACTCCATTCCCCGAGTCCAATTTATTGC
CTCCTTCAAGCTTGCTGATGAAAGCGCCAGGAAAGAGGGAAGTCTGTGCC
TCGTCACGTCCTATCTCCTGTAGTGGGTCCGGAGAGAAGATAATGAATCA
TAAGTCCTTTTATTTTTCAGTGATATCGCATGAGTCTCATCCGCTGGCTT
TTTACCCCATCTCTCCCTCCCTCGACATTCCTTTCCTTCCTCTACTCCTC
CATCTCTTTCTTTCTACGTAAACACAAGTAAGAACGCCGTGGCGTGCGTC
TGAGAGACAAAATATATCTGTACACACGTATGTAATAAATTATACATTAA
ATATATATATATATATATATACATCATATATATACATCAGCAGTGTGCAT
CATAGTTTAATTAAAAAGAGTCCCCACAGAGTAAGCTACTCGGATGGTTG
ATTCATAAATGTTCTAATCCTCTGCAATGCTTGTGGTAGTTGTGGCGCTG
CTGCTGGCGGTGCTAGTACTGGTGTTGATAGCGGCAAGATAAATTTATTC
ACGGCACACATACCACGCATGGACGTACCTTCAGAGCCGGGGGTTTGGAT
GACATGTTGCCAGCCGTCTGTCTCTTGATGCTGCACACCCATCCACTGCT
GCTTCCTGCCACGAGCTGGCTGCTCTGTCGTAGCATGCTGCCACCGTTGG
AAAAAAGGTGGTGATGGTTGATGTGCCCGTAGCCGTCTTCGTCGGGAAAG
AGATCGCGTGGCTAAGCAGGACTGGGGTCTCCCTACCCCACGTTTTTCGT
CTTGGCTTGCCTTGGTCCTATCGCACGCACATCACCCGATTTGAAGGCCA
CGAATCCCATTATGTCATCGTCCAGCTCCACTGCTTGTATTCATGGTGCT
ATCATCGTCTTTGGCGGCTCGTGGTCGTTTTTCAAGGCGTTCTTTTATAG
ATCGTGCACTGGAGCACCAATGCATGCAAAGCTGATGATATCCTCGCGAT
TTCGTGATGACTTTCGCCCTGCAGGTGTACAGCAACTTCCCTTTGCCATG
TCTTGTCCGCACGCAAACTCACAGCTACCTCACACGACTCCTCCAAGTCT
TGCACAGCCTAAGTTTCGACTACAAGGCGGAAGCTCGTGCGTGCTGACGC
GGTGGAGACGCTCGGGATCCTGACCTGAAGCTCGGCCGATTCAGCCATTC
CACCATTCAATCGATCGATCGTGCCTCACCTAGCCCTGTGCGCTGGCTGC
TAGGATATGACCAACACTTGCACCAGCATGAGCATGCCTCCCTCTTCATT
TTCCTGTCCTCCTTCCTCTTATGCTTCGTCATCGGGCAGAAAAAGAAGAC
TCCTCCTCTCGGCGCTATCATTTCGACAGTCACTGTCTGTAGCACCAGGA
GGAGGAGGGGGAGGAGGAGGAGGAGGACGAGGTATTGAAGCAGCGTCTGC
TGCAGCAACAGCAGCAACAGCAACAACACATAAAGCGGCAGCAAGAAAGC
GTCGTGATGCACCCCTCCTCCTGTCCACCTTCCCCCTCCTCCTTGCCCTC
CTCCTCCTCCCTACCTTCCTCCCTCCAAGCACCATCAGTGTCCTCGCCTT
TCATAATGCTCCGCTCGCCACGCCGGGTTTACCTGCACGACACCGATCCA
TCCTCCCCTCCAGAGCCAACACGGTCGCCCCTTCTGTTCCTCGCCCTCGA
CCTCGCTTGCAACGAGGACCTGCCCCTCTCCAGTTTAGCCCTGCTTTTCT
GAATGTAGGCACGCCGGAGGTAGTTTTGATTTTATTGGTCGGATACTTTG
TGCTAGGGCCTCAGGATTTATACAGGGTGGCTAAGGAGACCGGTCAGCTG
GTGAATAATGTGCAGACTGCAGGCACCGATGCTTGGAAGGTTTTTCAAGA
GGCGATGGAAGCGGAGGGAACGATGGCCGCCATGGGCGCAAGCGTCAACG
AGATCAACAATGTACGGCAAAACTTTTTCTCTAAGTTCCTGGATGTGCGG
GCCGAGCGCACTCTTGATCAGCTCGAGGAGAAAGGGATGGACGTGGAGGC
CCTGACGGAAGGGATGGGGGAGGAAGATGAGTGGGGAAGCAGGCTCAAGG
AAGTACGAAGGAGGAAGGAGGAAGAGAGGGAGGAAGAGGAGCAAAGGGCA
GCGATGGAAAAAGACGATAAGAGGAGGAGGAGGAAGAGGAGGAGGAGCCG
GACAGAAGGAGGGAGGAGGTTGCAGGGGTGGGAGAGCGACGAGGAGGAGG
ACCGATACCTGGTCAGTAGGGAGGGCGGGATGAATGAGAGAATGGGGAGT
CGCCGTCGTTCTCCTCCTTCTCCGAGTCGTCGTCGACGACTTCCTCCTCC
GCCTCCTTCCCCCTACGGGGGGCCCCCTTTTCCTTTTCCTTATCCCAGCC
CCGCACAATCAAGAGCAAGGGGCTACCCTCCCCCTCCTTATCCTTATCAT
TACGCTTACCCTCCTACTCCTCCTGCTGCTGCTACTACTAGTACTGATGG
CAGTACTGCTGAAAGAGCGGTGAATACTACTGCAACCATAGGCACCCGTT
TTCCTCCTTCTTTCTTCCCCCCTCCTCCTCCTCCATTTTACTACGCACCA
CCAGCACCACCAGCAACAGTAGCACAATCAGGAACAGCAGGAATAGCTGC
AAATAAGTCAGCAACTGAGGAGAGCAGCAGCCCCAGCACCACCACCACCA
GCGCCCCTCCTCCTCAACGAGGCTGGTATCCTTCCCCTCCTCCCTACATG
TATCGCCCTCCTCCCTACTTCACCCCCACTCCCCCTCCTGCGTCTTCCTC
TTCCTCCCCTTCCTTTCCTTATTCCTCGTCCTCTTCTCCCTCTTCTTCGT
CATGGCCATACCCGGCCCAGCCGCCTTCCCCGTATGCATCTCTCTCGACG
AAGGGAGGAGTAGAAAAGGGCGAGGCCAGCGAAGATGCAAAAACAGCTCC
TGCCGCAGCGATCTCATCAGTGGCAGCAGGAGCAGGAGTAGGAAAAGCAG
CCTACCCCCCCTACATGATGATGCCTCCTTCACCCTATGGCATGTATCCT
CCGCCTTTTTCTCCCTACTCCCCATACCCCCCCTACCCTCCTTACCCTTC
TCGCCCTTCCTCTTCTTCTCGTCGGCGTTCTTCTTCATCGTCGTCCGGGC
GGCGTCCACGCAGAAGCAGCAGGATTAGGAGCAGTAGTGGCTCAGACAGA
GATAAAAAGAGTAAGAGTAGCAATATCAACTCTTCCTCCCTCCCTCCCTT
GCCCCTGACACCTCAAGAGGAGGCGGAAGCCGCAAGGAGATTTTCAGATC
AATTGAATATCGACGCATGGAATGAGAAAATTATGAAAGCTAAGGGAAAT
GGAGCGAACATGCCTTTAGCGCCATTGGAAGACCAGGGGGGCAAGGAAAG
AAGTAAAACGAGTCGATGGAGGGAAGAGACGCGGCGTGGGAGGAGGGGAT
GACTTAAAGAAATCCACGAATTTGAAAAACGCGTTAACAATGGGTAGATA
CGGAGAGGCAGATGCCCACGCACAACTTAGAGATTTCTTCAACTTTCCTT
GCTCACCGTCTTTGAAATGAAGTCACTAGAGGGCGAAAACACGAGAAAGA
ACGTCCAAGGAAGAGAAGCAAGATAG

protein sequence of NO28G01220.1

>NO28G01220.1-protein ID=NO28G01220.1-protein|Name=NO28G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=732bp
MTNTCTSMSMPPSSFSCPPSSYASSSGRKRRLLLSALSFRQSLSVAPGGG
GGGGGGGRGIEAASAAATAATATTHKAAARKRRDAPLLLSTFPLLLALLL
LPTFLPPSTISVLAFHNAPLATPGLPARHRSILPSRANTVAPSVPRPRPR
LQRGPAPLQFSPAFLNVGTPEVVLILLVGYFVLGPQDLYRVAKETGQLVN
NVQTAGTDAWKVFQEAMEAEGTMAAMGASVNEINNVRQNFFSKFLDVRAE
RTLDQLEEKGMDVEALTEGMGEEDEWGSRLKEVRRRKEEEREEEEQRAAM
EKDDKRRRRKRRRSRTEGGRRLQGWESDEEEDRYLVSREGGMNERMGSRR
RSPPSPSRRRRLPPPPPSPYGGPPFPFPYPSPAQSRARGYPPPPYPYHYA
YPPTPPAAATTSTDGSTAERAVNTTATIGTRFPPSFFPPPPPPFYYAPPA
PPATVAQSGTAGIAANKSATEESSSPSTTTTSAPPPQRGWYPSPPPYMYR
PPPYFTPTPPPASSSSSPSFPYSSSSSPSSSSWPYPAQPPSPYASLSTKG
GVEKGEASEDAKTAPAAAISSVAAGAGVGKAAYPPYMMMPPSPYGMYPPP
FSPYSPYPPYPPYPSRPSSSSRRRSSSSSSGRRPRRSSRIRSSSGSDRDK
KSKSSNINSSSLPPLPLTPQEEAEAARRFSDQLNIDAWNEKIMKAKGNGA
NMPLAPLEDQGGKERSKTSRWREETRRGRRG*

mRNA from alignment at chr28:379910..384873-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO28G01220.1 ID=NO28G01220.1|Name=NO28G01220.1|organism=Nannochloropsis oceanica|type=mRNA|length=4964bp|location=Sequence derived from alignment at chr28:379910..384873- (Nannochloropsis oceanica)
GGATTGGATACCTCCTATGATATTCAGCGCCGGCCCCTGTCCGCACGCGG
ATCCATGAAGATTAGAAGTGGTCCCGTTTTAGATGCTGCTGGCTTGAGCG
AGGGATTGGGCTTTGGCTTGAGCTGCGGCCTGGGCTGTCCACTTTGGTGT
GTGAAGCGGCCCCGAGCAAGACGATGGAACCAAGCTCGATGTGGTGGAAT
AAAATCACGAAGTTCGAAACATTTTGGTCACTTTTTGAAATGGAAATGGC
ATGAGAGAGTATCGCTTACCCTCCGTTGTCCCAATGTACCGCATCCCTCT
GCCAATCTAATGAAAGCTGCGGAGGCGACGAAAGTATGAAGAAACCCGAC
ATTCCCTCCTATATATCGTCATGGCATGCCCGGCAGTAGATCCTCATCTT
CACACATGCGAGCTTAAAGGAAAAAAACAGAAACGTGCAAACGACGGTGA
AAAGGAACGAAATGACGAGAATAAAGCGATGGAACGGGGAACTTGAAACA
AAGTACGTTTTGAATACGTTTTCGTTTCGGGTTGTAAATGTAAGACTAAG
ACATTTTCAAAGTACGACCGATACTCCATTCCCCGAGTCCAATTTATTGC
CTCCTTCAAGCTTGCTGATGAAAGCGCCAGGAAAGAGGGAAGTCTGTGCC
TCGTCACGTCCTATCTCCTGTAGTGGGTCCGGAGAGAAGATAATGAATCA
TAAGTCCTTTTATTTTTCAGTGATATCGCATGAGTCTCATCCGCTGGCTT
TTTACCCCATCTCTCCCTCCCTCGACATTCCTTTCCTTCCTCTACTCCTC
CATCTCTTTCTTTCTACGTAAACACAAGTAAGAACGCCGTGGCGTGCGTC
TGAGAGACAAAATATATCTGTACACACGTATGTAATAAATTATACATTAA
ATATATATATATATATATATACATCATATATATACATCAGCAGTGTGCAT
CATAGTTTAATTAAAAAGAGTCCCCACAGAGTAAGCTACTCGGATGGTTG
ATTCATAAATGTTCTAATCCTCTGCAATGCTTGTGGTAGTTGTGGCGCTG
CTGCTGGCGGTGCTAGTACTGGTGTTGATAGCGGCAAGATAAATTTATTC
ACGGCACACATACCACGCATGGACGTACCTTCAGAGCCGGGGGTTTGGAT
GACATGTTGCCAGCCGTCTGTCTCTTGATGCTGCACACCCATCCACTGCT
GCTTCCTGCCACGAGCTGGCTGCTCTGTCGTAGCATGCTGCCACCGTTGG
AAAAAAGGTGGTGATGGTTGATGTGCCCGTAGCCGTCTTCGTCGGGAAAG
AGATCGCGTGGCTAAGCAGGACTGGGGTCTCCCTACCCCACGTTTTTCGT
CTTGGCTTGCCTTGGTCCTATCGCACGCACATCACCCGATTTGAAGGCCA
CGAATCCCATTATGTCATCGTCCAGCTCCACTGCTTGTATTCATGGTGCT
ATCATCGTCTTTGGCGGCTCGTGGTCGTTTTTCAAGGCGTTCTTTTATAG
ATCGTGCACTGGAGCACCAATGCATGCAAAGCTGATGATATCCTCGCGAT
TTCGTGATGACTTTCGCCCTGCAGGTGTACAGCAACTTCCCTTTGCCATG
TCTTGTCCGCACGCAAACTCACAGCTACCTCACACGACTCCTCCAAGTCT
TGCACAGCCTAAGTTTCGACTACAAGGCGGAAGCTCGTGCGTGCTGACGC
GGTGGAGACGCTCGGGATCCTGACCTGAAGCTCGGCCGATTCAGCCATTC
CACCATTCAATCGATCGATCGTGCCTCACCTAGCCCTGTGCGCTGGCTGC
TAGGATATGACCAACACTTGCACCAGCATGAGCATGCCTCCCTCTTCATT
TTCCTGTCCTCCTTCCTCTTATGCTTCGTCATCGGGCAGAAAAAGAAGAC
TCCTCCTCTCGGCGCTATCATTTCGACAGTCACTGTCTGTAGCACCAGGA
GGAGGAGGGGGAGGAGGAGGAGGAGGACGAGGTATTGAAGCAGCGTCTGC
TGCAGCAACAGCAGCAACAGCAACAACACATAAAGCGGCAGCAAGAAAGC
GTCGTGATGCACCCCTCCTCCTGTCCACCTTCCCCCTCCTCCTTGCCCTC
CTCCTCCTCCCTACCTTCCTCCCTCCAAGCACCATCAGTGTCCTCGCCTT
TCATAATGCTCCGCTCGCCACGCCGGGTTTACCTGCACGGTAAGCCCCTC
CCTCTTTTTCTACCCCCCTCTACTCCTGTCTCCAGGCCCCCTTTTCTTCT
CTGTTAATTTCTTCCTCCTGCCAACGTTGTGCACATACTCTCTATTCCCT
TTCTCCCTCCCTACCCCCTTCCCTCCCTCCCCCCCTCGCTTTCTTTCCAG
CCGCCACTGGTATAGCACCCTCTATCTCAACCCGCAGCAGGTTCCTCTAC
TTCTCTTTCCTCCACTCTCCCATTTCCCTCGTATTCATCTTACAGCCTCT
GTAGCTCACTCATGATACTCTTGATGTTGGCATCCAGAAACGGTGTTTAT
TTTTTAATTTGTCGTCGGTTAATTCCTACTCTTCCTCCCCTCCTCCCCTC
TTTCCTCCAGACACCGATCCATCCTCCCCTCCAGAGCCAACACGGTCGCC
CCTTCTGTTCCTCGCCCTCGACCTCGCTTGCAACGAGGACCTGCCCCTCT
CCAGTTTAGCCCTGCTTTTCTGAATGTAGGCACGCCGGAGGTAGTTTTGA
TTTTATTGGTCGGATACTTTGTGCTAGGGCCTCAGGATTTATACAGGGTG
GCTAAGGAGACCGGTCAGCTGGTGAATAATGTGCAGACTGCAGGCACCGA
TGCTTGGAAGGTAGGGGTCGATTAAAATACTATTATGTGTGTATGTATGA
ATGTATTGACCTTTATCTATATGTGTTAATTTGTTCCATGATATTTACAA
TTGACAGGTTTTTCAAGAGGCGATGGAAGCGGAGGGAACGATGGCCGCCA
TGGGCGCAAGCGTCAACGAGATCAACAATGTAAGGAAAAGATGTTTTAAA
TTAAAATAAATAAATAAATTAAAAGTAAGGAAAATCGTAAAATAGATAAT
AAATAATTATTTTTGGATTTATACATTTTGACGAGGAAGGACAGAAAAAG
ATGAAAGCAAAGACGTGTACTAAAAGGTTGGTTGGAGAAGATATCACCCG
CAAATAAACAGAACTATAAATAAATTTTATTTATTCATGATAACATTATT
AAATTATGAATAAATTTTCAAAAATTGATTTTGTCTATATTAATCTATGA
AAATTGATAGTTATTAACAAGCCAAATCCCCCTCACACACTCATGACAGG
TACGGCAAAACTTTTTCTCTAAGTTCCTGGATGTGCGGGCCGAGCGCACT
CTTGATCAGCTCGAGGAGAAAGGGATGGACGTGGAGGCCCTGACGGAAGG
GATGGGGGAGGAAGATGAGTGGGGAAGCAGGCTCAAGGAAGTACGAAGGA
GGAAGGAGGAAGAGAGGGAGGAAGAGGAGCAAAGGGCAGCGATGGAAAAA
GACGATAAGAGGAGGAGGAGGAAGAGGAGGAGGAGCCGGACAGAAGGAGG
GAGGAGGTTGCAGGGGTGGGAGAGCGACGAGGAGGAGGACCGATACCTGG
TCAGTAGGGAGGGCGGGATGAATGAGAGAATGGGGAGTCGCCGTCGTTCT
CCTCCTTCTCCGAGTCGTCGTCGACGACTTCCTCCTCCGCCTCCTTCCCC
CTACGGGGGGCCCCCTTTTCCTTTTCCTTATCCCAGCCCCGCACAATCAA
GAGCAAGGGGCTACCCTCCCCCTCCTTATCCTTATCATTACGCTTACCCT
CCTACTCCTCCTGCTGCTGCTACTACTAGTACTGATGGCAGTACTGCTGA
AAGAGCGGTGAATACTACTGCAACCATAGGCACCCGTTTTCCTCCTTCTT
TCTTCCCCCCTCCTCCTCCTCCATTTTACTACGCACCACCAGCACCACCA
GCAACAGTAGCACAATCAGGAACAGCAGGAATAGCTGCAAATAAGTCAGC
AACTGAGGAGAGCAGCAGCCCCAGCACCACCACCACCAGCGCCCCTCCTC
CTCAACGAGGCTGGTATCCTTCCCCTCCTCCCTACATGTATCGCCCTCCT
CCCTACTTCACCCCCACTCCCCCTCCTGCGTCTTCCTCTTCCTCCCCTTC
CTTTCCTTATTCCTCGTCCTCTTCTCCCTCTTCTTCGTCATGGCCATACC
CGGCCCAGCCGCCTTCCCCGTATGCATCTCTCTCGACGAAGGGAGGAGTA
GAAAAGGGCGAGGCCAGCGAAGATGCAAAAACAGCTCCTGCCGCAGCGAT
CTCATCAGTGGCAGCAGGAGCAGGAGTAGGAAAAGCAGCCTACCCCCCCT
ACATGATGATGCCTCCTTCACCCTATGGCATGTATCCTCCGCCTTTTTCT
CCCTACTCCCCATACCCCCCCTACCCTCCTTACCCTTCTCGCCCTTCCTC
TTCTTCTCGTCGGCGTTCTTCTTCATCGTCGTCCGGGCGGCGTCCACGCA
GAAGCAGCAGGATTAGGAGCAGTAGTGGCTCAGACAGAGATAAAAAGAGT
AAGAGTAGCAATATCAACTCTTCCTCCCTCCCTCCCTTGCCCCTGACACC
TCAAGAGGAGGCGGAAGCCGCAAGGAGATTTTCAGATCAATTGAATATCG
ACGCATGGAATGAGAAAATTATGAAAGCTAAGGGAAATGGAGCGAACATG
CCTTTAGCGCCATTGGAAGACCAGGGGGGCAAGGAAAGAAGTAAAACGAG
TCGATGGAGGGAAGAGACGCGGCGTGGGAGGAGGGGATGACTTAAAGAAA
TCCACGAATTTGAAAAACGCGTTAACAATGGGTAGATACGGAGAGGCAGA
TGCCCACGCACAACTTAGAGATTTCTTCAACTTTCCTTGCTCACCGTCTT
TGAAATGAAGTCACTAGAGGGCGAAAACACGAGAAAGAACGTCCAAGGAA
GAGAAGCAAGATAG

Coding sequence (CDS) from alignment at chr28:379910..384873-

>NO28G01220.1 ID=NO28G01220.1|Name=NO28G01220.1|organism=Nannochloropsis oceanica|type=CDS|length=2196bp|location=Sequence derived from alignment at chr28:379910..384873- (Nannochloropsis oceanica)
ATGACCAACACTTGCACCAGCATGAGCATGCCTCCCTCTTCATTTTCCTG
TCCTCCTTCCTCTTATGCTTCGTCATCGGGCAGAAAAAGAAGACTCCTCC
TCTCGGCGCTATCATTTCGACAGTCACTGTCTGTAGCACCAGGAGGAGGA
GGGGGAGGAGGAGGAGGAGGACGAGGTATTGAAGCAGCGTCTGCTGCAGC
AACAGCAGCAACAGCAACAACACATAAAGCGGCAGCAAGAAAGCGTCGTG
ATGCACCCCTCCTCCTGTCCACCTTCCCCCTCCTCCTTGCCCTCCTCCTC
CTCCCTACCTTCCTCCCTCCAAGCACCATCAGTGTCCTCGCCTTTCATAA
TGCTCCGCTCGCCACGCCGGGTTTACCTGCACGACACCGATCCATCCTCC
CCTCCAGAGCCAACACGGTCGCCCCTTCTGTTCCTCGCCCTCGACCTCGC
TTGCAACGAGGACCTGCCCCTCTCCAGTTTAGCCCTGCTTTTCTGAATGT
AGGCACGCCGGAGGTAGTTTTGATTTTATTGGTCGGATACTTTGTGCTAG
GGCCTCAGGATTTATACAGGGTGGCTAAGGAGACCGGTCAGCTGGTGAAT
AATGTGCAGACTGCAGGCACCGATGCTTGGAAGGTTTTTCAAGAGGCGAT
GGAAGCGGAGGGAACGATGGCCGCCATGGGCGCAAGCGTCAACGAGATCA
ACAATGTACGGCAAAACTTTTTCTCTAAGTTCCTGGATGTGCGGGCCGAG
CGCACTCTTGATCAGCTCGAGGAGAAAGGGATGGACGTGGAGGCCCTGAC
GGAAGGGATGGGGGAGGAAGATGAGTGGGGAAGCAGGCTCAAGGAAGTAC
GAAGGAGGAAGGAGGAAGAGAGGGAGGAAGAGGAGCAAAGGGCAGCGATG
GAAAAAGACGATAAGAGGAGGAGGAGGAAGAGGAGGAGGAGCCGGACAGA
AGGAGGGAGGAGGTTGCAGGGGTGGGAGAGCGACGAGGAGGAGGACCGAT
ACCTGGTCAGTAGGGAGGGCGGGATGAATGAGAGAATGGGGAGTCGCCGT
CGTTCTCCTCCTTCTCCGAGTCGTCGTCGACGACTTCCTCCTCCGCCTCC
TTCCCCCTACGGGGGGCCCCCTTTTCCTTTTCCTTATCCCAGCCCCGCAC
AATCAAGAGCAAGGGGCTACCCTCCCCCTCCTTATCCTTATCATTACGCT
TACCCTCCTACTCCTCCTGCTGCTGCTACTACTAGTACTGATGGCAGTAC
TGCTGAAAGAGCGGTGAATACTACTGCAACCATAGGCACCCGTTTTCCTC
CTTCTTTCTTCCCCCCTCCTCCTCCTCCATTTTACTACGCACCACCAGCA
CCACCAGCAACAGTAGCACAATCAGGAACAGCAGGAATAGCTGCAAATAA
GTCAGCAACTGAGGAGAGCAGCAGCCCCAGCACCACCACCACCAGCGCCC
CTCCTCCTCAACGAGGCTGGTATCCTTCCCCTCCTCCCTACATGTATCGC
CCTCCTCCCTACTTCACCCCCACTCCCCCTCCTGCGTCTTCCTCTTCCTC
CCCTTCCTTTCCTTATTCCTCGTCCTCTTCTCCCTCTTCTTCGTCATGGC
CATACCCGGCCCAGCCGCCTTCCCCGTATGCATCTCTCTCGACGAAGGGA
GGAGTAGAAAAGGGCGAGGCCAGCGAAGATGCAAAAACAGCTCCTGCCGC
AGCGATCTCATCAGTGGCAGCAGGAGCAGGAGTAGGAAAAGCAGCCTACC
CCCCCTACATGATGATGCCTCCTTCACCCTATGGCATGTATCCTCCGCCT
TTTTCTCCCTACTCCCCATACCCCCCCTACCCTCCTTACCCTTCTCGCCC
TTCCTCTTCTTCTCGTCGGCGTTCTTCTTCATCGTCGTCCGGGCGGCGTC
CACGCAGAAGCAGCAGGATTAGGAGCAGTAGTGGCTCAGACAGAGATAAA
AAGAGTAAGAGTAGCAATATCAACTCTTCCTCCCTCCCTCCCTTGCCCCT
GACACCTCAAGAGGAGGCGGAAGCCGCAAGGAGATTTTCAGATCAATTGA
ATATCGACGCATGGAATGAGAAAATTATGAAAGCTAAGGGAAATGGAGCG
AACATGCCTTTAGCGCCATTGGAAGACCAGGGGGGCAAGGAAAGAAGTAA
AACGAGTCGATGGAGGGAAGAGACGCGGCGTGGGAGGAGGGGATGA

Synonyms

Publications