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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr28 | genome | chr28:352486..357059 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006603 | PQ-loop_rpt |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO28G01150 vs. NCBI_GenBank
Match: EWM20880.1 (hypothetical protein Naga_101783g1 [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 2.300e-16 Identity = 61/100 (61.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query: 182 LFNAVRSSTSGAFFIKVVGSGIASLLLAVGFLPQLVLMCKTRSSQGLSLGLPLLDVTGSSLSILVLCLEAKE---EG---DDVNVGGVVPYAIIVGFQVL 276
LF A+ S+ G FI V+GSG +SLLLA+GFLPQL LM + + S G SLGL LLD+ G SLSILVLCLEA++ EG V VG V PYAIIV FQVL
Sbjct: 65 LFQALDRSSVGRSFITVIGSGGSSLLLALGFLPQLHLMWREKKSAGFSLGLSLLDLLGCSLSILVLCLEARQGAAEGGREGKVEVGSVFPYAIIVAFQVL 164
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01150 ID=NO28G01150|Name=NO28G01150|organism=Nannochloropsis oceanica|type=gene|length=4574bp
GCATTGTAAAATGCGTGCATTTTAATAATTTGGCAAGCTTAGCCTTCACT
CTTATTTTATTTTCAGATTCTTCTTATTTTTTCATTTTCGTAATTCCTCT
TCTTCTATGTTTGTATTTTGACATTCGTGGGTCAACACCACATTTATTTT
GTTTTCCGTTTAATTTGAGCTTCTGATCATTCTGTCACTCATCTATCGCA
TCTGCCATTTGGTTTTGGCGACTTCTCCTTGTTATTTCTCCCGGCTCATC
AAAATTCCCCGATTACCCGTCTTATATCACTCAATGCCTCCCTCCCTTCC
TATACATCAATCTCTCTTTCTCCACCGTCTCCTTTTCCTCTTCCTCCGCC
ACCATCTCTTCGAGAGCCCGTGCTTCCGTACCCCTCCTCCCTTTGGTGCC
TCACCGACGGCAGCCCATTCCCCTCTCTCCGTCCCTCCCTCCTTCCTCGT
CCCCGCTCCCTCTGAAAAAGTACCTCCTCCTCATCGTCCCTCCTGTCCTC
CCACCCTCCTTTTCCCTTTACCTCCTCCCCTTCCTCCATCGTCCTCCTCG
GCATTTCCAACGATGGATAATAATACAAGCCTCTCAGTCCTTCCCCCCCA
TCCTCCTCTATCTCCTCCTCCTCCTCCTCCTCCTCCATTCTGTGCCACTG
CGAGAGCTTGTCCCAGCGCCAGCCCCCCTTGGCCGACGCCAACACATTCA
CTAACAAACAAAAAAGAGTCAACCCCATGCCGAGCGCGACCACCAGAAAT
ATTATACGAGAGGTGGAAAAGGAAGGGGAGGAGGAAGGGAGGGAAGTAGG
GAGGGGGGTGGAGAGGTCGTACAGATGGACGTCGGTGAGGAACAAACTGC
TTTTTCCCTTAGTGGTGGAGGTGATGTTGATGATGGCTGTGAGCCATTTC
TCCTTCTCACCCTCCTCTCGTGCCTGCATTATCAGGTTCTCACGCTCCTT
TGCCGCCTTCTCAATTTCCTTCTCCTCCTCCTTCTTCTCCTTCTTCTTCT
CCTTCTTCTTCTCGTGCTTCTTACCTCCCTTATTGCCAAATTTCTTCCTT
TCTATGGCCTCGAGACTGAGTCGTTCTTCCTCCGAAAGAGCAGTCACGTC
GTAGCTCGCAGAATCCCAACCGTTGCCCGCCGTGCTGGGGTCCAGCGTAT
TAATGAAGACCTGCCCGACCTCCGTCCCTTGCCACGACACCGAAAACGAT
TTGAACGGCGGCAATCCTTGGTGGGAAGGTGGAGGGCCTGGTGTCACTCC
TGCTTTTGCTCCTTCTCCTGATGGTGTTCCTGCAGTTGCGCCACCACTCC
TTATATCCCCTCCTCCTCCTCCTCCTCCTCCTACTCCTGAAGAGGGCAAA
TGCAAAGACAGGGCATCCCCGGCAAACAAAAAACTCAGCCGGTACCTCCT
TCCCTCCCGCACTCTCACCGCTTGTGAAATACTGGCGGCGTCATCACTGT
TGATGTCCAAGAGTGAGGTGCAGGAGGGAGGGAGGGGGGAAGGAAGGGGC
CAGAGGGGGGGGTACCCTCTGGGGTTGGCGGCGGCGCTCTGGGCAACAGC
GGGGGCAAGGTATTGATCCACGGCACCAGAGGTGACTGGTAGGTGTGCGG
TGGTAAGAATAATGGTGAGGACCTGATTTGGGAAGAAAGGAGGAGAGAGA
GAGGGTGGGAGGGAAAGAGGGAGGGAGGAACTACCTGTCCAGGCTCCCAA
AGTGCTTCCGTTATGCCAGCGTTTGAAACCATACATGTTGAAATCTCGAA
TGTCGTTGCTCGTGACAAAACATGGGTCGTGCAGCAAATCCACGTAAGCA
GATGGTGATGGTGGAGGAGGAGGAGGGCTCGAAGAGGAGGAGGCGGCAGA
TAGGGGAAGAGGTTGGGAGGAAGGGAGCGTGGAGTGGGGGAGGAGGAAGA
GGAGGATGAGGAGGAGAAGAAGGGAGGGCAACGGCCGTGGACGCCTAGGC
ATGATTAAGGCGCTGTGTGCTTGTGGTGTGATGGATGTCACGGTAAAGTA
GGACAGTAGGATGGCCCTAGAAAAGCCCTCGCTGGTCATCTAGGACAGTC
CCAATGCCTTTTATAGATGGTCTGTCGTATGTATAAGGAGGCGGGACGCA
GGGCCACACAACCGAAGCCTCCGGGGAAACTATTATATGTTGTATGTATG
AGGAGGCGGGACGCAGGGCCACACAACCGAAGCCTCCGGGGAAACTATTA
TATGTTGATCGGGCAGGGTACGTGTCGTTGCTCCAAAATATTCCCCATCA
TCCTCCGACGGGATGTAGTATGTGTTTTTTTTTCTCCCCTTGATATGAAA
CCTTCCTCCGGCTGATGTGCTACCTGGCAATGCTCACCACTCTTTCCATT
TGTGTCTCCTCTTATTTTTGGTCGCCAGTGCTGCCTGCTTGTCCCTCCTG
AGAAGGACTCTCGGCATCTCGACGAGGCTTCACATCGCTGCTCTGCGACT
ACGTGCGTACCCCTTGACCACCCTCGGACATGACAGTGCTTAAGTGTGAA
GATGCTTTCAAGGTTATAATATGTCCAAGCCCAAATTTTTGCCCGCTTGT
TGTGTTCTTGCCGGCCTCCAATCCACGCACTTCTCTCCTCTAACGCACCC
TCTCCTCCCTCCCTTCCCCCTCCCCACCCCCAGACAGGCAACTCACACAC
ACACCAGGATCCGGATGCAGATTGCCGTGTAACAGGATTTTTTGTAGCTT
CCTTCACTCCTAGCATCAAAGgtaagcgcaatcgccgccacggatcccca
accctagctctctctcgctcacacaatgcgaagtgccaagccccactctg
tatctatttctcgctgccctttgccatgcacgcatgcacgcctctactcc
tccatatttccaaagagatatgaccccaccttaatatactctctctctgt
gcaaatttttcattccaagctgcttctgcaaaggcactcgcacataacaa
aaccaaccctcccttcccgcctcctccctccttcttcctctctccctcct
ccgtccatctctagGCTGTCCATGCCTTTGAATGCTGTCATTCAGACATG
TGGATACATAGCCATGGTCTGCTTCGCCTTGCTCCTCTTTCCACAGATCT
TCCTCAACCAAGCCCGTCGCTCTACCGAGGGCCTCTCCCTCTCCCTCGTC
CTCTTATGGCATGCCTCCGCGGTCTTGATAATCCCCTATTTATTGTACTT
AGGCGAGACCTTGCCCCTGTTGTTGCAATGGGCAGTCTTTGCCTTGGCCA
GTGTATTGTTGGAACTGCAATTTTACACGTTTCGGAAGGGGAAGGGAGGG
GAGGAGGGAGGGGAGGAACAAGAGATGGCAGTTGAAGAGCTCGAAGCTGT
TGTAGTCAAAGAGGAGGGCGATAAGTGGGAAGAAAGTATGGATCCACAAG
TCAGAAAACTGAAAACTCATGCCACCAGCGCCCCCTCCCCCTCGTCCTTC
CCCTCCTCCCCTCCCGCACCACCAACATCATCCCCCACCCCCTTCCTCCA
CCTCCTCCTCCTGGGCCTCGCCCTGCTCCTCCTCACTGTTGGCAGCGTCA
TCGCCTTGCTCTCCCTCTTCAATGCCGTCCGATCCAGCACAAGCGGCGCT
TTTTTCATCAAGGTTGTCGGGAGCGGGATCGCCTCCCTCCTGCTCGCCGT
GGGGTTCCTACCTCAACTGGTCCTCATGTGCAAGACACGCAGCAGCCAGG
GACTCTCCCTCGGTCTCCCCCTCCTTGATGTGACAGGGTCTTCCCTTTCC
ATCCTTGTCCTCTGCCTCGAGGCGAAGGAGGAAGGGGACGACGTGAATGT
GGGAGGCGTGGTCCCGTATGCGATTATTGTGGGGTTTCAGgtagggcggg
aggaagggatggagggagggagggagggaaggtgcatgggcttgtccctg
taggatctgcctggctcctcgcagttgatcctaatgctatatttgaagat
gagggaggaagaggacgatgtagctgtagatatgagaagagatacacacc
aggtggtcataataaggtgtcagataaaagagggagggagggaaagaggg
agggcagggttcactgaatgggttctcgtcttctcctcgttcttaagctc
tttctttctttgtctgcgcatgggacgcatatctgacccccttctcctcc
cctcctccttccctccttctctccttcagGTCCTGGTCATTGTCATCGCC
TTGGTCATCTTTCCTGATCCCAATCGTTTCACAAGTAACGGGTTGAGGGA
AGGCAGCTTGCAAGAGTTTTTTGGAGGAAATCATTGATGAAAAGAGCTGC
AGAAGCAGCGTTGATAGCTATATTGCTGGTGGTGGGGGTTGATATTGAGC
GCAGGAGGAGTAGGCAAGAGCGGCAGGATGGCTCAGCGGGGAACTGTGGG
AGGGGCTGAGTGTGGTGCGTCCCTTCCCTTATGTTGTATGTGAGGCACTT
GGCGAGAAGGTCCTTCGGCTTGTATCTTATTGACTGACGTACTAGTTTGC
AGAGACCCGCTAACGGGAAATTAATCGGAAATTTAGAATTAAAATTGAAG
AAAGGAAGCAATGCAAGACCCCTC back to topprotein sequence of NO28G01150.1 >NO28G01150.1-protein ID=NO28G01150.1-protein|Name=NO28G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=309bp
MPLNAVIQTCGYIAMVCFALLLFPQIFLNQARRSTEGLSLSLVLLWHASA
VLIIPYLLYLGETLPLLLQWAVFALASVLLELQFYTFRKGKGGEEGGEEQ
EMAVEELEAVVVKEEGDKWEESMDPQVRKLKTHATSAPSPSSFPSSPPAP
PTSSPTPFLHLLLLGLALLLLTVGSVIALLSLFNAVRSSTSGAFFIKVVG
SGIASLLLAVGFLPQLVLMCKTRSSQGLSLGLPLLDVTGSSLSILVLCLE
AKEEGDDVNVGGVVPYAIIVGFQVLVIVIALVIFPDPNRFTSNGLREGSL
QEFFGGNH* back to top
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