NO28G01060, NO28G01060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01060 vs. NCBI_GenBank
Match: XP_005855118.1 (brix domain containing 1 [Nannochloropsis gaditana CCMP526] >EKU21237.1 brix domain containing 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 465.7 bits (1197), Expect = 1.600e-127 Identity = 224/274 (81.75%), Postives = 251/274 (91.61%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALRKGRDE 404 KAKEPK+VE GKQALFLKGTKCP+LLQTVLRDLTKLLKPN+K LSRKNEIRPFED +SLEFL DKN+CALFCF SHSKKRP NLI+GRTYDKH+LDM+EFG SSVEGLD+ K EKKR GSKPCLVF G+GWHQD TLER+QNLFMDFFRVD+V+KVALAGIDA+TSFTA+GTDSIL+RNYHV++KKS GRVPNV+L+ MGPNFTLTVRRHQLAAPDLWRTACKQP+G KKVKNESTNV G+ +GR+HVGRQDL +M+VKR+KALRKGR E Sbjct: 55 KAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLR-PKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKALRKGRGE 327
BLAST of NO28G01060 vs. NCBI_GenBank
Match: EWM20883.1 (brix domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 454.9 bits (1169), Expect = 2.800e-124 Identity = 218/267 (81.65%), Postives = 245/267 (91.76%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKA 397 KAKEPK+VE GKQALFLKGTKCP+LLQTVLRDLTKLLKPN+K LSRKNEIRPFED +SLEFL DKN+CALFCF SHSKKRP NLI+GRTYDKH+LDM+EFG SSVEGLD+ K EKKR GSKPCLVF G+GWHQD TLER+QNLFMDFFRVD+V+KVALAGIDA+TSFTA+GTDSIL+RNYHV++KKS GRVPNV+L+ MGPNFTLTVRRHQLAAPDLWRTACKQP+G KKVKNESTNV G+ +GR+HVGRQDL +M+VKR+KA Sbjct: 55 KAKEPKLVEDGKQALFLKGTKCPQLLQTVLRDLTKLLKPNAKFLSRKNEIRPFEDVTSLEFLADKNDCALFCFGSHSKKRPQNLIMGRTYDKHLLDMVEFGVSSVEGLDAVKATEKKRCGSKPCLVFAGDGWHQDATLERIQNLFMDFFRVDEVNKVALAGIDAVTSFTAMGTDSILVRNYHVKFKKSQGRVPNVLLEAMGPNFTLTVRRHQLAAPDLWRTACKQPKGLR-PKKVKNESTNVLGETVGRVHVGRQDLTSMRVKRVKA 320
BLAST of NO28G01060 vs. NCBI_GenBank
Match: CBJ29198.1 (brix domain containing 1 [Ectocarpus siliculosus]) HSP 1 Score: 266.9 bits (681), Expect = 1.100e-67 Identity = 131/269 (48.70%), Postives = 183/269 (68.03%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALR 399 + +EP+V E K A+ +KG K + + L+D+ +L P++ M S+KN+ P ED +S EFLM KN+C+LFCF SH+KKRP+N++LGRT+D HMLDMIE G GL + KR GSKP VF GE W ++ ++QNL +DFFR V++VALAG+D TA D + +R+YH+ +++SG ++P+V L+ MGP+ L +RR AA DLW+ + K+PR +K KN S N FGDKLGRIH+GRQDL +MKV+R+KALR Sbjct: 20 RKREPQVHENAKTAIIIKGRKTSQDVTDALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCSLFCFGSHNKKRPNNVVLGRTFDGHMLDMIELGLVQYRGLGELAGL-AKRVGSKPAFVFSGEKWGREEAYRKLQNLLLDFFRGQVVNEVALAGLDHCVVCTA-AQDKVYVRHYHIGFQRSGSKIPSVDLKEMGPSLDLQIRRTSFAAKDLWKASVKKPR-VAETRKTKNVSANQFGDKLGRIHLGRQDLSSMKVRRVKALR 285
BLAST of NO28G01060 vs. NCBI_GenBank
Match: EJK64192.1 (hypothetical protein THAOC_15096 [Thalassiosira oceanica]) HSP 1 Score: 249.6 bits (636), Expect = 1.800e-62 Identity = 129/281 (45.91%), Postives = 181/281 (64.41%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDT--SSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTD--------SILIRNYHVQYKK--SGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALR 399 K E ++VEGGK +L LKG +C E + TVL+D+ + P++K+LS+ N I PF+D SLEFL KN+ +F ASH+KKRP+NL+LGRT+D+ +LDM+E G L F + KKR GSKP L FVG+ W D+ L+R+QNL +DF+R D VD + L+G+D + FTA+ I R Y+++ K+ GG P L P GP+ +RR Q A+PDLW+ A KQP+G KKK KN++TNVFG+ +GR+H+ +QD+ K+ KALR Sbjct: 31 KTTESQLVEGGKGSLLLKGIRCSESMSTVLKDMRSVQAPHAKLLSKNNLIVPFDDAGQQSLEFLTTKNDATVFAMASHNKKRPNNLVLGRTFDRRVLDMVEIGILQYRSLSDFGGLPKKRLGSKPLLQFVGDLWSSDVNLKRLQNLMIDFYRGDPVDSLVLSGLDHVIVFTAVEASVGGQEAFPMIHQRTYYMKLKRDPQGGVAPVPYLTPSGPDMDFKIRRTQFASPDLWKLAMKQPQGIKAKKK-KNQTTNVFGETIGRLHLDKQDIDNRSGKKSKALR 310
BLAST of NO28G01060 vs. NCBI_GenBank
Match: XP_002288799.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94235.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 249.2 bits (635), Expect = 2.300e-62 Identity = 129/282 (45.74%), Postives = 180/282 (63.83%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFED--TSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTAL---------GTDSILIRNYHVQYKK--SGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALR 399 K EP++VEG K AL LKG KC E + TVL+D+ + P+SK+LS+ N I PF+D SLEFL KN+ ALF ASH+KKRP+NL+LGRT+D+ +LDM+E G + F + KKR GSKP L FVG+ W D+ L+R+QNL +DF+R D VD + ++G+D + FTA I R Y+++ KK GG+ P L P GP+ +RR + A+PDLW+ A KQP KKK KN++TN+FG+ +GR+H+ +Q++ K+ KALR Sbjct: 31 KTTEPQLVEGAKNALLLKGIKCSENMSTVLKDMRSVQSPHSKLLSKNNMIVPFDDEGQQSLEFLTTKNDAALFALASHNKKRPNNLVLGRTFDRRVLDMVEIGILQYRSVGDFPGLPKKRLGSKPLLQFVGDLWQSDVNLKRLQNLLVDFYRGDPVDSLIVSGLDHVMVFTAAEASFGGQQENMPIIHQRTYYMKLKKDPKGGKAPAPYLTPSGPDMDFKIRRTKFASPDLWKLAMKQPTTNKAKKK-KNQTTNLFGETIGRLHLEKQNIDNRSGKKSKALR 311
BLAST of NO28G01060 vs. NCBI_GenBank
Match: XP_002590285.1 (hypothetical protein BRAFLDRAFT_121353 [Branchiostoma floridae] >EEN46296.1 hypothetical protein BRAFLDRAFT_121353 [Branchiostoma floridae]) HSP 1 Score: 244.6 bits (623), Expect = 5.800e-61 Identity = 124/270 (45.93%), Postives = 176/270 (65.19%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALRK 400 + + PK+ E K A+F+KG E + VL++L L KPN+ RKN +RPF+D SS+EF KN+ +LF F SHSKKRP+NL+LGR YD H+LDM+E G + + F EK G+KPCLVF GE + QD R++N+ +DFFR + V L G++ + FTAL +++R+Y V KKSG R P V L +GP L VRR +LA+ DL++ ACK+P+ +G KKVKN T+VFG K+GR+H+ RQD ++ ++MK L++ Sbjct: 21 EVRAPKLEENDKVAMFIKGGHTSETITQVLKELYLLKKPNAITFKRKNIMRPFDDQSSIEFFSQKNDSSLFLFGSHSKKRPNNLVLGRLYDHHVLDMVELGVTHFRSMQDF-PTEKIAMGTKPCLVFEGEAFEQDHKHRRLKNMLIDFFRGVKANNVRLQGLEHVLQFTAL-DGKVMVRSYKVLLKKSGSRTPRVELSEIGPALDLEVRRTRLASDDLYKKACKKPK-KGKPKKVKNVKTDVFGAKMGRVHMERQDFSKLQTRKMKGLKR 287
BLAST of NO28G01060 vs. NCBI_GenBank
Match: XP_019627838.1 (PREDICTED: ribosome production factor 2 homolog [Branchiostoma belcheri]) HSP 1 Score: 244.2 bits (622), Expect = 7.600e-61 Identity = 124/270 (45.93%), Postives = 176/270 (65.19%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALRK 400 + + PK+ E K A+F+KG E + VL++L L KPN+ RKN +RPF+D SS+EF KN+ +LF F SHSKKRP+NL+LGR YD H+LDM+E G + + F EK G+KPCLVF GE + QD R++N+ +DFFR + V L G++ + FTAL +++R+Y V KKSG R P V L +GP L VRR +LA+ DL++ ACK+P+ +G KKVKN T+VFG K+GR+H+ RQD ++ ++MK L++ Sbjct: 21 EVRAPKLEENDKVAMFIKGGHTSETITQVLKELYLLKKPNAISFKRKNIMRPFDDQSSIEFFSQKNDSSLFLFGSHSKKRPNNLVLGRLYDHHVLDMVELGVVNFRSMQDF-PTEKIAMGTKPCLVFEGEAFEQDHEHRRLKNMLIDFFRGVKANNVRLQGLEHVLQFTAL-DGKVMVRSYKVLLKKSGSRTPRVELSEIGPALDLEVRRTRLASDDLYKKACKKPK-KGKPKKVKNVKTDVFGAKMGRVHMERQDFSKLQTRKMKGLKR 287
BLAST of NO28G01060 vs. NCBI_GenBank
Match: XP_020914138.1 (ribosome production factor 2 homolog [Exaiptasia pallida] >KXJ22791.1 Ribosome production factor 2-like [Exaiptasia pallida]) HSP 1 Score: 243.8 bits (621), Expect = 9.900e-61 Identity = 125/274 (45.62%), Postives = 177/274 (64.60%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALRKGRDE 404 +AK PK VE K+ALF++G + EL+ L+DL L KPN+ M RKN + PFED +SLEF KN+ +L + SHSKKRPHNL+LGRT+D H+LD+IE G + L SF + K G+KPCL+F GE + +L +R++NL +DFFR DK+ L G++ + TA+ +L R+Y KKSGGR P V L+ MGP F T+RR +LA+ DL + A K P+ KVKN + FG K GR+H+ RQD G ++ +++K L++G+ + Sbjct: 19 EAKSPKAVENTKKALFIRGGRTSELVTQALKDLYALKKPNAVMFQRKNVLLPFEDQTSLEFFSVKNDASLIAYGSHSKKRPHNLVLGRTFDGHVLDLIELGIDRFKTLQSF-QTSKCTVGTKPCLLFSGELFETELEYKRLKNLLIDFFRGTVTDKIRLQGLEHVIQITAI-DKHVLFRSYRTILKKSGGRTPRVELEEMGPAFDFTLRRTRLASEDLMKEATKVPK-VAKPTKVKNVDYDAFGTKTGRVHMTRQDYGKLQTRKLKGLKRGQQD 289
BLAST of NO28G01060 vs. NCBI_GenBank
Match: XP_013191642.1 (PREDICTED: ribosome production factor 2 homolog [Amyelois transitella]) HSP 1 Score: 241.9 bits (616), Expect = 3.800e-60 Identity = 125/276 (45.29%), Postives = 180/276 (65.22%), Query Frame = 0 Query: 130 KAKEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPR--GEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALRKGRDE 404 +AKEPK VEG KQ LF++G E +++L+D+ KP++ L+RKN+ PFED S +E L DK E ALF SHSKKRPHN+ILGRT++ H+LDMIE G + + + F M K G KPCL+F G W + L+R++++F DFF + V+ + L G++ + SFTA I +R+Y + KKSG R P V L+ +GP+ +RR +LAA DL++ AC+ P+ GVK KN S + FG KLGRIH+G+QD+ ++ ++MK L+K +E Sbjct: 20 QAKEPKPVEGPKQCLFMQGRNPSERTRSLLKDIYDFKKPDAAYLTRKNDFVPFEDASLIEKLCDKKEAALFGVGSHSKKRPHNIILGRTFNYHILDMIELGAENFKPMSEFHNM-KVLAGLKPCLLFNGPAWDLNQDLKRLKSVFTDFFHREKVETIRLQGLEHVLSFTATEDGMIYVRSYRISLKKSGQRTPRVELEEIGPSIDFKLRRTKLAADDLYKEACRIPKEAKPGVK---KNISRDAFGSKLGRIHMGKQDIHKLQTRKMKGLKKTPEE 291
BLAST of NO28G01060 vs. NCBI_GenBank
Match: XP_024081550.1 (ribosome production factor 2 homolog [Cimex lectularius]) HSP 1 Score: 241.1 bits (614), Expect = 6.400e-60 Identity = 122/272 (44.85%), Postives = 186/272 (68.38%), Query Frame = 0 Query: 132 KEPKVVEGGKQALFLKGTKCPELLQTVLRDLTKLLKPNSKMLSRKNEIRPFEDTSSLEFLMDKNECALFCFASHSKKRPHNLILGRTYDKHMLDMIEFGCSSVEGLDSFKEMEKKRYGSKPCLVFVGEGWHQDLTLERVQNLFMDFFRVDDVDKVALAGIDALTSFTALGTDSILIRNYHVQYKKSGGRVPNVVLQPMGPNFTLTVRRHQLAAPDLWRTACKQPRGEGVKKKVKNESTNVFGDKLGRIHVGRQDLGAMKVKRMKALRKGRDE 404 KEPK++E KQ+LFL+G KC E L + L+DL +L KP++ M++ KN+ P ++ + LE L K++ +LF F SHSKKRP+NL++GR YD +LD++E G +GL F + EK G KPCLVF G + QD L R++NLF+D F ++V V L G++ + +FT + I +R+Y V KKSG R+P V L+ +GP+ ++RR +LA+ DL++ ACK+P+ E KKVKN S + FG KLGR+H+ +Q++ ++ +++KAL+K R+E Sbjct: 22 KEPKLIENTKQSLFLRGRKCNETLLSCLKDLYQLKKPDAVMMNGKNDFVPLDNATPLETLSKKSDSSLFFFGSHSKKRPNNLVIGRMYDHQVLDIVELGVDEYKGLKDF-DTEKISVGLKPCLVFSGPKFSQDENLMRIKNLFVDMFHRENVQSVRLQGLEHVLTFTE-SENKIFMRSYRVLLKKSGTRLPRVELEEIGPSIDFSLRRMKLASEDLFKLACKKPK-ELKVKKVKNISRDPFGSKLGRVHIKQQNINKLQTRKLKALKKRREE 290 The following BLAST results are available for this feature:
BLAST of NO28G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01060 ID=NO28G01060|Name=NO28G01060|organism=Nannochloropsis oceanica|type=gene|length=2240bpback to top protein sequence of NO28G01060.1 >NO28G01060.1-protein ID=NO28G01060.1-protein|Name=NO28G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bpback to top Synonyms
Publications
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