NO28G00750, NO28G00750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00750 vs. NCBI_GenBank
Match: EWM20936.1 (Heat shock protein DnaJ [Nannochloropsis gaditana]) HSP 1 Score: 161.8 bits (408), Expect = 4.200e-36 Identity = 102/198 (51.52%), Postives = 119/198 (60.10%), Query Frame = 0 Query: 51 SDDEDLSLYDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAAHDQGHRHPASAPPSPAAPAG----DAFHAGGDGSFSYHDDADFGFRHAQSIFDAFFAQESDWNFGXXXXXXXXXXXXXXXXXXFFGHGV------FNHPFFHGGGSGMYQQQG-GFDPF 238 S E+L Y+ILG+ T S DD+++AYRRLALQMHPDRN GNEEE+RQ F+L+GEAYEVLSDPERR VYDRFGR+GLAAHDQG S+P P G D F + G +H DA FGF HAQ IFDAFF++E F G G+ F+ PFF G M QQQG GF PF Sbjct: 5 SGGEELCFYEILGVPPTSSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAG---HHFHRDATFGFPHAQEIFDAFFSEE----------RVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFF---GGAMQQQQGFGFRPF 186
BLAST of NO28G00750 vs. NCBI_GenBank
Match: XP_005855567.1 (hypothetical protein NGA_2108900 [Nannochloropsis gaditana CCMP526] >EKU20794.1 hypothetical protein NGA_2108900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 159.8 bits (403), Expect = 1.600e-35 Identity = 101/198 (51.01%), Postives = 118/198 (59.60%), Query Frame = 0 Query: 51 SDDEDLSLYDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAAHDQGHRHPASAPPSPAAPAG----DAFHAGGDGSFSYHDDADFGFRHAQSIFDAFFAQESDWNFGXXXXXXXXXXXXXXXXXXFFGHGV------FNHPFFHGGGSGMYQQQG-GFDPF 238 S E+L Y+ILG+ S DD+++AYRRLALQMHPDRN GNEEE+RQ F+L+GEAYEVLSDPERR VYDRFGR+GLAAHDQG S+P P G D F + G +H DA FGF HAQ IFDAFF++E F G G+ F+ PFF G M QQQG GF PF Sbjct: 5 SGGEELCFYEILGVPPASSTDDIKQAYRRLALQMHPDRNRGNEEEARQTFVLIGEAYEVLSDPERRDVYDRFGRQGLAAHDQGRNPADSSPRGPGGSRGSGVEDFFSSAG---HHFHRDATFGFPHAQEIFDAFFSEE----------RVGSGNGRGNFPFGFGGEGLAPRTSFFSPPFF---GGAMQQQQGFGFRPF 186
BLAST of NO28G00750 vs. NCBI_GenBank
Match: GAA31821.1 (DnaJ homolog subfamily B member 6 [Clonorchis sinensis]) HSP 1 Score: 100.1 bits (248), Expect = 1.500e-17 Identity = 57/132 (43.18%), Postives = 80/132 (60.61%), Query Frame = 0 Query: 59 YDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGL---AAHDQGHRHPASAPPSPAAPAGDAFHAG----GDGSFSYHDDADFGFRHAQSIFDAFFAQ 184 Y ILGL R +E+D+R+AYR+LAL+ HPD+NLG+ E+ + F + AYEVLSD E+RA+YDR+G+EGL H + H A +G H+G GD F +H + F FR + +F FFA+ Sbjct: 8 YKILGLERNATEEDIRRAYRQLALKWHPDKNLGDSGEAEKRFKEISAAYEVLSDAEKRAIYDRYGKEGLKGTRVHPRSHSRGAQLRRRRTMGSGSGLHSGLFDDGDFFFPFH-EFGFAFRDPEVVFREFFAK 138
BLAST of NO28G00750 vs. NCBI_GenBank
Match: XP_009173857.1 (hypothetical protein T265_09505 [Opisthorchis viverrini] >KER22387.1 hypothetical protein T265_09505 [Opisthorchis viverrini]) HSP 1 Score: 97.8 bits (242), Expect = 7.500e-17 Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 0 Query: 59 YDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAA---HDQGHRHPASAPPSPAAPAGDAFHAG----GDGSFSYHDDADFGFRHAQSIFDAFFAQ 184 Y ILGL R +E+D+R+AYR+LAL+ HPD+NLG+ E+ + F + AYEVLSD E+RA+YDR+GREGL H + A +G H+G GD F +H + F FR + +F FFA+ Sbjct: 8 YKILGLERNATEEDIRRAYRQLALKWHPDKNLGDSGEAEKRFKEISAAYEVLSDAEKRAIYDRYGREGLKGTRMHPRSQSRGAQIRRRRTMGSGTGLHSGLFDDGDFFFPFH-EFGFAFRDPEVVFREFFAK 138
BLAST of NO28G00750 vs. NCBI_GenBank
Match: OON21959.1 (DnaJ domain protein, partial [Opisthorchis viverrini]) HSP 1 Score: 97.8 bits (242), Expect = 7.500e-17 Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 0 Query: 59 YDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAA---HDQGHRHPASAPPSPAAPAGDAFHAG----GDGSFSYHDDADFGFRHAQSIFDAFFAQ 184 Y ILGL R +E+D+R+AYR+LAL+ HPD+NLG+ E+ + F + AYEVLSD E+RA+YDR+GREGL H + A +G H+G GD F +H + F FR + +F FFA+ Sbjct: 8 YKILGLERNATEEDIRRAYRQLALKWHPDKNLGDSGEAEKRFKEISAAYEVLSDAEKRAIYDRYGREGLKGTRMHPRSQSRGAQIRRRRTMGSGTGLHSGLFDDGDFFFPFH-EFGFAFRDPEVVFREFFAK 138
BLAST of NO28G00750 vs. NCBI_GenBank
Match: OWM91080.1 (hypothetical protein CDL15_Pgr023413 [Punica granatum]) HSP 1 Score: 97.8 bits (242), Expect = 7.500e-17 Identity = 53/127 (41.73%), Postives = 74/127 (58.27%), Query Frame = 0 Query: 59 YDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAAHDQGHRHPASAPPSPAAPAGDAFHAGGDGSFSYHDDADFGFRHAQSIFDAFFAQES 186 Y ILG+ R+ +DD++KAYR+LA++ HPD+N N++E+ F + EAY+VLSDP++RAVYD++G +GL PP P G F + GDG S+ F R A IF FF S Sbjct: 6 YKILGVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEDGLKGQ--------MPPPDAGGPGGTTFFSTGDGPTSFR----FNPRSADDIFAEFFGFSS 120
BLAST of NO28G00750 vs. NCBI_GenBank
Match: PKI51347.1 (hypothetical protein CRG98_028294, partial [Punica granatum]) HSP 1 Score: 97.8 bits (242), Expect = 7.500e-17 Identity = 53/127 (41.73%), Postives = 74/127 (58.27%), Query Frame = 0 Query: 59 YDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAAHDQGHRHPASAPPSPAAPAGDAFHAGGDGSFSYHDDADFGFRHAQSIFDAFFAQES 186 Y ILG+ R+ +DD++KAYR+LA++ HPD+N N++E+ F + EAY+VLSDP++RAVYD++G +GL PP P G F + GDG S+ F R A IF FF S Sbjct: 6 YKILGVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEDGLKGQ--------MPPPDAGGPGGTTFFSTGDGPTSFR----FNPRSADDIFAEFFGFSS 120
BLAST of NO28G00750 vs. NCBI_GenBank
Match: XP_015637533.1 (PREDICTED: dnaJ homolog subfamily B member 4 [Oryza sativa Japonica Group] >AAU10651.1 putative heat shock protein, hsp40 [Oryza sativa Japonica Group] >BAF18234.1 Os05g0562300 [Oryza sativa Japonica Group] >BAG90409.1 unnamed protein product [Oryza sativa Japonica Group] >EEE64688.1 hypothetical protein OsJ_19543 [Oryza sativa Japonica Group] >BAS95332.1 Os05g0562300 [Oryza sativa Japonica Group]) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-16 Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 0 Query: 56 LSLYDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAAHDQGHRHPASAPPSPAAPAGDA----FHAGGDGSFSYHDDADFGFRHAQSIFDAFFAQES 186 + Y ILG+ + S+DD++KAYR+LA++ HPD+N N++E+ F + EAYEVLSDP++RAVYD++G EGL PP A AG F GGDG + F R+A+ IF FF S Sbjct: 3 MDYYKILGVDKAASDDDLKKAYRKLAMKWHPDKNPNNKKEAENKFKQISEAYEVLSDPQKRAVYDQYGEEGL---------KGQVPPPGAGGAGPGGATFFSTGGDGPNVFR----FNPRNAEDIFAEFFGSSS 123
BLAST of NO28G00750 vs. NCBI_GenBank
Match: XP_003567904.1 (dnaJ homolog subfamily B member 4 [Brachypodium distachyon] >KQK04897.1 hypothetical protein BRADI_2g16660v3 [Brachypodium distachyon]) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-16 Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 0 Query: 56 LSLYDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEEESRQVFMLVGEAYEVLSDPERRAVYDRFGREGLAAHDQGHRHPASAPPSPAAPAGDA----FHAGGDGSFSYHDDADFGFRHAQSIFDAFFAQES 186 + Y ILG+ + +DD++KAYR+LA++ HPD+N N++E+ F + EAYEVLSDP++RAVYD++G EGL PP A AG F GGDG ++ F R+A+ IF FF S Sbjct: 3 MDYYKILGVEKAAGDDDLKKAYRKLAMKWHPDKNPNNKKEAENKFKQISEAYEVLSDPQKRAVYDQYGEEGL---------KGQVPPPGAGGAGPGGATFFSTGGDGPTTFR----FNPRNAEDIFAEFFGSSS 123
BLAST of NO28G00750 vs. NCBI_GenBank
Match: CDO62894.1 (heat shock protein 40, type II [Plasmodium reichenowi]) HSP 1 Score: 96.7 bits (239), Expect = 1.700e-16 Identity = 51/132 (38.64%), Postives = 83/132 (62.88%), Query Frame = 0 Query: 1 MMILHQILGVLIGSS---RVEDGGQSRHKGCKTAEFSQGATARQLVLMSSHRASDDEDLSLYDILGLTRTCSEDDVRKAYRRLALQMHPDRNLGNEE--ESRQVFMLVGEAYEVLSDPERRAVYDRFGREGL 128 +++ + + VLIGS+ + G K K +F+ + + SS +S ++ Y +LGLT+ C++DD++KAYR+LA++ HPD++L +E+ E+ + F L+GEAYEVLSD E+R YD FG+ GL Sbjct: 21 IVLFYTLEYVLIGSNYDKHNQSFGNEIFKNTKVFDFTSLRSLAEFNSGSSRESSKTDETDYYSVLGLTKDCTQDDIKKAYRKLAMKWHPDKHLNDEDKVEAERKFKLIGEAYEVLSDEEKRKNYDLFGQSGL 152 The following BLAST results are available for this feature:
BLAST of NO28G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00750 ID=NO28G00750|Name=NO28G00750|organism=Nannochloropsis oceanica|type=gene|length=1448bpback to top protein sequence of NO28G00750.1 >NO28G00750.1-protein ID=NO28G00750.1-protein|Name=NO28G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bpback to top Synonyms
Publications
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