NO28G00730, NO28G00730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO28G00730 vs. NCBI_GenBank
Match: EWM20920.1 (hypothetical protein Naga_100061g18 [Nannochloropsis gaditana]) HSP 1 Score: 294.3 bits (752), Expect = 6.300e-76 Identity = 183/463 (39.52%), Postives = 263/463 (56.80%), Query Frame = 0 Query: 3 QVHTFGKVIEGQILPEFEKMVLTYKKEMEPILADGKRYLEDIELAEGNVQTAYREYRDQAQALEKMGVSDSELDLWVFEMQYRVAVGLLLETWKVCRSALGALFKRMKDAEMTRRRVTHAALGTVLGQQTTYWKRLPEYGLTLPSQVHPRVSEPRLIEKEIGADVRTGVQRLQHSQEGWRRK--IVANRPMPMRTPTPFTSAPGLGGTSVDWSSNSINLALSTNAVAAGAAA--------GGEVKGVRTRSSRKQLAKEF----------------THVFERKNNNVFMPWKPVLAVLTVDNYLHIFDLPSCRNKATXXXXXXXXXXXXXXXFESLVAKPETVSRASCAIPLASPTTNLFHKENEG--GGIGIVSPSKSFNLDICDAHFKDAKSVRDLSFDIIEAGVRAGGGMGLQGVVKDLANKQVVTLKGRDKAEMTEWCNVFHTLKRMKCV--DAAVGAR 436 QVH F KVIE I+P E+M+ T+ E IL DG YLEDI++AE +VQ A+ +YRDQAQALEKMG+S+ + DLW++EM YR+AV +LLETW++ +AL A+F RMKD EM RR+ H+AL T+ +QT YW++LP G+TL S V ++PRLIEK+IGAD+R G +RL S+EG K I+A RP+ + T SA LG TS S N + + + +G+ + + ++ RK+ AK+ +FE+K+ NVF + VLAV+T+D+YLHIFDLP ++ + L+ +P+ VSRA + +F + EG + +VSP + NL C+A+ K A S +D +I+E G G G + V++ LA+++VV LKG + E+ +WC V KRM A VGAR Sbjct: 224 QVHIFAKVIETNIIPVLEEMITTFNASEESILQDGGTYLEDIDVAEDHVQQAFIQYRDQAQALEKMGMSEGQ-DLWIYEMHYRMAVVILLETWELSSTALTAMFARMKDTEMARRQAIHSALQTLNEEQTAYWRKLPHLGVTLSSLVQSHATDPRLIEKQIGADIRMGAKRLGLSEEGIHLKGQIMATRPLRVFTQASIQSA-NLGKTS------SFNESTMEHRIKSGSGSFRCETEVVPNKKTAKANKNRRKKQAKKLFSQRLDGPLQSPLITRAQIFEQKSTNVFTCKRHVLAVMTIDSYLHIFDLPQVSIRSQTVAANTASPAAQAALY-GLIKRPDHVSRAVGHTSSVISSNAVFTSDKEGTLKTLDLVSPRLTLNLAQCEAYVKGAASKKDTCLEIVEVGAGL-GSKGFKKVLEGLAHRRVVVLKGNTQEELEDWCGVIDACKRMSRAGSPAVVGAR 676
BLAST of NO28G00730 vs. NCBI_GenBank
Match: XP_005855566.1 (hypothetical protein NGA_2012800, partial [Nannochloropsis gaditana CCMP526] >EKU20793.1 hypothetical protein NGA_2012800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 293.5 bits (750), Expect = 1.100e-75 Identity = 183/463 (39.52%), Postives = 263/463 (56.80%), Query Frame = 0 Query: 3 QVHTFGKVIEGQILPEFEKMVLTYKKEMEPILADGKRYLEDIELAEGNVQTAYREYRDQAQALEKMGVSDSELDLWVFEMQYRVAVGLLLETWKVCRSALGALFKRMKDAEMTRRRVTHAALGTVLGQQTTYWKRLPEYGLTLPSQVHPRVSEPRLIEKEIGADVRTGVQRLQHSQEGWRRK--IVANRPMPMRTPTPFTSAPGLGGTSVDWSSNSINLALSTNAVAAGAAA--------GGEVKGVRTRSSRKQLAKEF----------------THVFERKNNNVFMPWKPVLAVLTVDNYLHIFDLPSCRNKATXXXXXXXXXXXXXXXFESLVAKPETVSRASCAIPLASPTTNLFHKENEG--GGIGIVSPSKSFNLDICDAHFKDAKSVRDLSFDIIEAGVRAGGGMGLQGVVKDLANKQVVTLKGRDKAEMTEWCNVFHTLKRMKCV--DAAVGAR 436 QVH F KVIE I+P E+M+ T+ E IL DG YLEDI++AE +VQ A+ +YRDQAQALEKMG+S+ + DLW++EM YR+AV +LLETW++ +AL A+F RMKD EM RR+ H+AL T+ +QT YW++LP G+TL S V ++PRLIEK+IGAD+R G +RL S+EG K I+A RP+ + T SA LG TS S N + + + +G+ + + ++ RK+ AK+ +FE+K+ NVF + VLAV+T+D+YLHIFDLP ++ + L+ +P+ VSRA + +F + EG + +VSP + NL C+A+ K A S +D +I+E G G G + V++ LA+++VV LKG + E+ +WC V KRM A VGAR Sbjct: 165 QVHIFAKVIETNIIPVLEEMITTFNASEESILQDGGTYLEDIDVAEDHVQQAFIQYRDQAQALEKMGMSEGQ-DLWIYEMHYRMAVVILLETWELSSTALTAMFARMKDTEMARRQAIHSALQTLNEEQTAYWRKLPHLGVTLSSLVQSHATDPRLIEKQIGADIRMGAKRLGLSEEGIHLKGQIMATRPLRVFTQASIQSA-NLGKTS------SFNESTMEHRIKSGSGSFRCETEVVPNKKTAKANKNRRKKQAKKLFSQRLDGPLQSPLITRAQIFEQKSTNVFTCKRHVLAVMTIDSYLHIFDLPQVSIRSQTVAANTASPAAQAALY-GLIKRPDHVSRAVGHTSSVISSNAVFTSDKEGTLKTLDLVSPRLTLNLAQCEAYVKGAASKKDTCLEIVEVGAGL-GSKGFKKVLEGLAHRRVVVLKGNTQEELEDWCGVIDACKRMLRAGSPAVVGAR 617
BLAST of NO28G00730 vs. NCBI_GenBank
Match: EWM21475.1 (hypothetical protein Naga_100019g15 [Nannochloropsis gaditana]) HSP 1 Score: 99.4 bits (246), Expect = 3.000e-17 Identity = 100/436 (22.94%), Postives = 179/436 (41.06%), Query Frame = 0 Query: 2 YQVHTFGKVIEGQILPEFEKMVLTYKKEMEPILADGKRYLEDIELAEGNVQTAYREYRDQAQALEKMGVSDSEL----------DLWVFEMQYRVAVGLLLETWKVCRSALGALFKRMKDAEMTRRRVTHAALGTVLGQQTTYWKRLPEYGLTLPSQVHP-RVSEPRLIEKEIGADVRTGVQRLQHSQEGWRRKIVANRPMPMRTPTPFTSAPGLGGTSVDWSSNSINLALSTNAVAAGAA-----AGGEVKGVRTRSSRKQLAKEFTHVFERKNNNVFMPWKPVLAVLTVDNYLHIFDLPSCRNKATXXXXXXXXXXXXXXXFESLVAKPETVSRASCAIPLASPTTNLFHKENEGGGIGIVSPSKSFNLDICDAHFKDAKSVRDLSFDIIEAGVRAGGGMGLQGVVKDLANKQVVTLKGRDKAEMTEWCNVFHT 422 Y T ++++G++ +V ++K+ + +L +G LE++ AE ++ A+ EY A L + + DLW+ +MQYRVAV L W+ + L LF+RMK E+ RR +A + + Q ++W +LP+ + ++P +E+E+ +++T + + ++ +S G D +N+ + + A+GAA G + + + R+ E V ++ + W+P LAVLT+DN+LHIFD+PS T F+ LV +P N + +G + V PS L A ++ + +FD+ EA G V K +VV LK R + +M W + ++ Sbjct: 169 YVRDTRRELVDGKL----RNLVNSFKRTSDEVLEEGCLALENVNAAESHIVAAFAEYMKGAGNLTSYSKNSTTTSPHQQQQGTPDLWLLDMQYRVAVELQKTIWQETQHHLHDLFRRMKTLEVNRRSQLNALVLRFMQNQGSFWAQLPQAAAECSLAISTLSCTDPHQVEEELSEEIKTCAKAAEQKEQ------------------HHSSGKENGAKGRDKDQRGVNVKAADDDAASGAAVPEPFVGNLMAPLDSPLVRRAEVLEHRRVTGVESLPLMKRWRPCLAVLTLDNFLHIFDMPSEVTAGT--------VLSPREAFKLLVPRP----------------INRRGRFRKGKDVERVIPSHFLALPYSSARYRPEEGAE--AFDVTEARENT----GFVSVFKAREVTRVV-LKARTQEKMEAWVAIVNS 551
BLAST of NO28G00730 vs. NCBI_GenBank
Match: EJK45109.1 (hypothetical protein THAOC_36288 [Thalassiosira oceanica]) HSP 1 Score: 85.5 bits (210), Expect = 4.500e-13 Identity = 90/391 (23.02%), Postives = 154/391 (39.39%), Query Frame = 0 Query: 5 HTFGKVIEGQILPEFEKMVLTYKKEMEPILADGKRYLEDIELAEGNVQTAYREYRDQAQAL----EKMGVSDSE------LDLWVFEMQYRVAVGLLLETWKVCRSALGALFKRMKDAEMTRRRVTHAALGTVLGQQTTYWKRLPEYGLTLPSQVHPRVSEPRLIEKEIGADVRTGVQRLQHSQEGWRRKIVANRPMPMRTPTPFTSAPGLGGTSVDWSSNSINLALSTNAVAAGAAAGGEVKGVRTRSSRKQLAKEFTHVFERKNNNVFMPWKPVLAVLTVDNYLHIFDLP-SCRNKATXXXXXXXXXXXXXXXFESLVAKPETVSRASCAIPLASPTTNLFHKENEGGGIGIVSPSKSFNLDICDAHFKDAKSVRDLSFDIIEAGVRAG 385 H K + ILPE ++ K E+ + G L+++E AE V ++ Y A E ++D+E LD+WV EM+YR+AV L W+ C + L LF MKD E TRR + Q W+RLP T+ +++ + +E ++ A +R Q +Q + + +P + P S+ + N LS+ V S + AK V E++ + WK L + T D++L +F+LP +C+ F++L+ S + P++ + + P++SF+L C+ K+ K F+I+E +G Sbjct: 184 HGVAKFLSLDILPELSSLLNHLKSEIVFVEKLGDSILKELESAEQVVCKSWDSYNSTVMAAAANDEIPNLADAEEEEKEPLDVWVAEMRYRMAVAFLSSVWEKCSTELSKLFLSMKDTECTRRSQLKDFMIKATEMQDELWQRLPSSIETIQKELNEWPMDRNRVENDVQASIRERAQAIQIEEAEHK------KPSDVADTNPELSSV---------NDREGNFELSSPLV----------------SDLLRKAK----VVEKRGAMMMSGWKSALVIFTKDSFLQVFELPANCK---------LQPGSAPEVAFQNLIPPIVVPSMDGVKSGVKFPSSRYWFDN--------LVPAESFSLRNCEVSLKEGKDRG--QFEIVETSTSSG 520
BLAST of NO28G00730 vs. NCBI_GenBank
Match: XP_002290897.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92649.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 81.3 bits (199), Expect = 8.400e-12 Identity = 111/469 (23.67%), Postives = 179/469 (38.17%), Query Frame = 0 Query: 14 QILPEFEKMVLTYKKEMEPILAD---------------GKRYLEDIELAEGNVQTAYREYRDQA------------------------------QALEKMGVSDSELDLWVFEMQYRVAVGLLLETWKVCRSALGALFKRMKDAEMTRRRVTHAALGTVLGQQTTYWKRLPEYGLTLPSQVHPRVSEPRLIEKEIGADVRTGVQRLQHSQEGWRRKIVANRPMPMRTPTPFTSAPGLGGTSVDWSSNSINLALSTNAVAAGAAAGGEVKGVRTRSSRKQLAKEF---THVFERKNNNVFMPWKPVLAVLTVDNYLHIFDL-PSCRNKATXXXXXXXXXXXXXXXFESLVAKPETVSRASCAIPLASPTTNLFHKENEGGGIGIVS---------PSKSFNLDICDAHFKDAKSVRDLSFDIIEAGVRAGGG----------MGLQGVVKDLANKQVVTLKGRDKAEMTE 415 QI ++E+MVL KKE+ P L+ G + ++E AE V TA+ Y ++A A E V+ D+WV EM+YR+AV L W+ C + L LF MK+AE RR L +Q W LP + ++ E +L+E ++ +R Q + + ++ + T+V+ S+N +AG + + +G SS L + V E+++ N+ WK LAV+T D++L +F+L P+C+ F++L+ P+ PT E+ GGI I S PS+S L C FKD KS +F+I+E + +G M L+ V + + + LK D+A + Sbjct: 206 QIAQQYEEMVLFIKKEVLPELSSLNDHLKSEVVLMEKLGDSIMAELETAEQQVCTAWEAYYNKAVEFSGSSSEAFKSRHVGASTTXXXXXXXXXSASESNVVAVECSDVWVDEMRYRMAVAFLSSCWEKCSAELSKLFITMKNAECDRRNRIKELLIQATQRQERLWLGLPSVVNPVLKELINWSMERKLVEDDVQNSIRARAQAILRDETEHKK----------------ATDDATATTTVNSSNNKYQ--------SAGLSGVDQKEGNFELSS--PLVSDLMCKAKVIEKRSGNLMSSWKVTLAVVTSDSFLQLFELPPNCK---------LQPGSAPEVAFQNLIP------------PVVVPT-----MESIKGGIKIPSTKHWFDHLVPSESIALPNCVVSFKDEKS---SAFEIVETQLTSGASKMFTKTVNRKMLLRAVTRAESEDFIEALKNGDQARQLQ 619
BLAST of NO28G00730 vs. NCBI_GenBank
Match: CBN78329.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.6 bits (187), Expect = 2.100e-10 Identity = 103/414 (24.88%), Postives = 154/414 (37.20%), Query Frame = 0 Query: 18 EFEKMVLTYKKEMEPILADGKRYLEDIELAEGNVQTAYREYRD-----------QAQALEKMGVSD-SELDLWVFEMQYRVAVGLLLETWKVCRSALGALFKRMKDAEMTRRRVTHAALGTVLGQQTTYWKRLPEYGLTLPSQVHPRVSEPRLIEKEIGADVRTGVQRLQHSQEGWRRKIVANRPMPMRTPTPFTSAPGLGGTSVDWSSNSINLALSTNAVAAGAAAGGEVKGVRTRSSRKQLAKEFTHVFERKNNNVFMPWKPVLAVLTVDNYLHIFDLPSCRNKATXXXXXXXXXXXXXXXFESLVAKPETVSRASCAIPLASPTTNLFHKENEG---GGIGIVSPSKSFNLDICDAHFK-DAKSVRDLSFDIIEAGVRAGGGMGLQGVVKDLANKQVVTLKGRDKAEMTEW 416 + MV ++ G L + AE N AY Y++ A+A + + D + D+W+ +M YRVAV WK + LG LF RMKD E+ RR+ L ++ Q W+ LP + + + L+++E+ +R G RL + + A AG E L T + R+ + W VLA+LT D+YL +FD+P R A F LV KPE + A+ L HK+ +G GG+ V PS + +L C FK D KS D +F+I E G++ V KD + TL+GR + M +W Sbjct: 244 QLNAMVKKLDDRFAEMVGQGTACLRLMHSAEMNSAKAYGRYQEVVTASLGREASPARATAPLTLRDVAGSDVWLADMNYRVAVTQQARVWKGVSAKLGDLFGRMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARL--LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVERSETMPADFLAGLE------SPLASSLIARSTMLERREKAMIASRWILVLAILTHDSYLLLFDVP--RGTAA---HKKQLNARTSEAFAELVPKPEV---GAMAVELGK------HKDGKGVDSGGLP-VPPSVAIDLSACQVSFKPDGKS--DATFEITEIKPT----RGVKTVFKDFEETK-FTLRGRSQEAMVDW 627 The following BLAST results are available for this feature:
BLAST of NO28G00730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00730 ID=NO28G00730|Name=NO28G00730|organism=Nannochloropsis oceanica|type=gene|length=1494bpback to top protein sequence of NO28G00730.1 >NO28G00730.1-protein ID=NO28G00730.1-protein|Name=NO28G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=436bpback to top Synonyms
Publications
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