NO28G00100, NO28G00100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00100 vs. NCBI_GenBank
Match: XP_005840058.1 (hypothetical protein GUITHDRAFT_64615 [Guillardia theta CCMP2712] >EKX53078.1 hypothetical protein GUITHDRAFT_64615 [Guillardia theta CCMP2712]) HSP 1 Score: 204.5 bits (519), Expect = 3.700e-49 Identity = 108/226 (47.79%), Postives = 141/226 (62.39%), Query Frame = 0 Query: 1 MASCYGGVKGGAIKNDGRKDGHLLPYLPIQTSLKNGMKVEVDFYRENEYHVGWALLNKELEEGRSWPFWGTMS-FEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEESLVDAYMYHYDLTTYTE 226 M S YGG G +GR +L LP+ LK+G +VEVD RE E+ LLN +E+GR+WPF T + E+F+ YFLSH AFVVR+ G ++N K GD V+G +YIKPN+P RC+H+CNGG IT+E R GVG +M +L+ A+ LGY+ SYFNLVFA+N SI LW+ GF+R++ + A+LKG E LVDAY Y YDL T E Sbjct: 1 MTSAYGGKAG-----NGRLGEKMLKMLPLSAELKSGRQVEVDLVREEEWEECMRLLNAIIEQGRAWPFDKTYTRMEDFQGYFLSHTAFVVRSTS------AGLDANKKFSNPGD----VMGIFYIKPNYPGRCSHVCNGGFITKEEFRMQGVGKLMGACYLKFARALGYEMSYFNLVFASNEESIRLWDGLGFQRVSLLKKCAKLKGIEGLVDAYGYCYDLATVDE 211
BLAST of NO28G00100 vs. NCBI_GenBank
Match: XP_002288329.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93765.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 203.4 bits (516), Expect = 8.300e-49 Identity = 114/231 (49.35%), Postives = 147/231 (63.64%), Query Frame = 0 Query: 1 MASCYGGVKGGAIKNDGRKDGHLLPYL-PIQTSLKNGMKVEVDFYR-------ENEYHVGWALLNKELEEGRSWPFWGTM-SFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKG-EESLVD-AYMYHYDL 221 M + YGG +DG+ + HLL +L P Q++L +G +VEVDF+R E+E+ G AL+N + EGRSWPF S E++ YFLSH AFVVRA+ G +A S+ E +LG +YIKPNFP RC+HICNGG I R RG GVG +M FLR ++DLGYK+SYFNLVF +N SI LWE GF+R+AT+ AARL+G E ++D AY Y YDL Sbjct: 1 MTTAYGGT-----PSDGKHNAHLLTHLIPYQSTLSDGRRVEVDFFRHSSTEIEEDEWFAGLALMNLIIREGRSWPFEEEFSSVEQYSGYFLSHTAFVVRALNNGMDASKRNSSSKGE---------ILGCFYIKPNFPGRCSHICNGGFIVAPRFRGLGVGRLMGNVFLRASRDLGYKSSYFNLVFKSNPGSIHLWESLGFQRVATLEKAARLEGMNEGVLDTAYGYRYDL 217
BLAST of NO28G00100 vs. NCBI_GenBank
Match: XP_014150538.1 (hypothetical protein SARC_10871 [Sphaeroforma arctica JP610] >KNC76636.1 hypothetical protein SARC_10871 [Sphaeroforma arctica JP610]) HSP 1 Score: 202.6 bits (514), Expect = 1.400e-48 Identity = 104/223 (46.64%), Postives = 135/223 (60.54%), Query Frame = 0 Query: 10 GGAIKNDGRKDGHLLPYLPIQTSLKNGMKVEVDFYRENEYHVGWALLNKELEEGRSWPFWGTM-SFEEFRAYFLSHNAFVVRA-------VKGGGEACVGAESNGKE-GVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEESLVDAYMYHYDLTTY 224 GG + DGR LLPYLP++ +LK+G VE+DF+RE+EY G+ L+N+ + EG+SWPF S + FR YFLSH AFVVR K V S G + G ++LG +Y+KPNFPDRC+ ICNGG IT R GV +M + R+AKDLGY+ FNLVFA+N S+ LW+ GF RLA +P A LKG + DAY Y+ +L Y Sbjct: 6 GGTVPGDGRIGAELLPYLPLRQTLKDGTAVELDFFREDEYEQGFTLMNQIIVEGQSWPFMHAYDSVDAFRCYFLSHAAFVVRVCDVPEKFTKATDSTIVENASTGTDLGTVDLRKDAILGCFYVKPNFPDRCSGICNGGFITNPMARRRGVAKLMGKLYCRLAKDLGYRGCLFNLVFASNEASLRLWDGLGFTRLACLPQCAELKGIDGFTDAYQYYRNLLEY 228
BLAST of NO28G00100 vs. NCBI_GenBank
Match: GAX16110.1 (hypothetical protein FisN_3Hh410 [Fistulifera solaris]) HSP 1 Score: 179.1 bits (453), Expect = 1.700e-41 Identity = 98/227 (43.17%), Postives = 127/227 (55.95%), Query Frame = 0 Query: 1 MASCYGGVKGGAIKNDGRKDGHLL-PYLPIQTSLKNGMKVEVDFYRENEYHVGWALLNKELEEGRSWPFWGTM-SFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEESLVDAYMYHYDLTTYTE 226 M + Y G G DG LL ++P T+L++ V+V + E+E++ G L+N ++EGRSWPF + E +R YFLSH AFVVR + E V G +YIKPNFP RC+HICNGG IT R GV +M FL+ A LGYK++YFNLVF +N S+ALWE GF+R+A + AARLKG + L AY Y YDL E Sbjct: 1 MTTAYSGEPG-----DGNAGLSLLKDWIPFDTTLRDETPVQVGPFEESEWNAGMTLMNHVIQEGRSWPFESEFETLEAYRGYFLSHAAFVVRCL---------------------ETKEVAGCFYIKPNFPGRCSHICNGGFITHPDYRRRGVAHLMGKVFLKAAHQLGYKSAYFNLVFQSNEASVALWESLGFQRVAVLEQAARLKGLDKLDTAYGYRYDLEKMDE 201
BLAST of NO28G00100 vs. NCBI_GenBank
Match: GAX10213.1 (hypothetical protein FisN_3Lh410 [Fistulifera solaris]) HSP 1 Score: 174.5 bits (441), Expect = 4.100e-40 Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 0 Query: 23 LLPYLPIQTSLKNGMKVEVDFYRENEYHVGWALLNKELEEGRSWPFWGTM-SFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEESLVDAYMYHYDL 221 L ++P T+L++ V+V + E+E++ G L+N + EGRSWPF + + +R YFLSH AFVVR + E V G +YIKPNFP RC+HICNGG IT R GV +M FL+ A LGYK++YFNLVF +N S+ALWE GF+R+A + AARLKG + L AY Y YDL Sbjct: 19 LKDWIPFDTTLRDETLVQVGPFEESEWNAGMTLMNHVIREGRSWPFESEFETLDAYRGYFLSHAAFVVRCL---------------------ETKEVAGCFYIKPNFPGRCSHICNGGFITHPDYRRRGVARLMGKVFLKAAHQLGYKSAYFNLVFQSNMASVALWESLGFQRVAVLEQAARLKGLDKLDTAYGYRYDL 196
BLAST of NO28G00100 vs. NCBI_GenBank
Match: XP_005709978.1 (N-Acyltransferase [Chondrus crispus] >CDF39684.1 N-Acyltransferase [Chondrus crispus]) HSP 1 Score: 168.7 bits (426), Expect = 2.300e-38 Identity = 93/224 (41.52%), Postives = 125/224 (55.80%), Query Frame = 0 Query: 1 MASCYGGVKGGAIKND---GRKDGHLLPYLPIQTSLKNGMKVEVDFYR-ENEYHVGWALLNKELEEGRSWPFWGTMSFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEESLVDAYMYHYDL 221 M S Y G A+ N+ GR LPY+P+ +L NG V++DF R +++ LLN ++EG SWPF ++ EFR+YF SH A V R G +V+G +Y KPNFP RCAH CNGG IT+ R GV ++M FL++AKDL +KA FNLVF++N S+ LWEK GF++LA +P L+ E DA Y+YDL Sbjct: 1 MTSAY----GQAVLNEDSTGRDYSSSLPYIPLIRNLPNGRVVKIDFIRNQHDIAAVRTLLNDVIKEGMSWPFERPLTDFEFRSYFFSHTALVARNSSG----------------------AVIGAFYCKPNFPGRCAHYCNGGFITDPGYRRQGVASLMGTVFLQVAKDLEFKAVLFNLVFSSNVASLRLWEKLGFKKLARLPRVGNLR--EGYSDAIQYYYDL 196
BLAST of NO28G00100 vs. NCBI_GenBank
Match: CDS09281.1 (hypothetical protein LRAMOSA10641 [Lichtheimia ramosa]) HSP 1 Score: 167.5 bits (423), Expect = 5.000e-38 Identity = 99/225 (44.00%), Postives = 127/225 (56.44%), Query Frame = 0 Query: 1 MASCYGGVKGGAIKNDGRKDGHLLPYLPIQTSLKNGMKV---EVDFYRENEYHVGWALLNKELEEGRSWPFWGTMSFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGE-ESLVDAYMYHYDLT 222 M+S YG + DG L LPI+ +L+NG + VD N +L N ELE G ++P + ++F YFL+++AFV+ VKGG + G E D VLG YY+KPN+P RC+HICNGG T RG+G G MA +FL A LGYKAS FNLVFA N SI +WE+ GF R+ IP AARLK + LVDAY+YH D + Sbjct: 1 MSSAYGKIPKPV------NDGSLKEQLPIRKTLRNGQEATLQAVDPTNPNLVKHLHSLFNGELERGSTYPQEEPLDAKQFEDYFLAYDAFVL--VKGGPI---------EPGKEYDYEDKVLGMYYVKPNYPGRCSHICNGGFFTSPLHRGYGAGVAMAETFLITAPGLGYKASVFNLVFANNEASIRIWERLGFNRVGCIPQAARLKNSPDQLVDAYIYHMDFS 208
BLAST of NO28G00100 vs. NCBI_GenBank
Match: XP_002602128.1 (hypothetical protein BRAFLDRAFT_128458 [Branchiostoma floridae] >EEN58140.1 hypothetical protein BRAFLDRAFT_128458 [Branchiostoma floridae]) HSP 1 Score: 164.5 bits (415), Expect = 4.300e-37 Identity = 84/209 (40.19%), Postives = 116/209 (55.50%), Query Frame = 0 Query: 16 DGRKDGHLLPYLPIQTSLKNGMKVEVDFYRENEYHVGWALLNKELEEGRSWPFWGTMSFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEESLVDAYMYHYDLTTYT 225 + R LPYLP+ SL NG +V +D YRE + +++ K +E+G+S+P S ++FR Y+LSH+ FV R E VLG +Y+KPNFP R +HICN G I +E RG G+G MA FL IA+DLGYKAS+FNLV+ N S+ W GF+ + +P A +KG DA ++YD +T T Sbjct: 7 EARGSSQRLPYLPLPMSLPNGRQVSLDHYREQDVEQLFSIFKKIVEDGQSYPQEKMESLQDFRDYYLSHDVFVARDTAKTSE-------------------DVLGAFYVKPNFPGRSSHICNAGFIVKESERGQGLGKKMAERFLYIARDLGYKASFFNLVYVNNEASLRTWRGLGFKEIGIVPNAGFIKG-LGYTDAVQFYYDFSTLT 195
BLAST of NO28G00100 vs. NCBI_GenBank
Match: XP_019630010.1 (PREDICTED: L-azetidine-2-carboxylic acid acetyltransferase-like [Branchiostoma belcheri]) HSP 1 Score: 164.1 bits (414), Expect = 5.600e-37 Identity = 83/201 (41.29%), Postives = 115/201 (57.21%), Query Frame = 0 Query: 24 LPYLPIQTSLKNGMKVEVDFYRENEYHVGWALLNKELEEGRSWPFWGTMSFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEESLVDAYMYHYDLTTYT 225 LPYLPI SL +G +V +D YRE + +++ K +E+G+S+P S ++FR Y+LSH+ FV R + E VLG +Y+KPNFP R +HICN G I +E RG G+G MA FL IA+DLGYKAS+FNLV+ N S+ W GF+ + +P A +KG DA ++YD +T T Sbjct: 15 LPYLPILMSLPSGRQVSLDHYREQDEQQVFSIFKKIVEDGQSYPQEKVESLQDFRDYYLSHDVFVAR--------------------DATETEEVLGAFYVKPNFPGRSSHICNAGFIVKESERGQGLGKRMAQYFLYIARDLGYKASFFNLVYVNNEASLRTWRGLGFKEIGVVPNAGYIKG-LGYTDAVQFYYDFSTLT 194
BLAST of NO28G00100 vs. NCBI_GenBank
Match: EJK62164.1 (hypothetical protein THAOC_17237 [Thalassiosira oceanica]) HSP 1 Score: 162.9 bits (411), Expect = 1.200e-36 Identity = 90/172 (52.33%), Postives = 109/172 (63.37%), Query Frame = 0 Query: 52 GWALLNKELEEGRSWPFWGTM-SFEEFRAYFLSHNAFVVRAVKGGGEACVGAESNGKEGVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALSFLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKG--EESLVDAYMYHYDL 221 G AL+N + EGRSWPF S + +R YFLSH AFVVR++ GE S +G VLG +YIKPNFP RC+H+CNGG IT R R GVG +M FLR A+DLGYK+SYFNLVF +N S+ LWE GF R+AT+ AARL+G E L AY Y +DL Sbjct: 216 GLALMNLVIREGRSWPFEEDFTSIDGWRGYFLSHTAFVVRSL-DCGEDSTDKHSRSTKG-------EVLGCFYIKPNFPGRCSHVCNGGFITAPRFRSLGVGRLMGNVFLRAARDLGYKSSYFNLVFKSNGGSVKLWESLGFERVATLENAARLEGLDEGELDTAYGYRFDL 379 The following BLAST results are available for this feature:
BLAST of NO28G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00100 ID=NO28G00100|Name=NO28G00100|organism=Nannochloropsis oceanica|type=gene|length=3598bpback to top protein sequence of NO28G00100.1 >NO28G00100.1-protein ID=NO28G00100.1-protein|Name=NO28G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=246bpback to top protein sequence of NO28G00100.2 >NO28G00100.2-protein ID=NO28G00100.2-protein|Name=NO28G00100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=188bpback to top protein sequence of NO28G00100.3 >NO28G00100.3-protein ID=NO28G00100.3-protein|Name=NO28G00100.3|organism=Nannochloropsis oceanica|type=polypeptide|length=188bpback to top Synonyms
Publications
|