NO27G01150, NO27G01150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01150 vs. NCBI_GenBank
Match: EWM20983.1 (hypothetical protein Naga_100487g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 243.8 bits (621), Expect = 5.300e-61 Identity = 113/149 (75.84%), Postives = 124/149 (83.22%), Query Frame = 0 Query: 81 ITTKRHALPPFDSPLDPATLESMAXXXXXXXXXXXXXXXIHEVTPEQLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRPAPDYEALSEAAKRRRAGG 230 + ++ LPPFDSPLDPATLE MA ++EVT EQLWVGFIAGVFPF+WAG+EFWKRID QQRCGVCQGSGLVYE+A+GKSL+ RKCYACGGFLPWAGW+RFWLSNLDIGNGGVLQRPA DYEALSEAAKRRRAGG Sbjct: 98 VIRRQAMLPPFDSPLDPATLEGMA---AASSAAGSTGGALNEVTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAGG 243
BLAST of NO27G01150 vs. NCBI_GenBank
Match: CBJ27875.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 132.9 bits (333), Expect = 1.300e-27 Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0 Query: 126 EQLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRPAPDYEALSEAAKRRRAG 229 +++ +G A + + WA YEF KRI TQ+ C VC+GSGLV S +GK L +KCYACGGFLPW W +FW +N+D+GNGGVLQRPA DY+ L+EAA+ + G Sbjct: 50 DKIVIGSAACLAAYAWAAYEFGKRIVTQRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAARAAKDG 152
BLAST of NO27G01150 vs. NCBI_GenBank
Match: KXZ46869.1 (hypothetical protein GPECTOR_40g603 [Gonium pectorale]) HSP 1 Score: 97.4 bits (241), Expect = 6.100e-17 Identity = 46/85 (54.12%), Postives = 52/85 (61.18%), Query Frame = 0 Query: 127 QLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRP 212 ++W+GF+AGV PF YEF KRI Q RC VC G GLV + GK L RKC CGGF PW WK F S GNGG LQ+P Sbjct: 74 EIWIGFVAGVVPFAIGSYEFGKRIIIQLRCEVCGGRGLVPSAGPGKYL---RKCPQCGGFFPWISWKMFLSSTAAPGNGGPLQQP 155
BLAST of NO27G01150 vs. NCBI_GenBank
Match: XP_003082370.1 (unnamed product [Ostreococcus tauri] >CAL57316.1 unnamed product [Ostreococcus tauri]) HSP 1 Score: 97.1 bits (240), Expect = 8.000e-17 Identity = 51/113 (45.13%), Postives = 64/113 (56.64%), Query Frame = 0 Query: 122 EVTPEQLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRPAPDYEALSEAAKRRRAGGKEGKD 235 EV QLW GFIAG+ PF A YEF KR+ Q+RC C G+GLV G+ + KC ACGGFLPW W+RF S ++GNGGV++ P A K A + +D Sbjct: 30 EVEQWQLWFGFIAGLSPFAIAAYEFGKRVLIQKRCARCAGAGLVVLGDDGRKV----KCPACGGFLPWESWERFLTS--EVGNGGVVRAPKGQTSAFYSVEKAVEASERMVRD 136
BLAST of NO27G01150 vs. NCBI_GenBank
Match: OUS46616.1 (hypothetical protein BE221DRAFT_191790 [Ostreococcus tauri]) HSP 1 Score: 97.1 bits (240), Expect = 8.000e-17 Identity = 51/113 (45.13%), Postives = 64/113 (56.64%), Query Frame = 0 Query: 122 EVTPEQLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRPAPDYEALSEAAKRRRAGGKEGKD 235 EV QLW GFIAG+ PF A YEF KR+ Q+RC C G+GLV G+ + KC ACGGFLPW W+RF S ++GNGGV++ P A K A + +D Sbjct: 60 EVEQWQLWFGFIAGLSPFAIAAYEFGKRVLIQKRCARCAGAGLVVLGDDGRKV----KCPACGGFLPWESWERFLTS--EVGNGGVVRAPKGQTSAFYSVEKAVEASERMVRD 166
BLAST of NO27G01150 vs. NCBI_GenBank
Match: XP_001420667.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98960.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 95.9 bits (237), Expect = 1.800e-16 Identity = 56/119 (47.06%), Postives = 65/119 (54.62%), Query Frame = 0 Query: 127 QLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLV-YESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRPAPDYEAL----------SEAAKRRRAGGKEGKD 235 QLW GFIAGV PF A YEF KR+ Q+RC +C GSGLV E + G L KC ACGGFLPW W+RF S + GNGGV++ P A E A RR G+ D Sbjct: 64 QLWFGFIAGVSPFAIAAYEFGKRVLIQRRCALCAGSGLVEVERSRGARLV---KCTACGGFLPWQSWERFLSS--EAGNGGVVRAPKGQTSAFYSVEKATAASREMAARRARDGEASSD 177
BLAST of NO27G01150 vs. NCBI_GenBank
Match: XP_001695614.1 (predicted protein [Chlamydomonas reinhardtii] >PNW84472.1 hypothetical protein CHLRE_03g145567v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 94.7 bits (234), Expect = 4.000e-16 Identity = 50/107 (46.73%), Postives = 57/107 (53.27%), Query Frame = 0 Query: 127 QLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRP------------APDYEALSEA 222 ++W+GFIAGV PF YEF KRI Q RC VC G GLV GK RKC CGGF PW W+ F S GNGG LQ+P APD ++EA Sbjct: 170 EIWLGFIAGVVPFAIGSYEFGKRILIQLRCEVCGGRGLVPSGGAGKD-KYLRKCPQCGGFFPWISWQMFLSSTATPGNGGPLQQPRGQTSVLYSVPDAPDPARMAEA 275
BLAST of NO27G01150 vs. NCBI_GenBank
Match: XP_007512147.1 (predicted protein [Bathycoccus prasinos] >CCO66235.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 94.7 bits (234), Expect = 4.000e-16 Identity = 52/113 (46.02%), Postives = 67/113 (59.29%), Query Frame = 0 Query: 123 VTPEQLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFW--LSNLDIGNGGVLQRPAP------DYEALSEAAKRRRA 228 + P QL+ GF AG+ PFI A YEF KRI Q++C +CQGSGL+ K ARKC ACGGFLPW W+RF + IGNGG ++ P D E A+++R+A Sbjct: 85 IEPWQLYFGFFAGIAPFIIAAYEFGKRILIQRKCALCQGSGLI------KKGEYARKCTACGGFLPWESWERFLDVGTTAKIGNGGRVRVPEGQTSVFYDVEKTVLASEKRKA 191
BLAST of NO27G01150 vs. NCBI_GenBank
Match: PSC75045.1 (hypothetical protein C2E20_1799 [Micractinium conductrix]) HSP 1 Score: 93.6 bits (231), Expect = 8.800e-16 Identity = 46/85 (54.12%), Postives = 53/85 (62.35%), Query Frame = 0 Query: 127 QLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRP 212 ++WVGF+AGV PFI A EF KRI Q+RC C G GLV G+ L RKC CGG LPW GWK F+ S GNGG L +P Sbjct: 125 EIWVGFVAGVVPFIIATVEFTKRIIIQRRCPACSGRGLVQR---GRYL---RKCPECGGLLPWLGWKEFFFSTATPGNGGPLLQP 203
BLAST of NO27G01150 vs. NCBI_GenBank
Match: XP_005644785.1 (hypothetical protein COCSUDRAFT_54440 [Coccomyxa subellipsoidea C-169] >EIE20241.1 hypothetical protein COCSUDRAFT_54440 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 92.0 bits (227), Expect = 2.600e-15 Identity = 48/107 (44.86%), Postives = 57/107 (53.27%), Query Frame = 0 Query: 122 EVTPEQLWVGFIAGVFPFIWAGYEFWKRIDTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNLDIGNGGVLQRPAPDYEALSEAAKRRRAG 229 EV PE +WVG IA PF+ +EF KRI Q+RC CQGSGLV ARKC CGGF PW GW +F+ S GNGG L+ P + +R G Sbjct: 31 EVGPE-IWVGTIAACVPFVIGSWEFGKRIIIQRRCSRCQGSGLVMRG------QFARKCPDCGGFFPWQGWWKFFTSTAAPGNGGPLRAPKGQSSVFYKVPSKRENG 130 The following BLAST results are available for this feature:
BLAST of NO27G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01150 ID=NO27G01150|Name=NO27G01150|organism=Nannochloropsis oceanica|type=gene|length=1068bpback to top protein sequence of NO27G01150.2 >NO27G01150.2-protein ID=NO27G01150.2-protein|Name=NO27G01150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=210bpback to top protein sequence of NO27G01150.1 >NO27G01150.1-protein ID=NO27G01150.1-protein|Name=NO27G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=235bpback to top Synonyms
Publications
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