NO26G01670, NO26G01670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01670 vs. NCBI_GenBank
Match: XP_005854767.1 (hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526] >XP_005855415.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU20946.1 hypothetical protein NGA_0115601 [Nannochloropsis gaditana CCMP526] >EKU21594.1 hypothetical protein NGA_0115602 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 119.8 bits (299), Expect = 2.400e-23 Identity = 81/268 (30.22%), Postives = 122/268 (45.52%), Query Frame = 0 Query: 45 CVRCRVGKMKCDGTYPCHRCWRLSLPCRIQKGKGTEHLSTVDMVIERTDPTALTELYLRAFRQVQSEGKIERQKAVCMLRTWHSLSLLVGRDITWGIAHQVAHILAITAFEVEGXXXXXXXXXLPDYTRNQRAKEEADGMLHS--VSELKETPTFQSLDQGALGVGKVGFLLTSMDGSRLIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKAFFTNLNTTCTYVFKCFDKQGDISLFLFTHRPLSLPP 311 C CR + KC G +PC RC RLS+ C K E + ++ V+ P E+YL+AF ++ GKI R A+ L+ W LS L G D+T G+A V ++A E+E P + R QR ++ +LKET F+ ++G + L+ + S + A N + + E ++R+ + LMA APEDR +V+ F + T T FK +DK G + L L T R + L P Sbjct: 54 CYACRASRTKCSGGFPCARCSRLSVCCLPNNWKREEPI--LEYVLTTHSPKPFAEMYLQAFERLFIAGKIRRDSALRTLKMWEFLSSLAGADVTLGVASHVQKRFNVSAIELEEPMRMLQDP--PSHVRYQRLQQYQSSAASQARTQQLKETEIFKRENEGT-RASRASLLMFVTNRSTMWAACNEFHAARLKEATELWDKALQRKLIWSYLMAPLYAPEDRRTYIDNIVEMIFGHEKLTKTMFFKMYDKDGSVKLCLHTARTIRLGP 316
BLAST of NO26G01670 vs. NCBI_GenBank
Match: EWM20744.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 117.9 bits (294), Expect = 8.900e-23 Identity = 92/322 (28.57%), Postives = 153/322 (47.52%), Query Frame = 0 Query: 29 SHPWQKQSRAPKLLHTCVRCRVGKMKCDGTYPCHRCWRLSLPCR---IQKG-----KGTEHLST-------VDMVIERTDPTALTELYLRAFRQVQSEGKIERQKAVCMLRTWHSLSLLVGRDI--TWGIAHQVAHILAITAFEVEGXXXXXXXXXLPDYTRNQRAKEEADGML-HSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGSRLIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKAFFTNLNTTCTYVFKCFDKQGDISLFLFTHRPLSLPPSLRPAFALLVEPAPPSRYLSGR 333 +H ++ SR +C C + K CD +PC RC+R + PCR + +G +GT S +D+VIER+D A+ LYL+AF+ + EG + R++A+ +L++W L +++ D T+G +V I E+E L + + AD +L L+E + + + V + MD SN ++ FR E +D+ +R+ + L A+ +APEDRL F L A + T K FD+QG ++L+L H+ + + P+ A + EPAPPSR+++ R Sbjct: 102 THKKRRASRIRSRERSCRVCYLEKASCDRNFPCGRCFRYNKPCRPATVTQGSRRPVRGTSSSSLLFQSSPYLDLVIERSDLPAMVPLYLQAFQDLFQEGVLNRKRAIGLLKSWVDLGVMMDGDCDPTFGAFAEVKAAFQINDLELEDPECLAYEPPL-HAEKGRLWAARADRVLGEGAKHLEENLVCRQANNSSRAV-----YMARMDCKDQWVISNKAHNTYFRSPAEFMQDMWKRRCLLAFLFAAGVAPEDRLAYFKLLHFATLSTSLMKRTAFLKIFDRQGRMTLYLSDHQVVKMGPN-EYASLCVTEPAPPSRHVTTR 416
BLAST of NO26G01670 vs. NCBI_GenBank
Match: EWM23204.1 (c6 transcription [Nannochloropsis gaditana]) HSP 1 Score: 117.9 bits (294), Expect = 8.900e-23 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0 Query: 34 KQSRAPKLLHTCVRCRVGKMKCDGTYPCHRCWRLSLPCRIQKGKGTEHLSTVDMVIERTDPTALTELYLRAFRQVQSEGKIERQKAVCML 124 K+ RAP+LL TCVRCR GK+KCDG YPC RCWRLSLPCR+Q+ + +V++R DP AL LY+RAF Q++ EGKI R+KA+ ML Sbjct: 32 KRKRAPRLLCTCVRCRTGKIKCDGNYPCARCWRLSLPCRVQRLDSWASTPLMQLVVDRGDPLALKSLYMRAFCQLEEEGKILRKKALDML 121
BLAST of NO26G01670 vs. NCBI_GenBank
Match: EWM30665.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 98.2 bits (243), Expect = 7.300e-17 Identity = 81/356 (22.75%), Postives = 153/356 (42.98%), Query Frame = 0 Query: 45 CVRCRVGKMKCDGTYPCHRCWRLSLPCR----------------------IQKGKGTEHLS---------------------------------TVDMVIERTDPTALTELYLRAFRQVQSEGKIERQKAVC----------MLRTWHSLSLLVGRDITWGIAHQVAHILAITAFEVEGXXXXXXXXXLPDYTRNQRAKEEADGMLHSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGSRLIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKA-----FFTNLNTTCTYVFKCFDKQGDISLFLFTHRPLSLPPSLRPAFALLVEPAPPSRYLS 331 C+RCR K+ C G+ PC RC+ LSL CR +++ +G++H S ++++ +R DP L +YL + +V++ E+ KA ++RTW S +VG D +WG+A +VA +L + + E L +++++ D + + + ++++ P F++L + L + +++ +N +D FRG + + D++ R+TM +L ++PEDR ++++A N T +FK +G+I LFL R LP + A+ +EP P S +++ Sbjct: 63 CMRCRKLKVHCTGSLPCLRCFHLSLVCRPQVPRPYKGNDSAEDCRCPSEKVKRARGSKHSSCTGVRKRGGDQRNKKDVEDALAIAMRAETDRTILLELIFDRMDPRPLAGIYLDSIMEVKTWD--EKSKAALSTLRTSWFANLIRTWWLHSTVVGADTSWGMAREVALLLNFSPIDFEDTERLHLDYPLS--VMRKQSEKFRDFVANGMLQIQQHPAFKAL-LAEVPPSTAIHLTCNTPNGLMLEVTNDAFDTYFRGADRMYNDIVLRKTMPCILYLGLVSPEDRREWTRFMIEAVSKGPLNANGEWRKTQIFKLVCTEGNIQLFLVKAR--FLPSVGTGSVAITLEPCPRSNHVT 411
BLAST of NO26G01670 vs. NCBI_GenBank
Match: EWM21361.1 (hypothetical protein Naga_100666g2 [Nannochloropsis gaditana]) HSP 1 Score: 93.6 bits (231), Expect = 1.800e-15 Identity = 69/234 (29.49%), Postives = 114/234 (48.72%), Query Frame = 0 Query: 101 YLRAFRQVQSEGKIERQKAVCMLRTWHSLSLLVGRDITWGIAHQVAHILAITAFEVEGXXXXXXXXXLPDYTRNQ-RAKEEADGMLHSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGSRLIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKAFFTNLNT-TCTYVFKCFDKQGDISLFLFTHRPLSLPPSLRPAFALLVEPAPPSRYLSGR 333 + + R+ SEG I+R++ + +R W LS+LVG D+TWG+A +V + I+A +VE P +R + RA+EE ++ V E++ P ++ L V L + G RL+Q +N +D++ G +T LL+A +AP+DR F ++A F T++ K F GDI L + + RP+ + +L E AP S+ L+ R Sbjct: 3 FYKVRREFGSEG-IDRRRVIECMRIWQHLSILVGGDVTWGMADKVGRSMGISAVDVEDNASVALG---PTRSRRKGRAQEEVAILVRLVDEVRTMPDYKIL--ARTQHESVPTFLGLLAGERLVQVTNAAFDRMVEGAGRIMSSAFVHRTTCILLLAQLVAPDDRSTFFEGFIQALFVPSRCFKSTFLLKWFQGDGDIRLCIVSFRPVKV--GHLSGVQILFEAAPQSKRLTSR 228
BLAST of NO26G01670 vs. NCBI_GenBank
Match: EWM20703.1 (hypothetical protein Naga_101787g1 [Nannochloropsis gaditana]) HSP 1 Score: 92.8 bits (229), Expect = 3.100e-15 Identity = 66/218 (30.28%), Postives = 106/218 (48.62%), Query Frame = 0 Query: 97 LTELYLRAFRQVQSEGKIERQKAVCMLRTWHSLSLLVGRDITWGIAHQVAHILAITAFEVEGXXXXXXXXXLPDYTRNQRA------------KEEADGMLHSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGSR-LIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKAFFTNLNTTCTYVF-KCFDKQGDISLFL 301 + + +L+AF +V EG ++R K + ML W ++S++ D++ G+ +A +L + + ++ + QRA +E G S S LKE+ + D G V L+ MDG L+Q +N YDK+ G + H +R++T+Q LLMAS I+P+DR L F L + FT+ V K FD QG + L+L Sbjct: 1 MAQEFLQAFTRVHREGDLDRAKVIQMLNIWQNMSIIAAADVSCGLTRAIAELLHLPSTDLALLPPFLPPFLASRAFQTQRAALILHARERAARAKEGKG---SQSLLKESVAWMMADDGV-----VPLLMMCMDGPHMLLQTTNRPYDKLVAGAQSLHEHCLRKKTIQFLLMASLISPDDRSLWFRCLAHSLFTSERYRHVAVLVKLFDAQGQMRLYL 210
BLAST of NO26G01670 vs. NCBI_GenBank
Match: XP_005855698.1 (hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526] >EKU20665.1 hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 87.4 bits (215), Expect = 1.300e-13 Identity = 69/259 (26.64%), Postives = 119/259 (45.95%), Query Frame = 0 Query: 84 TVDMVIERTDPTALTELYLRAFRQVQSEGKIERQKAVCMLRTWHSLSLLVGR--DITWGIAHQVAHILAITAFEVEGXXXXXXXXXLPDYTRNQRAKEEADGMLHSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGSRLIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKAFFTNLNTTCTYVFKCFDKQGDISLFLFTHRPLSLPPSLRPAFALLVEPAPPSRYLS-----GRSRP 336 ++D ++E D A+ LYL+AFR++ +G + R++ + +L+ W + + G D T G+ +V I E+ G + D R + A+ + K F+ L+ G+ + + + G N +Y FR EE +D R+ + L+A+ + P+DR F LV+ N T T +FK D+ ++LFLF +R + L P ++ EPAPPSR++ R+RP Sbjct: 125 SLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKEL-GSPSSILDGAVSDAERRRLWMSHANRL--GGEGAKSDAIFKQLNDGSRAI-----RMECLGGKERRLVVNDVYLTYFRRPEEFMKDAWARRCLIGFLLAATVVPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPG-EFVSLIMFEPAPPSRHIPPQHPVARTRP 374
BLAST of NO26G01670 vs. NCBI_GenBank
Match: EWM20491.1 (hypothetical protein Naga_100382g3 [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 2.100e-11 Identity = 90/328 (27.44%), Postives = 127/328 (38.72%), Query Frame = 0 Query: 76 GKGTEHLSTVDMVIERTDPTALTELYLRAFRQVQSEGKIERQKAVCMLRTWHSLSLLVGRDITWGIAHQVAHILAITAFEVE---GXXXXXXXXXLPD------YTRNQ---------------------RAKEEADGMLHSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGS--RLIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKAFFTNLNTTCTYVF-----------------------KCFDKQGDISLFLFTHRPLSLPPSLRPA------FALLVEPAPPSRYLSGRSRPSYQGMHT 343 GKG L T ++ER D + E +L AF VQ GKI R+ V MLR W LS L G D+T GI +A+ L + A+E++ G D +T N +EE + + LK +P F+ D G G LL +D + R+I ASN Y +F G + + R ++ L A+F+A DR F NL C+ F K F + G + L+ R L S+R F L +EP P SRY++ R + Q T Sbjct: 29 GKGQSLLGT---ILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTVKRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDD-----GYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFR-------MNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVR--LYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKTTQSKTT 339
BLAST of NO26G01670 vs. NCBI_GenBank
Match: EWM30609.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 73.2 bits (178), Expect = 2.500e-9 Identity = 72/297 (24.24%), Postives = 108/297 (36.36%), Query Frame = 0 Query: 44 TCVRCRVGKMKCDGTYPCHRCW-RLSLPCR---------------------------------IQKGKGTEHLST------VDMVIERTDPTALTELYLRAFRQVQSEGK----------------IERQKAVCMLRTWHSLSLLVGRDITWGIAHQVAHILAITAFEV------EGXXXXXXXXXLPDYTRNQRAKEEADGMLHSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGSRLIQASNGLYDKIFRGVEESHRDVMRRQTMQELLMASFIAPEDRLLLFLYLVKAFFTN 279 TC CR K KCDG +PC RCW R+ + CR +++ K E + V +V R+ P L E++LR F ++ E + +R KAV +LR W S VG D+T GI + + +T E+ EG A E G V LL DG+ L N +D++F V + M R+ + LL A+ + P+DR + F +++A FT+ Sbjct: 124 TCQLCRESKTKCDGAFPCSRCWNRMCVCCRPQQHTLESVAPSPXXXXXXXXXXXXLPEEVTDLLEEEKQDEAMEVAGSTPYVHLVFLRSRPQPLVEVFLRTFGEMYLEEQRGGARAGGEGGRDGRGFDRGKAVRLLRCWQERSTYVGTDVTHGILPALTGLFQVTGEELGEGGDKEGGTEGGAGAHPQSTEAMLVAAERLRGSWAXXXXXXXXXXXXXXXXXXXXXXXV--LLAVSDGTLLHWVGNAAFDRLFLSVAGLLNESMARRRLPILLFAALLHPQDRPVWFRGVIRALFTS 418
BLAST of NO26G01670 vs. NCBI_GenBank
Match: XP_005852496.1 (hypothetical protein NGA_0710100 [Nannochloropsis gaditana CCMP526] >EKU23335.1 hypothetical protein NGA_0710100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 69.7 bits (169), Expect = 2.800e-8 Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 0 Query: 82 LSTVDMVIERTDPTALTELYLRAF----RQVQSEGKIERQKAVCMLRTWHSLSLLVGRDITWGIAHQVAHILAITAFEVEGXXXXXXXXXLPDYTRNQ-RAKEEADGMLHSVSELKETPTFQSLDQGALGVGKVGFLLTSMDGSRLIQASNGLYDK 233 LS ++ + R +P L+ Y+ F R+ SEG I+R++ + +R W LS+LVG D+TWG+A +V + I+A +VE P +R + RA+EE ++ V E++ P ++ L V L + G RL+Q +N +D+ Sbjct: 94 LSLTELALARHNPQRLSAEYVMCFYKVRREFGSEG-IDRRRVIECMRIWQHLSVLVGGDVTWGMADKVGRSMGISAVDVEDTASVALG---PTRSRRKGRAQEEVAILVRLVDEVRTMPDYKIL--ARTQDESVPTFLGLLAGERLVQVTNAAFDR 243 The following BLAST results are available for this feature:
BLAST of NO26G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01670 ID=NO26G01670|Name=NO26G01670|organism=Nannochloropsis oceanica|type=gene|length=3724bpback to top protein sequence of NO26G01670.1 >NO26G01670.1-protein ID=NO26G01670.1-protein|Name=NO26G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=481bpback to top Synonyms
Publications
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