NO26G00860, NO26G00860 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00860 vs. NCBI_GenBank
Match: EWM23129.1 (Putative repair protein [Nannochloropsis gaditana]) HSP 1 Score: 317.0 bits (811), Expect = 6.100e-83 Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0
Query: 97 SRQRFFEGFISAAGGMLAISTASSPLPSWARPEGVNRPELLPKEPTNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVPQGVDEEEG 288
SR F G SA G+L I T S P WARPEGVN+PELLPKE +NVIDLERFLTSGQKKRL+ QL++LEKD+GIKVRLLCQRYPDTPGLAIKD+W LDDKSIV+V DKGPANIKQVATRNL+NFNVGSGLQLLLPPAFWNR+RS+FGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVP+G EEEG
Sbjct: 108 SRHGFLGGLFSA--GLLTIGTFSLQ-PVWARPEGVNKPELLPKERSNVIDLERFLTSGQKKRLSQQLDALEKDSGIKVRLLCQRYPDTPGLAIKDYWGLDDKSIVVVADKGPANIKQVATRNLLNFNVGSGLQLLLPPAFWNRLRSQFGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVPKGAAEEEG 295
BLAST of NO26G00860 vs. NCBI_GenBank
Match: XP_005854163.1 (hypothetical protein NGA_0170500 [Nannochloropsis gaditana CCMP526] >EKU22196.1 hypothetical protein NGA_0170500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 302.4 bits (773), Expect = 1.600e-78 Identity = 144/165 (87.27%), Postives = 157/165 (95.15%), Query Frame = 0
Query: 129 EGVNRPELLPKEPTNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVPQGVDEEEGVFSFLK 294
E ++PELLPKE +NVIDLERFLTSGQKKRL+ QL++LEKD+GIKVRLLCQRYPDTPGLAIKD+W LDDKSIV+V DKGPANIKQVATRNL+NFNVGSGLQLLLPPAFWNR+RS+FGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVP+G EEEGVFSFLK
Sbjct: 23 EDSSQPELLPKERSNVIDLERFLTSGQKKRLSQQLDALEKDSGIKVRLLCQRYPDTPGLAIKDYWGLDDKSIVVVADKGPANIKQVATRNLLNFNVGSGLQLLLPPAFWNRLRSQFGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVPKGAAEEEGVFSFLK 187
BLAST of NO26G00860 vs. NCBI_GenBank
Match: CBN75528.1 (thylakoid lumen 15.0 kDa protein [Ectocarpus siliculosus]) HSP 1 Score: 198.0 bits (502), Expect = 4.200e-47 Identity = 101/183 (55.19%), Postives = 132/183 (72.13%), Query Frame = 0
Query: 99 QRFFEGFISAAGGMLAISTASSPLPSWARPEGVNRPELLPKEPTNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKG--CVDVP 280
QR G I AG L A +PL + AR GVNRP+LLPKE TNVIDL LT GQ KR+N QLE LEK TG ++RLLCQ+YP+TPGLA+KD+WK+DDK+IVMVVD G + K A N++NFNVG GL+L LPP FW R+++++G+ F++R +G D AII+ +++I C+R + CVD P
Sbjct: 71 QRAAAGLI-GAGVALPALVAVAPLEAQARKAGVNRPDLLPKEQTNVIDLVSMLTKGQVKRINKQLEDLEKATGYRLRLLCQKYPETPGLAVKDYWKVDDKTIVMVVDSGDDDRKSGAV-NILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPP 251
BLAST of NO26G00860 vs. NCBI_GenBank
Match: XP_005829597.1 (hypothetical protein GUITHDRAFT_95599 [Guillardia theta CCMP2712] >EKX42617.1 hypothetical protein GUITHDRAFT_95599 [Guillardia theta CCMP2712]) HSP 1 Score: 189.1 bits (479), Expect = 1.900e-44 Identity = 92/185 (49.73%), Postives = 128/185 (69.19%), Query Frame = 0
Query: 106 ISAAGGMLAISTASSPLPSWAR-----PEGVNRPELLPKEP-TNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKGCVDVPQGVDE 285
++A LA +A +P +R PEGVNRP+LLP P NVIDLE+FLT GQ +++ L LE+DTG K+R+LCQRYP TPGLAIKD+W +DDK+IVMVVD+G Q N++NFNVG G++L LPP FW R+R+ FG++FY++ +G+D A+I ++ + C+R C DVP+ + E
Sbjct: 81 LAAPSQALADLSAGRSVPLGSRERGRGPEGVNRPDLLPPGPKVNVIDLEKFLTKGQVAKMDKLLAKLEEDTGYKMRVLCQRYPQTPGLAIKDYWGVDDKTIVMVVDRGSGKAGQA---NILNFNVGQGVELALPPVFWTRLRNFFGTVFYVKENGEDAAVINAVDAVVGCLRQGFCTDVPKEMKE 262
BLAST of NO26G00860 vs. NCBI_GenBank
Match: XP_005790231.1 (hypothetical protein EMIHUDRAFT_440267 [Emiliania huxleyi CCMP1516] >EOD37802.1 hypothetical protein EMIHUDRAFT_440267 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 187.2 bits (474), Expect = 7.300e-44 Identity = 91/171 (53.22%), Postives = 125/171 (73.10%), Query Frame = 0
Query: 112 MLAISTASSP-LPSWARPEGVNRPELLPKEPT-NVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLK-GCVDVP 280
+LA + S+P LP+ ARPEGVN+PELLP P VIDL++FLTSG++ +++ QL +E +TG K+R+LCQ+YP+TPGLAIKD+W LDDKSIV+V DKG T N++NFNV G +L LP FW R++S FG+ F+++ +G+D AI ++ ID C+R GCVDVP
Sbjct: 17 VLAAALTSAPSLPALARPEGVNKPELLPTGPVQRVIDLQKFLTSGERTKMDTQLAKIEAETGFKLRVLCQQYPNTPGLAIKDYWGLDDKSIVLVADKGTK-----GTSNMLNFNVAEGAKLQLPNTFWTRLQSTFGNTFFVKENGEDVAIRRAVDAIDYCLREDLGCVDVP 182
BLAST of NO26G00860 vs. NCBI_GenBank
Match: XP_002178007.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50821.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 174.1 bits (440), Expect = 6.400e-40 Identity = 96/196 (48.98%), Postives = 128/196 (65.31%), Query Frame = 0
Query: 96 VSRQRFFEGFISAAGGMLAIST--ASSPLPSWARPEGVNRPELLPKEP-TNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKL------DDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKG--CVDVPQ 281
V+R+ F IS A LA+ T A + LP+WAR E V+RP+LLP E NVI E+FLTSGQ KR+N L +LE+DTG +VR+LCQ YP+TPGLAI+D+W L DDK +V+VVD+ N++NFNVG GL+ LP FWNR+ S++G+ FY+R +G D A+ I I TC+R + CV VP+
Sbjct: 52 VTRRSAFSTAISRA---LAVGTVAAGTTLPAWARLESVDRPDLLPAEKGVNVIQTEKFLTSGQAKRMNDLLVALERDTGFRVRVLCQSYPNTPGLAIRDYWDLGKEGQKDDKYVVLVVDQFGGR------GNVLNFNVGDGLKFALPNVFWNRLSSKYGTTFYVRDNGIDLAVTNAIEAIVTCLRSEDQYCVSVPE 238
BLAST of NO26G00860 vs. NCBI_GenBank
Match: GAX81128.1 (hypothetical protein CEUSTIGMA_g8562.t1 [Chlamydomonas eustigma]) HSP 1 Score: 169.1 bits (427), Expect = 2.100e-38 Identity = 75/163 (46.01%), Postives = 117/163 (71.78%), Query Frame = 0
Query: 109 AGGMLAISTASSPLPSWARPEGVNRPELLPKEPTNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIR 272
A G+L++S S P+ + ARPEGVNRP+LLPKE T VID+ FLT ++ R+ A++ESLE+DTG K+R+L Q YP+TPGLA++D+W +DD+SIV V D +N++NFNVG + L +P +FW+R+ ++G+ FY + G+ ++I+ ++ +D+C+R
Sbjct: 58 ASGLLSLSLLSMPMDATARPEGVNRPDLLPKEFTTVIDVAGFLTPSEENRIKAEVESLERDTGYKLRVLAQNYPETPGLAVRDYWNVDDRSIVFVADP--------TFQNILNFNVGGTVDLDVPQSFWSRLSGKYGNKFYWQEKGEAKSILDAVSAVDSCLR 212
BLAST of NO26G00860 vs. NCBI_GenBank
Match: GAX26586.1 (hypothetical protein FisN_21Lh051 [Fistulifera solaris]) HSP 1 Score: 165.2 bits (417), Expect = 3.000e-37 Identity = 89/192 (46.35%), Postives = 126/192 (65.62%), Query Frame = 0
Query: 97 SRQRFFEGFISAAGGMLAISTASSPLPSWARPEGVNRPELLPKEP-TNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKL------DDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKG--CVDVP 280
SR+ +IS ++ +T +P P+ AR E VNRP+LLP E NVI E+FLT+GQ +R+N L++LE+DTG +VR+LCQ YP+TPGLAI+D+W L DDK IV+VVD+ N++NFNVG G++L LP FW R++++FG+ FY+R +G D AI + I TC+R + CV+VP
Sbjct: 28 SRRTVIASWISGGAAVVTGATTLTP-PANARLEAVNRPDLLPTEAGLNVIQTEKFLTAGQARRMNDLLKALERDTGFRVRVLCQAYPNTPGLAIRDYWDLGKEGQKDDKYIVLVVDQFGGK------GNVLNFNVGDGVKLNLPNVFWTRLQAKFGNTFYVRDNGIDLAITNAVEAITTCLRSEDQYCVNVP 212
BLAST of NO26G00860 vs. NCBI_GenBank
Match: GAX23264.1 (hypothetical protein FisN_21Hh051 [Fistulifera solaris]) HSP 1 Score: 164.9 bits (416), Expect = 3.900e-37 Identity = 90/193 (46.63%), Postives = 128/193 (66.32%), Query Frame = 0
Query: 97 SRQRFFEGFISAAGGMLAISTASS-PLPSWARPEGVNRPELLPKEP-TNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKL------DDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKG--CVDVP 280
SR+ +IS GG ++ A++ P++AR E VNRP+LLP E NVI E+FLT+GQ +R+N L++LE+DTG +VR+LCQ YP+TPGLAI+D+W L DDK IV+VVD+ N++NFNVG G++L LP FW R++++FG+ FY+R +G D AI + I TC+R + CV+VP
Sbjct: 28 SRRTVIASWIS--GGAAVVTGATTLASPAYARLEAVNRPDLLPTEAGLNVIQTEKFLTAGQARRMNDLLKALERDTGFRVRVLCQAYPNTPGLAIRDYWDLGKEGQKDDKYIVLVVDQFGGK------GNVLNFNVGGGVKLNLPNVFWTRLQAKFGNTFYVRDNGIDLAITNAVEAITTCLRSEDQYCVNVP 212
BLAST of NO26G00860 vs. NCBI_GenBank
Match: XP_005707417.1 (thylakoid lumen 15.0 kDa protein [Galdieria sulphuraria] >EME30897.1 thylakoid lumen 15.0 kDa protein [Galdieria sulphuraria]) HSP 1 Score: 164.5 bits (415), Expect = 5.100e-37 Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 0
Query: 127 RPEGVNRPELLPKEPTNVIDLERFLTSGQKKRLNAQLESLEKDTGIKVRLLCQRYPDTPGLAIKDFWKLDDKSIVMVVDKGPANIKQVATRNLMNFNVGSGLQLLLPPAFWNRVRSRFGSIFYLRSHGDDEAIIATINTIDTCIRLKGC 276
RPEGVN+P LLPKE VIDLE +LTSGQ K L Q+E LE+ +G K+R+L QRYPDTPGLAIKD+W+LD +S+VMV D + NL+ FNVGS L LLPP +W+ + S++G+ F++ +G+D AI+ + I +CI KGC
Sbjct: 69 RPEGVNKPNLLPKEKKLVIDLEHYLTSGQLKSLERQIEDLERRSGFKLRVLTQRYPDTPGLAIKDYWQLDSRSVVMVADFFG------NSGNLLKFNVGSDLDGLLPPRYWSLLSSKYGNKFFVEQYGEDRAILDAADNIFSCILQKGC 211 The following BLAST results are available for this feature:
BLAST of NO26G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00860 ID=NO26G00860|Name=NO26G00860|organism=Nannochloropsis oceanica|type=gene|length=2382bpback to top protein sequence of NO26G00860.1 >NO26G00860.1-protein ID=NO26G00860.1-protein|Name=NO26G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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