NO26G00080, NO26G00080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00080 vs. NCBI_GenBank
Match: OQR83287.1 (RING-finger-containing E3 ubiquitin ligase [Achlya hypogyna]) HSP 1 Score: 161.0 bits (406), Expect = 1.700e-35 Identity = 82/220 (37.27%), Postives = 120/220 (54.55%), Query Frame = 0 Query: 524 TFFCNICLSNLPDSLRMEHSGP-GACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQDG---CGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFS 736 T +C ICL + + + + P AC H FC +C+ GY+A+ I V+ C DG CG + + DI+ LV D + KY+KF ++ RECP ++ RG P + C CH FC+ HSNAHP ++C +Y +MR + + ++ + IS+ CP C +P EK GGCN + C C +CWLCG DG H++ +N+ GC GAQ S Sbjct: 141 TSYCQICL----EYVNVHTTFPLSACGHRFCVECLNGYLASKIKDGLVTPQCFFTAADGAPPCGVAIATSDIQALVPVDLFDKYEKFKFIKTHADARECPYCHHVQVGRG-PDDPVIDCAACHETFCYTHSNAHPTSTCLEYEAKMRAEEKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMS 355
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_012212395.1 (hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65] >KDO16895.1 hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 159.1 bits (401), Expect = 6.600e-35 Identity = 82/218 (37.61%), Postives = 115/218 (52.75%), Query Frame = 0 Query: 524 TFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQDG--CGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFS 736 T +C ICL + + + S C H FC DCI GY+A+ IS V+ C DG C DI+ LV D + KY+KF ++ RECP ++ G P + C C FC+ HSNAHPH++C +Y +MR + + ++ + IS+ CP C +P EK GGCN + C C +CWLCG DG H++ +N+ GC GAQ S Sbjct: 12 TSYCQICLEYVDVASTVALS---VCGHRFCADCIHGYLASKISDGLVAPKCFFADGDGRPCEALIPPSDIQALVSTDVFEKYEKFNFIKAHADARECPHCHVLQVGNG-PDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMS 225
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_012206935.1 (hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65] >KDO22412.1 hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 159.1 bits (401), Expect = 6.600e-35 Identity = 82/218 (37.61%), Postives = 115/218 (52.75%), Query Frame = 0 Query: 524 TFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQDG--CGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFS 736 T +C ICL + + + S C H FC DCI GY+A+ IS V+ C DG C DI+ LV D + KY+KF ++ RECP ++ G P + C C FC+ HSNAHPH++C +Y +MR + + ++ + IS+ CP C +P EK GGCN + C C +CWLCG DG H++ +N+ GC GAQ S Sbjct: 51 TSYCQICLEYVDVASTVALS---VCGHRFCADCIHGYLASKISDGLVAPKCFFADGDGRPCEALIPPSDIQALVSTDVFEKYEKFNFIKAHAGARECPHCHVLQVGNG-PDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMS 264
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_008604055.1 (hypothetical protein SDRG_00360 [Saprolegnia diclina VS20] >EQC42632.1 hypothetical protein SDRG_00360 [Saprolegnia diclina VS20]) HSP 1 Score: 151.4 bits (381), Expect = 1.400e-32 Identity = 77/218 (35.32%), Postives = 113/218 (51.83%), Query Frame = 0 Query: 524 TFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPCPMLGQDG--CGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFS 736 T +C ICL + + + S C H FC DCI GY+A I+ ++ C DG C D++ LV + + KY+KF ++ RECP ++ G P + C C FC+ HSNAHP+++C Y +MR + + ++ + IS+ CP C +P EK GGCN + C C +CWLCG DG H++ +N+ GC GAQ S Sbjct: 163 TSYCQICLEYVDIASTVALS---VCGHRFCADCIHGYLANKIADGLIAPKCFFADSDGHPCEAVIPPSDVQALVSTEVFEKYEKFKFIKAHADARECPHCHLLQVGNG-PDDPHMDCMQCGESFCYTHSNAHPNSTCLAYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMS 376
BLAST of NO26G00080 vs. NCBI_GenBank
Match: OQR96619.1 (RING-finger-containing E3 ubiquitin ligase, partial [Thraustotheca clavata]) HSP 1 Score: 145.2 bits (365), Expect = 9.800e-31 Identity = 81/234 (34.62%), Postives = 114/234 (48.72%), Query Frame = 0 Query: 513 VKPVQQMSPQPTFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPC---PMLGQD----GCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFS 736 V + M T +C ICL + S S AC H FC +CI Y+ + I+ + C P D C + DI+ LV + KY+KF ++ RECP ++ RG P + C C FC+ HSNAHP TSC +Y ++MR + + ++ + IS+ CP C P EK GGCN + C C +CWLCG G H++ +N+ GC GAQ S Sbjct: 445 VSSILGMGMAETTYCQICLEYVDVSSTYPLS---ACGHRFCVECINAYLESKINDGLIHPKCFYMPTATGDTEAQPCQVLITSDDIQTLVSTSVYEKYEKFKFVKTHADARECPFCNFVQVGRGPN-DPVMECIKCSKIFCYTHSNAHPTTSCIEYEVKMRAEEKINQAKISQISKPCPGCKNPVEKNGGCNQMKCIQCGCHFCWLCGKKVDGGVFPEHFQWWNLRGCAGAQMS 674
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_009826534.1 (hypothetical protein H257_03923 [Aphanomyces astaci] >ETV84842.1 hypothetical protein H257_03923 [Aphanomyces astaci]) HSP 1 Score: 143.7 bits (361), Expect = 2.900e-30 Identity = 76/225 (33.78%), Postives = 111/225 (49.33%), Query Frame = 0 Query: 524 TFFCNICLSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPC--PMLGQDG------CGYSYSEQDIKLLVDG-DTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIFGCPGAQFS 736 T +C ICL + + + AC H FC +C+ GY+ + I+ V C +DG C + D++ L+ D W KY+KF ++ RECP C + +P +SC C +CF HSNAHP SC Y R + + + + I++ CP C +P EK+GGCN + C C +CWLCG DG H++ +N+ GC GAQ S Sbjct: 165 TCYCQICLEYVDVATTI---ALDACGHRFCIECLEGYVTSKITDGMVYPTCFFAFPPEDGGAVPSTCHAAIQATDLRALITSEDVWAKYEKFKFNKEHANARECPH--CHHVQVSAAANPTISCDACRQVYCFSHSNAHPGMSCADYEKARRAEDKLNHAKISQIAKFCPGCKSPVEKSGGCNQMKCITCGINFCWLCGQEVGDGVFPEHFQWWNLAGCAGAQMS 384
BLAST of NO26G00080 vs. NCBI_GenBank
Match: ETO06363.1 (hypothetical protein RFI_31032 [Reticulomyxa filosa]) HSP 1 Score: 139.8 bits (351), Expect = 4.100e-29 Identity = 86/242 (35.54%), Postives = 126/242 (52.07%), Query Frame = 0 Query: 522 QPTFFCNICLSN--LPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPC-PMLGQDG--CGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHP-HTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSD----GHYEVYNIFGCPGAQFSRL-GDV--PFPGFVVCLV 751 Q TFFC+IC N + + L++ + C+HTFC DCI+GY ++ I S V + C +G++ CG E DI VD K+ +F ++ R+CPK C G P ++C C+T +CF+HS AHP C Y RM K+ + ++ V ++ CPRC EK+GGCNH+ C C +CWLC D H++ N GC G QF + G+ P P ++V +V Sbjct: 95 QETFFCHICFMNNAVHEGLKLRN-----CNHTFCTDCIKGYWSSRIESGNVYLKCFHPIGENSEHCGKMVDELDILQTVDKSVQEKFHRFKENLENPNARQCPK--CQHTQTGDPNHPLMACEQCNTQYCFYHSAAHPIEERCEAYESRMLKEDKLNQE-VTKNAKGCPRCKYLIEKSGGCNHMKCIKCSCSFCWLCMQEIEDIPIPNHFKEGN-SGCSGKQFEGMEGEFGRPPPRWLVVIV 327
BLAST of NO26G00080 vs. NCBI_GenBank
Match: GAX93987.1 (RING-finger-containing E3 ubiquitin ligase, putative [Pythium insidiosum]) HSP 1 Score: 139.4 bits (350), Expect = 5.400e-29 Identity = 77/227 (33.92%), Postives = 112/227 (49.34%), Query Frame = 0 Query: 516 VQQMSPQPTFFCNICLSNLP--DSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPC-PMLGQDGCGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHT--SCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSD----GHYEVYNIFGCPGAQ 734 V+ + TF C IC +P + R++ AC H C+DC+ ++ A I V C G C + DI+ +V D WR+Y++F R+ R+CP + G + P C C FCF H +AH + +C + R+ + +QSR V +I++ CP C A EK GGCNHI C +C +CW+CGAT D H+ +NI GC G Q Sbjct: 13 VRGLDRSQTFLCLICCEQVPFHSAYRLQ-----ACGHRCCRDCLTSFLEARICDGHVYPQCFAYYGGRVCRVTIRPADIETVVSSDVWRRYERFKFNREHRNARQCPFCDHSQECSGPQ-DPRCVCAACKRVFCFLHGSAHDDSTDACIAFDRRLNQSDKQSRTFVESIAKPCPGCGASIEKNGGCNHIQCVSCHTSFCWICGATVQDVFNPTHFRWWNIGGCAGQQ 233
BLAST of NO26G00080 vs. NCBI_GenBank
Match: EWM24689.1 (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana]) HSP 1 Score: 138.7 bits (348), Expect = 9.200e-29 Identity = 69/160 (43.12%), Postives = 90/160 (56.25%), Query Frame = 0 Query: 586 YSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVR-GCRCSPALSCPDCHTHFCFFHSNAHP-----HTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDGHYEVYNIF-GCPGAQFSRLG 739 YSE ++ LVD D ++K+++ +R REC P C + G + P L C C FCF H+ AHP C +Y ++ + S+ V IS+ CP+C APTEK GGCNHI+CA C H+WCWLC Y+ HY NIF GCPGAQF G Sbjct: 62 YSENHLRALVDPDLFQKHEQRLKLRAQPSLREC--PACQAVCEGGSKRRPLLVCAACGLSFCFLHATAHPVGKEGGAGCRRYLRQVEATERASKTTVRRISKPCPKCKAPTEKNGGCNHISCAQCRHEWCWLCEQRYTPYHYSPTNIFLGCPGAQFVDFG 219
BLAST of NO26G00080 vs. NCBI_GenBank
Match: XP_005853674.1 (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526] >EKU22688.1 ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 136.7 bits (343), Expect = 3.500e-28 Identity = 73/243 (30.04%), Postives = 113/243 (46.50%), Query Frame = 0 Query: 526 FCNIC--LSNLPDSLRMEHSGPGACSHTFCQDCIRGYMAASISSRGVSIPC------PMLGQDG---------CGYSYSEQDIKLLVDGDTWRKYQKFCLMRQSDRYRECPKPGCGRMVRGCRCSPALSCPDCHTHFCFFHSNAHPHTSCWQYALRMRKDSQQSRRAVMAISRRCPRCSAPTEKTGGCNHITCANCLHQWCWLCGATYSDG----HYEVYNIF-GCPGAQFSRLGDVPFPGFV 747 FC +C + + R+ GAC H +C+ C Y+ IS + C G++G C E D+ LV +TW KY++F + R C P C G PA++C C FC+FH++AHP+ SC +Y +++ +++ + I++ CP C P EK+GGCN + C C WCWLCG +G H++ +N+ GCP Q + P P + Sbjct: 82 FCQVCREYERVSKTYRL-----GACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMC--PFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHI 317 The following BLAST results are available for this feature:
BLAST of NO26G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00080 ID=NO26G00080|Name=NO26G00080|organism=Nannochloropsis oceanica|type=gene|length=5268bpback to top protein sequence of NO26G00080.1 >NO26G00080.1-protein ID=NO26G00080.1-protein|Name=NO26G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=902bpback to top protein sequence of NO26G00080.2 >NO26G00080.2-protein ID=NO26G00080.2-protein|Name=NO26G00080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=878bpback to top Synonyms
Publications
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