NO25G02110, NO25G02110 (gene) Nannochloropsis oceanica

Overview
NameNO25G02110
Unique NameNO25G02110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5345
Alignment locationchr25:671406..676750 -

Link to JBrowse

Properties
Property NameValue
DescriptionSerine threonine-protein kinase smg1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:671406..676750 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0016310phosphorylation
GO:0016310phosphorylation
GO:0006468protein phosphorylation
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Vocabulary: Molecular Function
TermDefinition
GO:0004674protein serine/threonine kinase activity
GO:0016740transferase activity
GO:0016301kinase activity
GO:0005524ATP binding
GO:0004674protein serine/threonine kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR031559SMG1
Homology
BLAST of NO25G02110 vs. NCBI_GenBank
Match: EWM21711.1 (serine threonine-protein kinase smg1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 527.7 bits (1358), Expect = 1.300e-145
Identity = 460/1303 (35.30%), Postives = 600/1303 (46.05%), Query Frame = 0
Query:  486 SSCLHVWKRCLAADASS---PASSFPPSSSSSVSSMTNVRTLWARNFAELALRSVDEEEESKERGGNCREEEDVDPFTWLAEEVE----KEMEVGREEGVVIVDLWALSAAMAVVFAPRKDKDVIKNAEKEEEGGKRGQWLARARAQLLAREASCRALRCLNFMSPSSSSSSTSFCSAMVPF-SSALQGAFIELAMRLLRTCPRSQKGDFLPQLLEMVLPLPLAFVRGTSPVSSLPSPSLPPALSMVDEVLGQVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASALGNHRALGLALLGKLLRLSPLPFYS-SQSSAIPLSIKEESKRLDATTGLLIKAYNFVVLALRDPLPGLRPQALQTLALFHLLASSLPPSLPPSTFQGLPLGDVMLLQTEPLALLSSPFYRNPEHVRRLFDYLVGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSKRIGTDPTPVFLNRC-NIGGGCVGAS----VAAAEGGRESNVAVDDEPYFQWLQTLCLEATMGVLRNHMSTTVAGGGADGGAGTGAVAFPPPSASPAVALLQSCLGEMQEQIDILPEEGKHC---NNNSNNASNRTQVSSP-HPVLLAAHRLREQAGRSQSVSAVWAAWELARLVVSSRLKTHVGGPAATFAALERALVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTR----DGKEWKGDEKGGEGA-----XXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDLASAAKAEVAASS-----IPSLKL------LQEIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSLLRLTSSTRSSLPPFS-------SSILDPAIQSRARAAAVRLLQLARTTAVLRMVMDKSVMCYCFLGDWRGLGYFLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGALREIRKRKED-EEVLHIPDWLLAGLLPRVDPTLIQTWMRIDGRAWSLTAAASQHE----GGVEEASAGEGEAAEAII----TP-VPKSTRRPDLSSKEWLDMLSLLQQHATSSP-----PLPP 1729
            SS L +W+  LA ++ S   P +   PS S         +TLWAR   ELALR   E+EE   +G    +    D + WLA EVE         G  E V++++L ALSAA+AV   PR+ +      E+ E  G+ G+ LA+A+A+  A  A CRAL+ L F+            S  +P  S ALQ A ++LA RLLRT P S+  D LP LLE  +P  LA +R  S  ++  SP+    L  +D  LG +L                                                                                                +  ALG HR L L+L+GK+LRL P P  + + S               +T  LL +A   +V ALRDP+P +RP+ALQTLALF LL         PS      +GDV+LLQ EP+A   SPF R PE VRRLFDYL+G                              Q  R     +   L+R    GGG  G +                  DDEP+FQWL++LCL+A  GVLR       A G A              S S AV+LL++CLG+  + +      G +     N  + +S   QV  P HP+  AA RLR QAGRS    A+WA WELARL+V  RLKTHVGGP ATFA LERA+ K ++EL    +    K G   RR  LL+TFLGA ERHI +   GS G DV   YL   RK +           DG+  +  E+ G  A                     G Q +Y  S+R+ LPPPSKKTEAFF AN RVC DWLARVRP+L  V+L+L+G QE+G ++  +RL DLAS AK     SS      PS+ L       Q++EE AV VA+A+ +   KESGVE LQGLERWLAA Q+  +                      SL WLQGLQLM QGRYE+AL RW+G VFFHEGF++LL   +S+  S    S       S ++  +++++A   A  LLQ A+T AVL+ +MD+SV+CYC LGDWRGLG FL+A                                                                            L + R+ ++  E+   IP W+L+ L+PRV+   IQTWMR+DG+  SL  A +Q      G  E  + GE    +A I    TP +P STRRP+LS++ W+++ S LQQH  SS      P PP
Sbjct:    2 SSSLTLWREKLAFESPSLPLPLTPVAPSVS---------QTLWARTLGELALRGSGEDEEPCGQG----DSGVFDLYAWLASEVEGGRCHGQPKGHGEEVLLLNLSALSAAVAVA-CPRRIE------ERVEGKGEGGRPLAKAQAR--AEAAGCRALQALGFLPSGPDPPVHDQASRSLPAPSPALQAAAMDLASRLLRTLPSSRTVDLLPHLLEQAVPAALAPLRSPSSPAAGTSPA-TRVLRAIDLALGDLL------------------------------------------KAASCTGSGPFSGTCLSRAVATRLLQGALGMLARSSPFADFTPLVDEELEGSDEVGVALGKHRGLALSLIGKILRLLPPPARTLAHSPXXXXXXXXXXYEAQSTLLLLQEARTLLVHALRDPIPAIRPRALQTLALFRLLVDDHCLQYAPSC-GSEAVGDVLLLQVEPVASACSPFQRTPEFVRRLFDYLIGV---------GGEHPEADSEVAQGREQGKAQRARQTRSASSEALSRAQKRGGGDTGVAXXXXXXXXXXXXXXXXXADDEPFFQWLRSLCLDAMTGVLRIPSFADTAAGEA--------------SHSLAVSLLETCLGQADDGVLKSSWRGDNVAIWGNFPSPSSLSKQVQRPEHPMNRAARRLRAQAGRSLRSPALWAVWELARLLVWGRLKTHVGGPGATFATLERAMAKIQIELMQDKK----KDGALLRRADLLVTFLGAFERHIANVVEGSEGRDVGSQYL--ARKMQGHVTNIEIDRGDGEGSQASERYGNCARDVPCQVQEAKPVGGAERTQPGGQCEYPSSVRIALPPPSKKTEAFFLANKRVCWDWLARVRPMLVRVSLSLEGCQEQGVEYAFKRLVDLASVAKQRGPKSSSITVPSPSVPLSVSPVSFQDVEELAVEVAVAVTEHF-KESGVEMLQGLERWLAALQRSNSCPSLSASSTALAL-------PTSLVWLQGLQLMAQGRYEDALRRWIGGVFFHEGFNTLLTAFTSSSLSQSQVSQAKDMKRSIVVTASVKAQASLTAWLLLQQAQTPAVLQTIMDRSVLCYCRLGDWRGLGVFLQAVQALHVVLSAMVGEEIEAEGVLSAMQGCGCNADRMKGGGSDDREGKKWKRVIEKRGRLQEGEE-----------AFLEDDREERDAVEKAGKIPSWVLSALVPRVESAWIQTWMRVDGQGCSLLFAQAQWGEKGLGAYETVNLGESSTRKATICKDGTPSLPTSTRRPNLSAQGWMEVFSFLQQHRQSSSGFSRYPSPP 1190          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: EWM21718.1 (hypothetical protein Naga_100841g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 126.3 bits (316), Expect = 9.000e-25
Identity = 78/172 (45.35%), Postives = 107/172 (62.21%), Query Frame = 0
Query:  131 WGSQLRAALRQAERAMVALRVQRYLEQARDLVEQRAQRGEVEHDREKAEKAAEGASGLVETCLHILLEETDNALAAPGLVGTVLGLLRQIGDSAYACLPDALEARFTEVVEALLGWTLDPSWVEDAGGREAIEEALLAWGVGSRPGRQSLWGRNLPLAKTLLGVMLGDMQGL 303
            W  QLR  L QAE  + +  V   L++A +++E RAQR + E D  K   AAEGA  LV+TC+ ++    +       LV  V+ +LR++GDSA+  L  AL+ARF EVV+ALL W  + +  E  G   A+EEAL AWGVGS  G  SLWGR+LPLA++LL  +L ++Q L
Sbjct:  119 WPLQLRGVLEQAESELDSRAVGICLDRALEMIESRAQRAKTERDARKTGAAAEGARALVDTCVRLVRPAGEATSLGVDLVCVVVPVLRRLGDSAHPGLSAALDARFAEVVKALLVWAREAAG-EAVGACMAVEEALQAWGVGS--GDLSLWGRHLPLARSLLQDILEEVQDL 287          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: XP_012573213.1 (PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase SMG1-like [Cicer arietinum])

HSP 1 Score: 75.9 bits (185), Expect = 1.400e-9
Identity = 84/338 (24.85%), Postives = 133/338 (39.35%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSLKLLQ-----EIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +++RL+T++GGP  TFAALER       L++   E + G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LP  ++++  FFRAN +VC DW +R+   + +  L L    +   Q+   RL DL     SA K +  A    +L  ++     +I +    ++LA+ K SE +S    L GL++W++A     TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  838 AWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQNDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPSSTRQSSVFFRANKKVCEDWFSRICEPMMNAGLALH-CNDAVIQYCTLRLQDLNNLSVSALKEKPRAQVTDNLNNIRGRNKGDILKVIRHISLALCKSSEPDS----LIGLQKWVSA-----TFSSLLGEENQSFNECGTVGP---LSWITGLVYQARGEYENAAAHFTHLLQTEESLSSL 1096          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: GAU19167.1 (hypothetical protein TSUD_89320 [Trifolium subterraneum])

HSP 1 Score: 74.7 bits (182), Expect = 3.100e-9
Identity = 83/338 (24.56%), Postives = 131/338 (38.76%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSL-----KLLQEIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +S+RL+T++GGP  TFAALER       L++   E + G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LP  S+++  FFRAN +VC DW +R+   + +  L L    +   Q+   RL DL     SA K    A +  ++     +   ++      ++LA+ K +E +S    L GL++W++A     TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  838 AWWAVQEAARYCISTRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQNDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPSASRQSSVFFRANKKVCEDWFSRICEPMMNAGLALH-CNDAVIQYCTLRLQDLKNLSVSALKENPRAQATDNIHNSRGRNKGDVLRVLRHISLALCKSAEPDS----LIGLQKWVSA-----TFSSILGDENQSFNECETVGP---LSWISGLVYQARGEYENAAAHFTHLLQSEESLSSL 1096          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: XP_003606863.2 (serine/threonine-protein kinase SMG1 [Medicago truncatula] >AES89060.2 phosphatidylinositol 3- and 4-kinase [Medicago truncatula])

HSP 1 Score: 74.3 bits (181), Expect = 4.100e-9
Identity = 83/338 (24.56%), Postives = 132/338 (39.05%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSLKLLQ-----EIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +S+RL+T++GGP  TFAALER       L++   E   G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LP  ++++  FFRAN +VC DW +R+   + +  L L    +   Q+   RL DL     SA K +  A    +L  ++     ++ +    ++LA+ K +E +S    L GL++W++A     TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  837 AWWAVQEAARYCISTRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQIDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPSATRQSSVFFRANKKVCEDWFSRICEPMMNAGLALH-CNDAVIQYCTLRLQDLKNLSVSALKEKPRAQVTDNLHNIRGRNKGDVLKVLRHISLALCKSAEPDS----LIGLQKWVSA-----TFSSLLGDENQSFNEFGTVGP---LSWISGLVYQARGEYENAAAHFTHLLQTEESLSSL 1095          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: KYP66016.1 (Serine/threonine-protein kinase SMG1, partial [Cajanus cajan])

HSP 1 Score: 73.9 bits (180), Expect = 5.300e-9
Identity = 81/338 (23.96%), Postives = 134/338 (39.64%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSLKLLQ-----EIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +++RL+T++GGP  TFAALER       L++   E S G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LPP ++++  FFRAN +VC DW +R+   + +  L +    +   Q+   RL +L     SA K +  A +  +L  ++     ++ +    ++LA+ K S+ +S    L GL++W++      TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  639 AWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQSDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPPATRQSTLFFRANKKVCEDWFSRICEPMMNAGLAVH-CNDAVIQYCTLRLQELKNLSVSALKEKSRAQATDNLHNIRGRYKGDVLKVLRHISLALCKSSDPDS----LIGLQKWVSI-----TFSSLLGEENESFSECGTVGP---LSWISGLIYQARGEYENAAAHFTHLLQTEESLSSL 897          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: XP_020216266.1 (uncharacterized protein LOC109800002 [Cajanus cajan])

HSP 1 Score: 73.9 bits (180), Expect = 5.300e-9
Identity = 81/338 (23.96%), Postives = 134/338 (39.64%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSLKLLQ-----EIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +++RL+T++GGP  TFAALER       L++   E S G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LPP ++++  FFRAN +VC DW +R+   + +  L +    +   Q+   RL +L     SA K +  A +  +L  ++     ++ +    ++LA+ K S+ +S    L GL++W++      TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  835 AWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQSDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPPATRQSTLFFRANKKVCEDWFSRICEPMMNAGLAVH-CNDAVIQYCTLRLQELKNLSVSALKEKSRAQATDNLHNIRGRYKGDVLKVLRHISLALCKSSDPDS----LIGLQKWVSI-----TFSSLLGEENESFSECGTVGP---LSWISGLIYQARGEYENAAAHFTHLLQTEESLSSL 1093          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: KHN06167.1 (Serine/threonine-protein kinase SMG1 [Glycine soja])

HSP 1 Score: 73.2 bits (178), Expect = 9.100e-9
Identity = 82/338 (24.26%), Postives = 132/338 (39.05%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSLKLLQ-----EIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +++RL+T++GGP  TFAALER       L++   E S G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LPP S+++  FFRAN +VC DW +R+   + +  L +    +   Q+   RL +L     SA K +  A    +L  ++     ++ +    ++LA+ K S+ +S    L GL +W++      TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  779 AWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQSDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPPASRQSTLFFRANKKVCEDWFSRICEPMMNAGLAVH-CNDAVIQYCTLRLQELKNLSVSALKEKSRAQVTDNLHNIKGRYRGDVLKVLRHISLALCKSSDPDS----LIGLRKWVSI-----TFSSLLGEENQSSSEGGTAGP---LSWISGLIYQARGEYENAAAHFTHLLQTEESLSSL 1037          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: XP_014619488.1 (PREDICTED: serine/threonine-protein kinase SMG1 [Glycine max] >KRH29549.1 hypothetical protein GLYMA_11G123500 [Glycine max] >KRH29550.1 hypothetical protein GLYMA_11G123500 [Glycine max])

HSP 1 Score: 73.2 bits (178), Expect = 9.100e-9
Identity = 82/338 (24.26%), Postives = 132/338 (39.05%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSLKLLQ-----EIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +++RL+T++GGP  TFAALER       L++   E S G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LPP S+++  FFRAN +VC DW +R+   + +  L +    +   Q+   RL +L     SA K +  A    +L  ++     ++ +    ++LA+ K S+ +S    L GL +W++      TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  837 AWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQSDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPPASRQSTLFFRANKKVCEDWFSRICEPMMNAGLAVH-CNDAVIQYCTLRLQELKNLSVSALKEKSRAQVTDNLHNIKGRYRGDVLKVLRHISLALCKSSDPDS----LIGLRKWVSI-----TFSSLLGEENQSSSEGGTAGP---LSWISGLIYQARGEYENAAAHFTHLLQTEESLSSL 1095          
BLAST of NO25G02110 vs. NCBI_GenBank
Match: KRH29551.1 (hypothetical protein GLYMA_11G123500 [Glycine max])

HSP 1 Score: 73.2 bits (178), Expect = 9.100e-9
Identity = 82/338 (24.26%), Postives = 132/338 (39.05%), Query Frame = 0
Query: 1152 AVWAAWELARLVVSSRLKTHVGGPAATFAALERA------LVKAKLELSGGGRRWEGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKEREEKERTRDGKEWKGDEKGGEGAXXXXXXXXXXXXXXXXGDQRDYLPSIRVVLPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLERLTDL----ASAAKAEVAASSIPSLKLLQ-----EIEETAVGVALAMAKQSEKESGVERLQGLERWLAAFQQQPTFXXXXXXXXXXXXXXXXXXPSASLAWLQGLQLMVQGRYEEALHRWVGSVFFHEGFSSL 1475
            A WA  E AR  +++RL+T++GGP  TFAALER       L++   E S G     G +G     + LL+ F+ AL++++ +A  GS                                                                  V+LPP S+++  FFRAN +VC DW +R+   + +  L +    +   Q+   RL +L     SA K +  A    +L  ++     ++ +    ++LA+ K S+ +S    L GL +W++      TF                  P   L+W+ GL    +G YE A   +   +   E  SSL
Sbjct:  837 AWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQSDGNLSMIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGS------------------------------------------------------------------VILPPASRQSTLFFRANKKVCEDWFSRICEPMMNAGLAVH-CNDAVIQYCTLRLQELKNLSVSALKEKSRAQVTDNLHNIKGRYRGDVLKVLRHISLALCKSSDPDS----LIGLRKWVSI-----TFSSLLGEENQSSSEGGTAGP---LSWISGLIYQARGEYENAAAHFTHLLQTEESLSSL 1095          
The following BLAST results are available for this feature:
BLAST of NO25G02110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21711.11.300e-14535.30serine threonine-protein kinase smg1-like protein ... [more]
EWM21718.19.000e-2545.35hypothetical protein Naga_100841g1, partial [Nanno... [more]
XP_012573213.11.400e-924.85PREDICTED: LOW QUALITY PROTEIN: serine/threonine-p... [more]
GAU19167.13.100e-924.56hypothetical protein TSUD_89320 [Trifolium subterr... [more]
XP_003606863.24.100e-924.56serine/threonine-protein kinase SMG1 [Medicago tru... [more]
KYP66016.15.300e-923.96Serine/threonine-protein kinase SMG1, partial [Caj... [more]
XP_020216266.15.300e-923.96uncharacterized protein LOC109800002 [Cajanus caja... [more]
KHN06167.19.100e-924.26Serine/threonine-protein kinase SMG1 [Glycine soja... [more]
XP_014619488.19.100e-924.26PREDICTED: serine/threonine-protein kinase SMG1 [G... [more]
KRH29551.19.100e-924.26hypothetical protein GLYMA_11G123500 [Glycine max][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL047nonsL047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR045ncniR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR073ngnoR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO25G02110.1NO25G02110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568835gene_8839Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100841g1gene8710Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO25G02110.1NO25G02110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO25G02110 ID=NO25G02110|Name=NO25G02110|organism=Nannochloropsis oceanica|type=gene|length=5345bp
ATGTCTGAGTCCTCGCCCCCGCGCCGACCCCGTGCGGACGGTGCTGCGCC
TTCATCTTCTATTAGCAGACAGCAGCTACTTTACGACCCTTCATCGGGGG
GGCTCGTTGCGCCTGTCTCGGCTACCCACCATCTCTCCTCGCTTGACAGC
CGTACGAGCATTCGTCGCCGGGAACGATGGGCAGAAGGATCAACAGGAGC
CTTACGGCGACCAACCTCCCTCTCCTCCTCTTCACCTTTCCTCCCAGTGC
GACGCTCGTCCTCATCCTTGTCCTCATCACGACAGCAGCAGCAACAACAA
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAATTCA
GGAGCAGCAGCAGCTTCGGGGAGGACGGCGGACATCGGGGTGGGGCTCGC
AGTTAAGGGCAGCCTTACGACAGGCGGAGCGGGCAATGGTGGCGCTACGC
GTGCAGCGATATCTTGAGCAAGCACGCGATTTGGTCGAACAGCGCGCGCA
ACGAGGTGAGGTAGAACACGACAGGGAAAAGGCTGAAAAGGCTGCCGAGG
GGGCATCGGGTTTGGTGGAGACATGCCTGCACATCCTCTTGGAGGAAACC
GACAATGCTTTGGCGGCGCCAGGCCTTGTTGGGACAGTGCTGGGCTTGCT
CCGGCAAATAGGGGACTCAGCTTATGCCTGCTTGCCTGATGCGTTGGAAG
CTCGCTTCACGGAGGTGGTTGAGGCTCTATTGGGATGGACATTAGATCCT
TCTTGGGTAGAGGATGCAGGAGGTCGGGAGGCGATCGAGGAGGCACTGCT
GGCTTGGGGTGTGGGGAGTAGGCCTGGGCGTCAATCACTCTGGGGACGAA
ACCTTCCTTTGGCGAAGACTCTGCTTGGGGTCATGCTGGGGGATATGCAG
GGCTTGGTGGTCAAGTGGGAGGGAGAGGCGGAGGCGAGAGGGGGGAGAAG
CAAGGAGGAGCCACCGCGGCTTCGGAGTCTGGCTGGTCTTTTTGCCGTCC
TCCTCAGCTGTTTGCCTCCTGAGCTGGCTTTCGGGGAGAGGGGAGGGGAC
GAGTGGGAGCAAGAAGTAGACCCCTGCTCgtctgttttgccttcgttggc
gtcgcctttcgcgagcttggtgatcgactacctccgctttctctgcatcc
tgctcccttccaaaacgttgcgtttgccctcctccccccccccccccctt
cctcctcctcttcgtcctcttcttccagTGGCTATGACAATAAGACTGGT
TTACTCGTTTTCTTGATGCGGTGCCTGCTCAAGGTGGCCGAAACACTTTC
TCCCGTCGCCTTTGCCGCCTTCTCCACCCCCTTCTCCTCCCGTTTAACGG
CCCCGTTTATTCTTGAAGCTTATTGTCTGGGAGCTCATTTTTGCTTGGGC
GGCCATGACGTTGAGGCCTCTGCTGACACCTGGCCCCGTGCGTGGATTGA
ACAAGGGCTCACAGCACATCTGCACCTACTCACACGCCTCATTCCCCCTC
CGTCTCCTTCCCTGCTGGCATTGGACAAGACCACGTTGCGGACCGTGCTA
GGAATGAGGCCCTCGTCCCTGTCTCCTTCTTCCTACTCCACCTTTTTCAT
TCCCAGCTCTTGCTTGCACGTGTGGAAGCGATGTCTGGCGGCCGATGCCT
CCTCTCCCGCCTCCTCTTTTCCTCCCTCATCCTCCTCCTCCGTCTCCTCC
ATGACGAATGTGCGTACGCTATGGGCCCGGAACTTCGCCGAGCTTGCCTT
GCGGAGTGTAGACGAGGAGGAGGAGTCCAAGGAGAGAGGAGGAAATTGCC
GGGAGGAGGAGGATGTCGACCCTTTTACATGGCTCGCGGAAGAAGTCGAA
AAGGAAATGGAGGTAGGCAGGGAAGAGGGGGTGGTGATAGTTGATCTGTG
GGCTCTGAGTGCTGCGATGGCGGTGGTGTTTGCTCCACGCAAAGACAAGG
ACGTGATAAAAAATGCAGAGAAGGAAGAAGAGGGTGGGAAGCGGGGACAA
TGGCTGGCCAGGGCCAGGGCACAATTACTGGCTAGGGAGGCGAGCTGTCG
GGCATTGCGGTGCTTAAATTTCATGTCCCCGTCCTCATCCTCCTCATCTA
CATCCTTTTGCTCTGCCATGGTTCCCTTCTCCTCGGCCTTGCAAGGTGCT
TTCATAGAGCTAGCAATGCGCCTGCTGCGGACATGTCCCCGCTCCCAAAA
AGGAGACTTTCTGCCCCAGCTGCTGGAGATGGTCCTGCCTTTACCACTTG
CCTTTGTCCGCGGTACCTCACCAGTATCCTCTCTCCCTTCTCCATCCTTG
CCACCGGCGTTGTCGATGGTCGATGAGGTGTTAGGCCAGGTCTTGACCAC
TACATCGGCGTTCTGCTCCTATTCTTCTTCCTCCTCCTCCTCCTCCTTCT
CCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCA
CTGATCCTGTGCATTTCTCCCTCCACCTGGACCTGCTTGCTGCAAATTAC
AGTTAAATTCCTCTCTTCCTCTTCCTTCCCCCCCAGCTCTTCCTCCTCCT
GCTTCCCTTCTTCCTGTCCCTCCTCTTCTTCTGTTTTAGAAGGCGGACAG
CGGCAGCAGAGGGAGGAGGAAGTAAATGAGGAAATGGCTTCAGCCCTGGG
TAACCATCGAGCCCTCGGCCTGGCCTTGCTGGGAAAGCTCCTTCGTCTCT
CTCCTCTACCCTTCTACTCCTCCCAGTCCTCCGCCATCCCTCTTTCAATA
AAGGAAGAGAGCAAGAGACTGGATGCTACTACAGGCTTATTAATAAAAGC
GTACAATTTTGTTGTCCTTGCTCTTCGCGATCCCCTCCCCGGCCTCCGTC
CCCAGGCACTCCAAACCCTCGCCCTCTTCCACCTCCTCGCCAGCAGCCTC
CCTCCCTCGCTTCCTCCGTCCACATTCCAGGGCTTACCTCTGGGGGACGT
AATGTTGCTACAAACAGAGCCTTTAGCTCTCCTCTCTAGTCCATTTTACC
GCAATCCTGAGCATGTCCGCCGCCTGTTTGATTACCTGGTGGGTACTGCA
ACTGCTACTGTTGCTGCTTCTGCTGGAGCTGCAGGTGTGGGACGAGCAAG
GGTGGGAGGAGGAGAGCAACAGCAGCAGCGATTGCAAAGTAAAAGGATTG
GTACAGATCCCACTCCTGTCTTTCTTAATCGTTGCAACATCGGTGGAGGG
TGTGTTGGAGCATCTGTAGCCGCAGCTGAAGGAGGAAGAGAATCGAATGT
GGCGGTGGACGACGAGCCCTACTTTCAGTGGCTGCAGACTCTATGTCTTG
AAGCTACGATGGGAGTGCTGCGAAATCACATGTCGACGACTGTTGCCGGT
GGTGGTGCTGATGGTGGTGCTGGTACTGGTGCAGTGGCTTTCCCCCCTCC
TTCGGCCTCCCCCGCTGTGGCCTTGCTGCAGTCGTGCCTGGGCGAAATGC
AGGAGCAGATTGACATCCTTCCAGAGGAGGGTAAGCATTGCAATAACAAC
AGCAACAACGCCAGCAACAGGACACAAGTTTCTTCCCCACACCCCGTCCT
TCTCGCCGCCCACCGTCTTCGAGAGCAAGCAGGCCGGTCACAGTCCGTGT
CTGCCGTGTGGGCCGCCTGGGAACTAGCTCGATTGGTGGTTTCGTCTCGA
CTCAAGACTCACGTAGGAGGGCCAGCTGCCACCTTTGCTGCCCTCGAACG
TGCGCTCGTCAAGGCCAAGCTAGAGCTGTCAGGAGGAGGAAGAAGATGGG
AAGGAAAAGCGGGAGGCACATTCAGGAGGGTTGGGTTGTTGATGACATTT
TTGGGGGCTTTAGAGAGACATATAGGGAGTGCTGCGCACGGTTCGGGGGG
GACGGACGTGGCTGGCTTGTACCTGGAGGCATGTCGGAAGGAGAGGGAGG
AGAAGGAGAGGACAAGAGATGGAAAAGAATGGAAAGGAGACGAGAAGGGA
GGAGAAGGAGCTGCAGCAGTGGACGACGACAAAGCAGAGGCTGAGGCAGA
GGCGGAGGAGGGGGATCAACGAGATTACCTTCCATCGATTCGTGTTGTTT
TGCCCCCTCCGTCTAAGAAAACTGAAGCGTTTTTTCGAGCGAATCATCGT
GTCTGTCTTGACTGGCTTGCTCGTGTCCGGCCGCTGCTTACAGATGTGGC
GCTGACCCTCGACGGTTATCAAGAAGAAGGTGCTCAGCACGGCTTAGAGC
GTCTCACGGACCTCGCCTCAGCCGCAAAAGCAGAAGTAGCAGCCTCTTCC
ATTCCCTCTCTCAAGTTATTACAGGAAATAGAAGAGACAGCCGTGGGTGT
AGCCCTGGCCATGGCCAAGCAGTCGGAGAAGGAGAGTGGAGTGGAGCGAC
TGCAAGGACTAGAAAGATGGCTTGCTGCATTCCAACAGCAGCCCACCTTC
CCGCCCTCTTCGTGCTCTTCGTCCTCTCCCTCCTCTGATCCTCCTTTGCT
CCTCCCTTCCGCCTCCCTCGCTTGGCTCCAAGGTCTTCAGCTGATGGTCC
AGGGCCGCTATGAGGAGGCCTTGCATCGGTGGGTGGGGAGCGTCTTCTTC
CACGAGGGGTTCAGCTCCCTCCTTCGCCTCACGTCTTCCACCCGCTCGTC
CCTCCCTCCCTTTTCCTCCTCGATCCTCGATCCTGCCATTCAATCCCGCG
CACGGGCGGCGGCTGTGCGACTGTTGCAGCTGGCGAGAACGACGGCGGTG
TTACGTATGGTAATGGACAAAAGTGTGATGTGCTATTGTTTCCTGGGCGA
TTGGCGCGGGCTGGGATACTTCCTGAGGGCTGTACGGGCTCTGCACGCGG
CTTTGTCGGCCTTGAAAGCGGAAAGGGAGGGAGAAGAGGTGGAAGAGGAG
GAGGAGGAGAAGGGGAATGGGATGAGGAGTAAGGGGAGGAAGGTAAGGAA
GGAAAAGAGGGACAAGGAGAAGAAGGGTAGTGGCGAGCAGCATCATGAAA
AAAATGATGATCATGATGGGGGTGAAGAAGAGGAAGGGGGGCAAAATGCA
TTTGGCGCTTTGCGCGAAATTCGAAAGAGAAAAGAGGACGAAGAGGTGCT
GCATATTCCAGATTGGCTATTGGCGGGATTACTGCCTCGTGTGGATCCCA
CCCTCATACAGACATGGATGCGCATCGATGGCCGGGCTTGGTCTCTCACG
GCTGCCGCGTCGCAGCATGAAGGAGGAGTAGAAGAAGCATCGGCAGGAGA
AGGAGAAGCAGCAGAGGCAATTATCACACCCGTGCCGAAATCTACACGTC
GGCCGGACTTGTCGTCCAAGGAGTGGCTGGACATGCTCTCCCTCCTACAG
CAGCATGCCACTTCTTCCCCCCCCCTTCCTCCTCCTCACCAATGA
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protein sequence of NO25G02110.1

>NO25G02110.1-protein ID=NO25G02110.1-protein|Name=NO25G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1732bp
MSESSPPRRPRADGAAPSSSISRQQLLYDPSSGGLVAPVSATHHLSSLDS
RTSIRRRERWAEGSTGALRRPTSLSSSSPFLPVRRSSSSLSSSRQQQQQQ
QQQQQQQQQQQQQQQIQEQQQLRGGRRTSGWGSQLRAALRQAERAMVALR
VQRYLEQARDLVEQRAQRGEVEHDREKAEKAAEGASGLVETCLHILLEET
DNALAAPGLVGTVLGLLRQIGDSAYACLPDALEARFTEVVEALLGWTLDP
SWVEDAGGREAIEEALLAWGVGSRPGRQSLWGRNLPLAKTLLGVMLGDMQ
GLVVKWEGEAEARGGRSKEEPPRLRSLAGLFAVLLSCLPPELAFGERGGD
EWEQEVDPCSGYDNKTGLLVFLMRCLLKVAETLSPVAFAAFSTPFSSRLT
APFILEAYCLGAHFCLGGHDVEASADTWPRAWIEQGLTAHLHLLTRLIPP
PSPSLLALDKTTLRTVLGMRPSSLSPSSYSTFFIPSSCLHVWKRCLAADA
SSPASSFPPSSSSSVSSMTNVRTLWARNFAELALRSVDEEEESKERGGNC
REEEDVDPFTWLAEEVEKEMEVGREEGVVIVDLWALSAAMAVVFAPRKDK
DVIKNAEKEEEGGKRGQWLARARAQLLAREASCRALRCLNFMSPSSSSSS
TSFCSAMVPFSSALQGAFIELAMRLLRTCPRSQKGDFLPQLLEMVLPLPL
AFVRGTSPVSSLPSPSLPPALSMVDEVLGQVLTTTSAFCSYSSSSSSSSF
SSSSFSSSSSSSSSSSALILCISPSTWTCLLQITVKFLSSSSFPPSSSSS
CFPSSCPSSSSVLEGGQRQQREEEVNEEMASALGNHRALGLALLGKLLRL
SPLPFYSSQSSAIPLSIKEESKRLDATTGLLIKAYNFVVLALRDPLPGLR
PQALQTLALFHLLASSLPPSLPPSTFQGLPLGDVMLLQTEPLALLSSPFY
RNPEHVRRLFDYLVGTATATVAASAGAAGVGRARVGGGEQQQQRLQSKRI
GTDPTPVFLNRCNIGGGCVGASVAAAEGGRESNVAVDDEPYFQWLQTLCL
EATMGVLRNHMSTTVAGGGADGGAGTGAVAFPPPSASPAVALLQSCLGEM
QEQIDILPEEGKHCNNNSNNASNRTQVSSPHPVLLAAHRLREQAGRSQSV
SAVWAAWELARLVVSSRLKTHVGGPAATFAALERALVKAKLELSGGGRRW
EGKAGGTFRRVGLLMTFLGALERHIGSAAHGSGGTDVAGLYLEACRKERE
EKERTRDGKEWKGDEKGGEGAAAVDDDKAEAEAEAEEGDQRDYLPSIRVV
LPPPSKKTEAFFRANHRVCLDWLARVRPLLTDVALTLDGYQEEGAQHGLE
RLTDLASAAKAEVAASSIPSLKLLQEIEETAVGVALAMAKQSEKESGVER
LQGLERWLAAFQQQPTFPPSSCSSSSPSSDPPLLLPSASLAWLQGLQLMV
QGRYEEALHRWVGSVFFHEGFSSLLRLTSSTRSSLPPFSSSILDPAIQSR
ARAAAVRLLQLARTTAVLRMVMDKSVMCYCFLGDWRGLGYFLRAVRALHA
ALSALKAEREGEEVEEEEEEKGNGMRSKGRKVRKEKRDKEKKGSGEQHHE
KNDDHDGGEEEEGGQNAFGALREIRKRKEDEEVLHIPDWLLAGLLPRVDP
TLIQTWMRIDGRAWSLTAAASQHEGGVEEASAGEGEAAEAIITPVPKSTR
RPDLSSKEWLDMLSLLQQHATSSPPLPPPHQ*
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Synonyms
Publications