NO25G01420, NO25G01420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO25G01420 vs. NCBI_GenBank
Match: EWM20973.1 (FAS1 domain protein [Nannochloropsis gaditana]) HSP 1 Score: 360.5 bits (924), Expect = 4.000e-96 Identity = 184/221 (83.26%), Postives = 198/221 (89.59%), Query Frame = 0 Query: 24 LLLPTTHQPQTSHLVRMKFLAATLVAIAAPAMAFMPAARVPATPVTAVSAAIKAGGDYYPGQVDYGNSKIDVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDKAGGVDELLKDKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTPQAGGTIPVK 245 LL P H P MKFLA TLVA+AAPA+AFMP ARVPATP TA+SA IKAGGDYYPGQVDYG+S IDV++T+K GKFNQLAKAL TGLDKALA+ENGIFCLYAPTDEAF+KAGGVD+LL+DKA L EVLKYHVVKLFVKDKEHIRSFRLSNK TLQGGKVRVQVKANPDGESFVIFNNGEA+CVDGLSDIDAVNGH+HGISGILTPQAGG+IPVK Sbjct: 37 LLSPKQHIPLP---YTMKFLATTLVALAAPALAFMPMARVPATPATALSAVIKAGGDYYPGQVDYGSSSIDVYETLKQTGKFNQLAKALEATGLDKALAQENGIFCLYAPTDEAFEKAGGVDKLLEDKAGLEEVLKYHVVKLFVKDKEHIRSFRLSNKATLQGGKVRVQVKANPDGESFVIFNNGEAQCVDGLSDIDAVNGHIHGISGILTPQAGGSIPVK 254
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_011142147.1 (fasciclin domain-containing protein [Gloeobacter violaceus] >NP_925096.1 hypothetical protein glr2150 [Gloeobacter violaceus PCC 7421] >BAC90091.1 glr2150 [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 85.5 bits (210), Expect = 2.500e-13 Identity = 59/153 (38.56%), Postives = 79/153 (51.63%), Query Frame = 0 Query: 94 DVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLKDKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGL---SDIDAVNGHVHGISGILTPQAGGTI 242 D+ DT G F L AL TGLDK L K G F ++APTDEAF K G +D LLKDKA LT++L YHV V K + + + T++G V+VQ++ G+ E + +DI A NG +H I +L P GG + Sbjct: 28 DIVDTAVKAGDFKTLVTALQATGLDKTL-KTKGPFTVFAPTDEAFKKLPPGTLDALLKDKAKLTKILTYHV----VSGKVLSSALKPGSVKTVEGAPVKVQIE------------GGKVEVNEAYVTKADITADNGVIHVIDSVLLPPEGGAM 163
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_023172842.1 (fasciclin domain-containing protein [Gloeobacter kilaueensis] >AGY57736.1 beta-Ig-H3/fasciclin [Gloeobacter kilaueensis JS1]) HSP 1 Score: 82.8 bits (203), Expect = 1.600e-12 Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 0 Query: 94 DVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLKDKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKAN--PDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTPQAGGTI 242 D+ DT G F LAKAL ETGLDK L K G F ++APTDEAF K G ++ LLKDKA L+++L YHV V K + T++G V V+++ + ES+V +DI A NG +H I +L P G + Sbjct: 28 DIVDTAVKAGDFKTLAKALKETGLDKTL-KGKGPFTVFAPTDEAFSKLPPGTLEALLKDKAKLSKILTYHV----VAGKVLSTDLKSGEVKTVEGSPVEVKLEGSKVEVNESYVT-----------KADIVADNGVIHVIDKVLLPPTGSAM 163
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_098461542.1 (fasciclin domain-containing protein [Propionicimonas paludicola] >PFG18171.1 putative surface protein with fasciclin (FAS1) repeats [Propionicimonas paludicola]) HSP 1 Score: 82.4 bits (202), Expect = 2.100e-12 Identity = 62/144 (43.06%), Postives = 79/144 (54.86%), Query Frame = 0 Query: 97 DTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLKDKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGL-SDIDAVNGHVHGISGILTPQA 238 DT G F LA AL GL + L K G F ++APTDEAF K AG +D LLKDK ALT VL YHVV V + + T+QGG V+VK DG+ V +G V+ + +DI A NG +H I G+L P++ Sbjct: 60 DTAVAAGDFKTLATALTAAGLVETL-KGPGPFTVFAPTDEAFAKLPAGTLDGLLKDKKALTSVLTYHVVSGEVMASQ-VAGMNGEKVKTVQGGTFTVKVK---DGK--VSLTDGAGNTVNVIKTDITASNGVIHVIDGVLLPKS 196
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_072266596.1 (fasciclin domain-containing protein [Armatimonadetes bacterium DC] >CUU35305.1 Uncaracterized surface protein containing fasciclin (FAS1) repeats [Armatimonadetes bacterium DC]) HSP 1 Score: 82.0 bits (201), Expect = 2.800e-12 Identity = 60/154 (38.96%), Postives = 83/154 (53.90%), Query Frame = 0 Query: 84 GQVDYGNSKIDVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLKDKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTP 236 G V K D+ DT G+F L K + E GL AL E G F ++APTDEAF K VD LLKDK AL +VL YHVV V K+ + +L + TLQG + ++V+ N ++ N +A+ V +DI+ NG +H I ++ P Sbjct: 19 GVVAAPREKKDIVDTAVAAGQFKTLVKLVQEAGLVDALRGE-GPFTVFAPTDEAFAKLPKAQVDALLKDKEALKQVLLYHVVSGKVMSKDVV---KLKSAKTLQGKSINIRVRNN------TVYIN-DAKVVK--ADIECTNGVIHVIDKVILP 159
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_104906212.1 (fasciclin domain-containing protein [Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont'] >AVH70630.1 fasciclin domain-containing protein [Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont']) HSP 1 Score: 79.0 bits (193), Expect = 2.300e-11 Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 0 Query: 94 DVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLKDKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRV----QVKANPDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTP 236 D+ DT G FN L A+ GLD AL K +G F ++APTDEAF K +G V+ELL+D L EVL+YHVV + E +S +L+ T QG + V VK N +++++ D++A NG +H I +L P Sbjct: 3 DIIDTAINAGSFNTLVTAITTAGLDTAL-KGDGPFTVFAPTDEAFSKLPSGAVEELLEDVIKLREVLEYHVVSGKINASELNQSQKLT---TTQGKDINVSNGNNVKVN---DAYIV-----------TLDVEADNGVIHVIDNVLFP 132
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_104830028.1 (fasciclin domain-containing protein [Marinicaulis flavus] >PQA88791.1 hypothetical protein CW354_06895 [Marinicaulis flavus]) HSP 1 Score: 79.0 bits (193), Expect = 2.300e-11 Identity = 63/176 (35.80%), Postives = 92/176 (52.27%), Query Frame = 0 Query: 65 ATPVTAVSAAIKAGGDYYPGQVD-YGNSKIDVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLK--DKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTP 236 A P+ A +AA+ AG + D +G +K D+ DT G+F LA AL E GL + L K G F ++APTD AF+K G V+ LLK +K LT +L YHVV VK + + +L + T+ G + + VK + V+ N+ +D+ A NG +H I +L P Sbjct: 4 AKPLIAAAAALAAG--FGAANADHHGKAKKDIVDTAVEAGQFTTLATALTEAGLVQTL-KGEGPFTVFAPTDAAFEKLPEGTVESLLKPENKDQLTAILTYHVVPGKVKAADVV---KLDSADTVNGASLSIAVK-----DGAVMINDATVTA----ADVKASNGVIHVIDSVLLP 164
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_077412218.1 (fasciclin domain-containing protein [Marinicella sp. F2]) HSP 1 Score: 78.6 bits (192), Expect = 3.100e-11 Identity = 62/165 (37.58%), Postives = 86/165 (52.12%), Query Frame = 0 Query: 77 AGGDYYPGQVDYGNSKIDVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLK--DKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTPQA 238 AGG Y + D+ DT + G FN L A+ GL L K +G F ++APTDEAF K AG V+ LLK +K L +L YHVV VK K+ + +L++ T+QGG V + +K DG + NG + V +DI NG +H I ++ P A Sbjct: 22 AGGSY--------KKQKDIVDTAVSAGSFNTLVAAVKAAGLVDTL-KGDGPFTVFAPTDEAFAKLPAGTVENLLKPENKDQLAAILTYHVVSGKVKAKDVV---KLNSATTVQGGDVNIMIK---DGG---VVLNGNSNVVK--TDIGTSNGVIHVIDTVILPPA 166
BLAST of NO25G01420 vs. NCBI_GenBank
Match: WP_092405374.1 (fasciclin domain-containing protein [Dokdonella immobilis] >SFN10012.1 Uncaracterized surface protein containing fasciclin (FAS1) repeats [Dokdonella immobilis]) HSP 1 Score: 78.2 bits (191), Expect = 4.000e-11 Identity = 65/179 (36.31%), Postives = 92/179 (51.40%), Query Frame = 0 Query: 60 AARVPATPVTAVSAAIKAGGDYYPGQVDYGNSKIDVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLKDKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTPQ 237 AA V A P+TA + G ++ ++K D+ DT G F LA AL GL L K G F ++APTD AF K AG V+ LLKDK LT +L YHVV VK + + +L + T+ G V ++V DG+ V+ +N +D++A NG +H I +L P+ Sbjct: 9 AAAVAAAPMTA-----------FAGDMNKMDTKKDIVDTAVAAGSFKTLATALEAAGLVDTL-KGPGPFTVFAPTDAAFAKLPAGTVEGLLKDKPKLTAILTYHVVAGNVKAADVV---KLDSAKTVNGQSVAIKV---VDGK--VMVDNATVT----TADVEASNGVIHVIDTVLLPK 163
BLAST of NO25G01420 vs. NCBI_GenBank
Match: BAJ64569.1 (hypothetical protein ANT_25430 [Anaerolinea thermophila UNI-1]) HSP 1 Score: 77.8 bits (190), Expect = 5.200e-11 Identity = 59/146 (40.41%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 94 DVFDTVKTNGKFNQLAKALAETGLDKALAKENGIFCLYAPTDEAFDK--AGGVDELLK--DKAALTEVLKYHVVKLFVKDKEHIRSFRLSNKVTLQGGKVRVQVKANPDGESFVIFNNGEAECVDGLSDIDAVNGHVHGISGILTP 236 D+ DT NG FN LA AL GL L K G F ++APTDEAF K AG VD LLK +K L ++L YHV+ VK E +++ L T+QG V+++ + G+ FV A+ V L+D+ A NG +H I ++ P Sbjct: 350 DIVDTAVENGSFNTLAAALQAAGLVDTL-KGKGPFTVFAPTDEAFAKLPAGTVDNLLKPENKDLLVKILTYHVIPGKVKAAEVVKASELK---TVQGFPVQIRTEG---GKVFV----DNAQVV--LTDVRASNGIIHVIDTVILP 482 The following BLAST results are available for this feature:
BLAST of NO25G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO25G01420 ID=NO25G01420|Name=NO25G01420|organism=Nannochloropsis oceanica|type=gene|length=5022bpback to top protein sequence of NO25G01420.1 >NO25G01420.1-protein ID=NO25G01420.1-protein|Name=NO25G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=245bpback to top Synonyms
Publications
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