NO24G02090, NO24G02090 (gene) Nannochloropsis oceanica

Overview
NameNO24G02090
Unique NameNO24G02090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3966
Alignment locationchr24:555693..559658 -

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Properties
Property NameValue
DescriptionSubtilisin-like protease 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:555693..559658 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR036852Peptidase_S8/S53_dom_sf
IPR000209Peptidase_S8/S53_dom
IPR015500Peptidase_S8_subtilisin-rel
Homology
BLAST of NO24G02090 vs. NCBI_GenBank
Match: XP_005852656.1 (proprotein convertase subtilisin kexin type 9 preproprotein [Nannochloropsis gaditana CCMP526] >EKU23177.1 proprotein convertase subtilisin kexin type 9 preproprotein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 206.8 bits (525), Expect = 1.200e-49
Identity = 133/325 (40.92%), Postives = 183/325 (56.31%), Query Frame = 0
Query:   92 SPFVYNWGNDRSNQI-VGMDQNRLQCKSGGTDVDIFILDTGCRPDHDEFMGRATTESVTM-DNG---SKPYGS--GRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGAS-------------GKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVL-----AGAPGRSCTNAALIAKLSNPRVVIE-QGGALQKRARPDRPLFYLPPDA--NVQCP 389
            +P   NWG DR NQ+ + +D++   C S G  V IF +DTGCR  H EF GRA TESV + D+G    +PY +  G D HGHGTH A  AAG +VGVA +A +RC+K L  +G G+L+H VA L  +   + A P+  +V SLS+ A     ++ AV  L  LG+  VVAAGN      + SPA    AITVGA+              K D +E++SN G  VDIYAPG  I+SA  ++  +Y Y +GTS A P V G +ACVL     A  P    ++++L+  L NP + ++ +    Q      RP  Y+PP A  +++CP
Sbjct:  296 APDDINWGLDRINQLGLDLDRDTRTCHSRGKGVIIFSVDTGCRTSHQEFGGRARTESVRLPDSGLQDPEPYAATGGADDHGHGTHTAAVAAGASVGVAPEAEIRCIKALDQNGVGRLAHTVAALEMIAAARLATPSTPMVASLSISAPADAAMDAAVARLQALGVVVVVAAGNEGRWVEKYSPAGEPSAITVGATQPPSGGKLFLFNREKGDSREAYSNQGTAVDIYAPGTNIFSAGIENDQAYGYRTGTSQAAPFVTGAIACVLGDALAANGPVACRSSSSLLEALINPNIEVKHRTRGPQSFGDNKRPFLYVPPGAKYDLRCP 620          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: EWM23228.1 (proprotein convertase subtilisin kexin type 9 preproprotein [Nannochloropsis gaditana])

HSP 1 Score: 206.8 bits (525), Expect = 1.200e-49
Identity = 133/325 (40.92%), Postives = 183/325 (56.31%), Query Frame = 0
Query:   92 SPFVYNWGNDRSNQI-VGMDQNRLQCKSGGTDVDIFILDTGCRPDHDEFMGRATTESVTM-DNG---SKPYGS--GRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGAS-------------GKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVL-----AGAPGRSCTNAALIAKLSNPRVVIE-QGGALQKRARPDRPLFYLPPDA--NVQCP 389
            +P   NWG DR NQ+ + +D++   C S G  V IF +DTGCR  H EF GRA TESV + D+G    +PY +  G D HGHGTH A  AAG +VGVA +A +RC+K L  +G G+L+H VA L  +   + A P+  +V SLS+ A     ++ AV  L  LG+  VVAAGN      + SPA    AITVGA+              K D +E++SN G  VDIYAPG  I+SA  ++  +Y Y +GTS A P V G +ACVL     A  P    ++++L+  L NP + ++ +    Q      RP  Y+PP A  +++CP
Sbjct:  289 APDDINWGLDRINQLGLDLDRDTRTCHSRGKGVIIFSVDTGCRTSHQEFGGRARTESVRLPDSGLQDPEPYAATGGADDHGHGTHTAAVAAGASVGVAPEAEIRCIKALDQNGVGRLAHTVAALEMIAAARLATPSTPMVASLSISAPADAAMDAAVARLQALGVVVVVAAGNEGRWVEKYSPAGEPSAITVGATQPPSGGKLFLFNREKGDSREAYSNQGTAVDIYAPGTNIFSAGIENDQAYGYRTGTSQAAPFVTGAIACVLGDALAANGPVACRSSSSLLEALINPNIEVKHRTRGPQSFGDNKRPFLYVPPGAKYDLRCP 613          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: KIM35761.1 (hypothetical protein M413DRAFT_32226 [Hebeloma cylindrosporum h7])

HSP 1 Score: 188.0 bits (476), Expect = 5.700e-44
Identity = 119/238 (50.00%), Postives = 155/238 (65.13%), Query Frame = 0
Query:  118 SGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALIAKLSN 356
            S G+ VDI+I+DTG    H +F GRAT  +        PY + RDG+GHGTHCAGTAAG   GVA+ A +  VKVLSD+GSG +S +V+GLN+V    +A+  R  +VS+SLG G + +++NAV +LT  GI   VAAGNSN DA+ TSPA +  A TVGAS   D + SFSN+G VVDI+APG  + SA   S +    +SGTSMATP VAG +A ++      + T AA+  KL N
Sbjct:  135 SAGSGVDIYIVDTGVLTTHTQFGGRATWGAT-----FGPY-ADRDGNGHGTHCAGTAAGSQFGVAKAANIIAVKVLSDAGSGAVSDIVSGLNFVLSSARAS-GRPSIVSMSLGGGVSTSLDNAVASLTNAGIHVAVAAGNSNADAANTSPARAPSANTVGASTIADARASFSNFGAVVDIFAPGQNVISAWIRSNTDTNNISGTSMATPHVAGLIAYLI--RLQGNITPAAMSTKLKN 363          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: XP_001839613.2 (hypothetical protein CC1G_10606 [Coprinopsis cinerea okayama7#130] >EAU82204.2 hypothetical protein CC1G_10606 [Coprinopsis cinerea okayama7#130])

HSP 1 Score: 186.0 bits (471), Expect = 2.200e-43
Identity = 117/236 (49.58%), Postives = 148/236 (62.71%), Query Frame = 0
Query:  118 SGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALIAKL 354
            SGG  VDI++LDTG R  H EF GRA + +V    G  P     DG GHGTHCAGTAAG NVGVA+ A +  V+VLSDSGSG +S+VV+G+N++         R  VV ++LG G +  ++NAV  LT  GI  V AAG SN     TSPA     ITVGA+  TD + SFSN+G  +DI+APG  +YSA   S ++Y  +SGTSMA   VAG +A  L G  G + + AA+ AKL
Sbjct:  109 SGGAGVDIYVLDTGVRLTHVEFEGRARSGAVF--GGYAP----TDGQGHGTHCAGTAAGRNVGVAKKANIVSVRVLSDSGSGSVSNVVSGINWI-YTAATTSGRPAVVLIALGGGASSAVDNAVTALTNAGIHVVAAAGGSNTGTENTSPARVPSVITVGATAITDARSSFSNYGPGIDIFAPGQSVYSAWHTSDTAYQTLSGTSMAAAHVAGAIA-YLIGLEG-NVSPAAMEAKL 335          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: XP_007359794.1 (serine protease [Dichomitus squalens LYAD-421 SS1] >EJF66736.1 serine protease [Dichomitus squalens LYAD-421 SS1])

HSP 1 Score: 186.0 bits (471), Expect = 2.200e-43
Identity = 118/250 (47.20%), Postives = 154/250 (61.60%), Query Frame = 0
Query:   98 WGNDRSNQIVGM-DQNRLQC-------KSGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYG--SGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLA 338
            WG  R +Q   + DQN            S G+ VDI+I+DTG    H EF GRAT  +         +G  +  DGHGHGTH +GTAAG   GVA+ A +  VKVLSDSGSG +S +V+GLN+VG+ + A   R  + SLSLG G +QT+++AV  LT  G+   VAAGNSN DAS +SPA +   ITVGAS   D + SFSN+G VVDI+ PG  + S+     ++   +SGTSMATP +AG VA ++A
Sbjct:  117 WGLQRISQAAKLADQNTSDLTFTYTYDDSAGSGVDIYIVDTGIYTAHSEFGGRATWGAT--------FGGYADADGHGHGTHVSGTAAGATYGVAKKAKLFAVKVLSDSGSGYVSDIVSGLNWVGQ-QAAASGRPSIASLSLGGGTSQTLDDAVTALTTQGVHVTVAAGNSNTDASTSSPARAPAVITVGASTIADARASFSNYGSVVDIFGPGQNVISSWIGGVNATNNISGTSMATPHIAGLVATIIA 357          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: XP_001839599.1 (serine protease [Coprinopsis cinerea okayama7#130] >EAU82190.1 serine protease [Coprinopsis cinerea okayama7#130])

HSP 1 Score: 185.7 bits (470), Expect = 2.800e-43
Identity = 118/241 (48.96%), Postives = 151/241 (62.66%), Query Frame = 0
Query:  118 SGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALIAKLSNPRV 359
            S G  VDI++LDTG R  H +F GRA         G+   G+  DGHGHGTHCAGTAAG   GVA+ A +  V+VL+ SGSG  S +V+GLN+V   +  N  R  VVS+SLG   +  ++NAV  LT  G+  VVAAGNSN +A+ TSPA +  AITV AS   D K S+SN+G +VD++APG  + SA   S S+   +SGTSMATP VAG VA  L G  G + + AA+  K+ N  V
Sbjct:  137 SAGAGVDIYVLDTGVRVTHSQFGGRARW-------GTSFVGASTDGHGHGTHCAGTAAGSQFGVAKRANIIAVQVLNSSGSGATSGIVSGLNWV-LTQARNSGRPSVVSMSLGGSASTALDNAVAQLTSAGVHVVVAAGNSNTNAANTSPARAPSAITVAASTIADAKASYSNYGAIVDVWAPGSNVISAWIGSDSATNSISGTSMATPHVAGLVA-YLIGRDG-NVSPAAMATKIINSSV 367          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: ANS72700.1 (proprotein convertase subtilisin/kexin type 9-1 [Stichopus monotuberculatus] >ANS72702.1 proprotein convertase subtilisin/kexin type 9-1 [Stichopus monotuberculatus])

HSP 1 Score: 184.5 bits (467), Expect = 6.300e-43
Identity = 121/280 (43.21%), Postives = 158/280 (56.43%), Query Frame = 0
Query:   98 WGNDRSNQIVGMDQNRLQCKSGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALIAKLSNPRVVIEQGGALQKRARPDRPLF 378
            WG DR +Q      N    K  G+ V +++LDTG   +H++F GRA+T S +MD  S P  +G D HGHGTHCAGT  G + GVA+  T+  V+VL   GSG  S +V G+NYVG    +      V S+SLG G + T +NAV  L   G+P +VAAGN N DA   SPA +  A TVGA+  +D+  SFSNWG  VDI+APG  + SA+  S    T MSGTSMA P  AG  A   A     S   +AL    S+ ++    G  L K + P+  L+
Sbjct:  104 WGLDRIDQRSLPLNNGYSPKGTGSGVSVYVLDTGINANHNDFGGRASTSS-SMDFHSNP-NNGVDCHGHGTHCAGTVGGSSYGVAKSVTLYGVRVLGCWGSGSTSGIVDGMNYVGGRSGSR-----VASMSLGGGASITTDNAVTNLYNNGVPVIVAAGNENQDACNVSPARASRAYTVGATDSSDKIASFSNWGTCVDIFAPGVDVRSASHSSNYGSTTMSGTSMACPHTAGAAAIERASTSSVSSIYSALTNNASSNKI---SGLTLSKSSSPNLLLY 373          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: OSX79386.1 (hypothetical protein BU14_0077s0006 [Porphyra umbilicalis])

HSP 1 Score: 184.1 bits (466), Expect = 8.200e-43
Identity = 118/264 (44.70%), Postives = 157/264 (59.47%), Query Frame = 0
Query:   98 WGNDRSNQ-IVGMDQN-RLQC-KSGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGF---TQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLA-GAPGRSCTNAALIAKLS 355
            WG DR +Q  + +D +    C  S G  VD+F+LDTGCR  H++F GRAT+    +  G     +G DG+GHGTHCAGT  G+  GVA+ AT+RC+KVL+D GSG  S ++AG+  V  +K A P+R VV+S+SLG      +   + AVD    LG+  VVAAGNS +DA   +PA +  AITV      D+    SN G+ VD+ APG  I SA   S     ++SGTSMA P VAG VA +L   A G   T+A + A L+
Sbjct:  142 WGLDRIDQPSLPLDGSYTYDCFPSAGAGVDVFVLDTGCRVSHEQFGGRATSVGAAVSRGRT--ATGADGNGHGTHCAGTVGGVESGVAKAATLRCIKVLNDRGSGSFSDILAGIEAVAAFKVARPSRRVVMSMSLGGRARPGSSAEDTAVDRAAALGVIPVVAAGNSAIDACAFTPARAASAITVANGDINDRVARSSNTGRCVDVIAPGTQILSADARSDGGLRFLSGTSMAAPHVAGIVALLLGERADGADLTSADVKALLA 403          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: PPQ63335.1 (hypothetical protein CVT24_006708 [Panaeolus cyanescens])

HSP 1 Score: 184.1 bits (466), Expect = 8.200e-43
Identity = 119/238 (50.00%), Postives = 152/238 (63.87%), Query Frame = 0
Query:  118 SGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALIAKLSN 356
            S G  VDI+I+DTG    H +F GRA   +   + G+       DGHGHGTHCAGTAAG   GVA+ A +  VKVLSDSGSG  S +V+GLN+V    +A+  R  VVS+SLG     T++NAV +LT  GI  V AAGNSN +A+ TSPA +  AITVGAS   D + SFSN+G VVD++APG G+ SA   S S+   +SGTSMA P +AG VA  L G  G + + AA+  K+ +
Sbjct:  136 SAGRGVDIYIVDTGIYTSHSDFGGRARWGASFNNLGNS------DGHGHGTHCAGTAAGTRYGVAKGANLIAVKVLSDSGSGATSGIVSGLNWVLSQARAS-GRPSVVSMSLGGSTATTLDNAVASLTSAGIHVVAAAGNSNTNAANTSPARAPSAITVGASTIGDVRSSFSNYGAVVDVFAPGTGVTSAWIGSTSATNNISGTSMAAPHIAGLVA-YLIGKDG-NVSPAAMETKIKS 364          
BLAST of NO24G02090 vs. NCBI_GenBank
Match: PPQ67557.1 (hypothetical protein CVT24_002837 [Panaeolus cyanescens])

HSP 1 Score: 184.1 bits (466), Expect = 8.200e-43
Identity = 119/238 (50.00%), Postives = 152/238 (63.87%), Query Frame = 0
Query:  118 SGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALIAKLSN 356
            S G  VDI+I+DTG    H +F GRA   +   + G+       DGHGHGTHCAGTAAG   GVA+ A +  VKVLSDSGSG  S +V+GLN+V    +A+  R  VVS+SLG     T++NAV +LT  GI  V AAGNSN +A+ TSPA +  AITVGAS   D + SFSN+G VVD++APG G+ SA   S S+   +SGTSMA P +AG VA  L G  G + + AA+  K+ +
Sbjct:  136 SAGRGVDIYIVDTGIYTSHSDFGGRARWGASFNNLGNS------DGHGHGTHCAGTAAGTRYGVAKGANLIAVKVLSDSGSGATSGIVSGLNWVLSQARAS-GRPSVVSMSLGGSTATTLDNAVASLTSAGIHVVAAAGNSNTNAANTSPARAPSAITVGASTIGDVRSSFSNYGAVVDVFAPGTGVTSAWIGSTSATNNISGTSMAAPHIAGLVA-YLIGKDG-NVSPAAMETKIKS 364          
The following BLAST results are available for this feature:
BLAST of NO24G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852656.11.200e-4940.92proprotein convertase subtilisin kexin type 9 prep... [more]
EWM23228.11.200e-4940.92proprotein convertase subtilisin kexin type 9 prep... [more]
KIM35761.15.700e-4450.00hypothetical protein M413DRAFT_32226 [Hebeloma cyl... [more]
XP_001839613.22.200e-4349.58hypothetical protein CC1G_10606 [Coprinopsis ciner... [more]
XP_007359794.12.200e-4347.20serine protease [Dichomitus squalens LYAD-421 SS1]... [more]
XP_001839599.12.800e-4348.96serine protease [Coprinopsis cinerea okayama7#130]... [more]
ANS72700.16.300e-4343.21proprotein convertase subtilisin/kexin type 9-1 [S... [more]
OSX79386.18.200e-4344.70hypothetical protein BU14_0077s0006 [Porphyra umbi... [more]
PPQ63335.18.200e-4350.00hypothetical protein CVT24_006708 [Panaeolus cyane... [more]
PPQ67557.18.200e-4350.00hypothetical protein CVT24_002837 [Panaeolus cyane... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G02090.2NO24G02090.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G02090.1NO24G02090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598747gene_7431Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100397g1gene6061Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G02090.2NO24G02090.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G02090.1NO24G02090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G02090 ID=NO24G02090|Name=NO24G02090|organism=Nannochloropsis oceanica|type=gene|length=3966bp
GCACCTCATCTCTCCTTCTCCCCAGTAAAGTCTTAGTCATCTTTTCGAAC
CATCGTCGGCCAATGTGTCGCATTCTTAACACAGTGGACATAACAGAGGC
TATTTATATGTGCTTTGTCATTGCCCCCTTCTATAGCCTTTTTCCACCCT
GAGTCATTGATTCTCCCCCATCTCATTCTCTCCACCTCTCGCTCCATCCA
ACGCACACAAGGCCGATTGAAGATCGCCCCTGCCCTAGCGGCACTCTTGA
GGCCATCAGGACGCAATTAAATTCTCCTCGTGAAAGTCTATCCTCGTCCC
TTTCTCCATCGCTCGCGCTGCATCCCCACACAGGTTTTTCGAGTCTGCAA
CCATGCGCCGTCGTCGAAGCCATGTGGCCGCGCTCGCTGTATGGGCCGCC
GCCGCGTTAGCCTTCTGGGGACAAACGGCCTTGGGTCAAAACgtgagtgc
tttctctctctctctttttcgatgtactaaccgcttcgatatctgttaga
atcacgtcagtcacccctgctcttccaccccacaatcccacgaatggttt
ttctgttgtgtatgtagTACGGAGAGGATTGTGAGATGACCGACAAGGGC
GTCATCGAATGCACGCGTACACGGCGAATCCCGGGCAGTGGTGCTGGCGT
CGAAGCGGAGATCTCTGTAGGAGACGGATCAACCACCACGGAGTACGGCC
GGGGCATGCTCATGACCTTCCGAACCGCCAACTGCGCCGAgtacgtcatg
ggttaagggagggtggggggaagaaagggtagaagatcagaagtagcaga
acggaatggacgattgtgagtgagagatacacagaaatgaaaacggacat
ctatatgtgtgggatcagggcagctgggcacgagcacgtggacctcgttg
tctttgtattctctctcgcgtttggggagccacatggtgggggatgagca
gagaggcactagaagtgagagcacgaacctgaatgactgtcaaagtggtg
agcaagtcttcggaatgaccaaaatagtagtcaggaggcttcttatatgg
tcgtcctaattgcctacctttttcaagctaagcttttttctcccgtttct
atcgttaacataatttaattgactcctccctccctccctctctccctccc
ttccttccttccttcctccctactccagCAACCCCACGTGCCGCACCAGT
GTCGAAAGTGAGCTCACCGCCATGGGTTGTGAAGGCTTCACATATTACCC
GTCTATCCAAGCGATGGGGGCCGTGTGCTACTCCCCGGCAGGTTCCACCC
TCCAAGCCAAACGGAATTTCATGTCTGCCCTCCTTAATCTCCGAGCCACG
GCCTCTCCCTTCTCCTCCGCCTCTCTCGATTCCGTGGTCTCCATTGATCC
CGGCCGTGACAACGATCCCACATGGTCCAATGCGGGATGGAATCGCGGAT
CCTGGTGGGGCCGCAATCGCCGCACCCGCACGCCCCGCACCCGCCCCCCC
GAAGTGGTGGTGGGTTGTTCAAGCCGAGAACCCCCTCTCCTACTCCTCGT
CCTCCGCCCCCTCCTGCTCCTGCCCCTCCCCCTCCTGCTCCCTCCCCTCC
TGCTCCTGCTCCTGCTCCTGCTCCTTCCCCCTCCCAAGGCAACAATGGCC
CAGCAGCCCCGGCTCCAAGTCCCACCCCTCTTCTTGAGCCTCCCAGCCCT
TTTGTCTATAATTGGGGGAACGACCGTTCGAATCAGATCGTGGGGATGGA
CCAAAACCGCCTGCAGTGCAAGAGCGGTGGGACAGACGTCGATATCTTTA
TATTGGACACTGgtaggaaaggaaggaggggagtgagggagagagggagg
gagggagggagggaagagggaagggggatgaggacgaaaatataaagagg
ggaagtgggtaaatgacggtactgttagaatatcacaaccggcgacgaaa
gagggcgtcgataattaagcagaacatgaagggggggtagccgtggatcc
tccattcccccctcagcttcacatgcccgagatatgagtagatacacttt
ccccgctctcttattttgtctcactcttctatcctccttctttctctctt
tttgtcccggacgcccatagGTTGTAGGCCGGATCATGACGAATTTATGG
GGCGGGCCACAACCGAGAGTGTGACCATGGACAACGGGAGCAAGCCTTAC
GGATCGGGGAGAGATGGCCACGGGCATGGCACGCACTGTGCGGGGACGGC
TGCAGGCATCAATGTAGGGGTCGCGCGCGATGCCACGGTCCGGTGTGTCA
AGGTGTTGTCGGACTCGGGCTCGGGGCAGCTGTCGCATGTGGTGGCCGGG
TTGAACTATGTGGGGAGGTGGAAGCAGgtaggatgtatgtatgtacgaat
gtatgtttgtgtttccatgtccatgcatccgggcgcgcagctgcggcaga
gggaggaaagcatgaaagatagatggccgatgtgtttgttgtagcacttt
tggtccctttttccccatcttcgatcttattgcgacactctttcgccaat
tatctggttatttattcacgtgtcatgttctataatctgatccgctgttc
atccttactaatataattttttccatctttccgtcttttttttcatctgc
agGCAAACCCCAACAGGATGGTCGTGGTTTCCCTTTCCCTCGGCGCAGGT
TTCACGCAAACTATCAACAATGCCGTCGACACTCTCACGCGGCTGGGCAT
CCCAGCGGTGGTTGCAGCAGGAAATTCCAACGTTGATGCCTCCCAAACCA
GCCCAGCTTCCTCAGTGGGAGCCATCACTGTCGGGGCCTCCGGAAAGACC
GATCAAAAAGAATgtaagttagggttcttaaattctacgttcccatggtg
gtcagtggtttgctctcaatatagagctggtcgataaacgcgtcaaattt
atggcttcaacgcctgtataaagtagggcagggatctataagtgtatgcg
ttacaattaccgcacttatcaaccatcaaatcgacaatttacttgatcat
ccataatccccttctttccatctactctcagCCTTTAGCAACTGGGGCCA
AGTTGTCGACATTTACGCCCCTGGCGGAGGCATCTACTCCGCTACACCCG
ATAGCCGCAGCTCATACACGTATATGAGTGGCACCTCCATGGCTACTCCC
ATGGTGGCTGGTGGCGTGGCATGTGTCCTGGCAGGCGCCCCGGGCAGGAG
CTGCACGAATGCTGCGTTGATAGCCAAGTTGAGTAATCCCCGTGTGGTCA
TTGAGCAGGGGGGTGCACTCCAGAAGAGAGCTCGTCCAGATAGGCCTTTG
TTCTACCTGCCTCCGGATGCGAATGTGCAATGCCCATAGAAGAAAAAAGA
TGTCTGCACCTCTTGGGAGAGCAACAGAGAAGAAAAAAGGATAGAGGAAT
GAAATGAATGAAGATACTTTGCGAAGAGAGCGTGTTAAGCATGAGGCCTA
GTGAATGGGAGGGTGGACAGGAATGGTTGAACGCGGGCAGTTCGAAACGT
GGGGATGGAGGTGGATGGGTTTGAACGAGAAATATTGCAGGACTGGGATG
CAGGAAAGCCGAGAATGTAATAATCTGATGCTATGATGTGATAGGAAGAA
TAGGCCAGGAGAGTATGATGGAAGTGAAAGAGATGTTTACGACCGGATAT
ATTGAATTGACGGCTTGATTAGGAGGAGAGGAAACAGAACGACACAGACA
ACAGATGTATATGCCCCCGGTACGGGGGAGATACTTGCAGAGGGTAACTT
GCAAGCCCAAATTGGCAAAAACTAATCCCGTAAATGGTTTACACAAACAC
GACACATTACATGAGAGAAAGGAATGAAGTAATGGCACAAAGTAGGATAA
AGAAGGCGCGATGCAATTAAAAAAAGAAGTGGGACAGGAAAGAACAGAAG
TTTCCAAGAATCTAGA
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protein sequence of NO24G02090.2

>NO24G02090.2-protein ID=NO24G02090.2-protein|Name=NO24G02090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=389bp
MVQCGMESRILVGPQSPHPHAPHPPPRSGGGLFKPRTPSPTPRPPPPPAP
APPPPAPSPPAPAPAPAPSPSQGNNGPAAPAPSPTPLLEPPSPFVYNWGN
DRSNQIVGMDQNRLQCKSGGTDVDIFILDTGCRPDHDEFMGRATTESVTM
DNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQ
LSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIP
AVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAP
GGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALI
AKLSNPRVVIEQGGALQKRARPDRPLFYLPPDANVQCP*
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protein sequence of NO24G02090.1

>NO24G02090.1-protein ID=NO24G02090.1-protein|Name=NO24G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bp
MVQCGMESRILVGPQSPHPHAPHPPPRSGGGLFKPRTPSPTPRPPPPPAP
APPPPAPSPPAPAPAPAPSPSQGNNGPAAPAPSPTPLLEPPSPFVYNWGN
DRSNQIVGMDQNRLQCKSGGTDVDIFILDTGCRPDHDEFMGRATTESVTM
DNGSKPYGSGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQ
LSHVVAGLNYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIP
AVVAAGNSNVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAP
GGGIYSATPDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALI
AKLSNPRVVIEQGGALQKRARPDRPLFYLPPDANVQCP*
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