NO24G01880, NO24G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_009034268.1 (hypothetical protein AURANDRAFT_11009, partial [Aureococcus anophagefferens] >EGB10673.1 hypothetical protein AURANDRAFT_11009, partial [Aureococcus anophagefferens]) HSP 1 Score: 164.9 bits (416), Expect = 6.900e-37 Identity = 114/341 (33.43%), Postives = 156/341 (45.75%), Query Frame = 0 Query: 18 FPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLFRPA 359 FP K + F GR VP+L QNE GPC LL+V N LLLQ L++ P+ VSL D++ + +++LE S AA GGD G A + V+E I LLP L G+DVNVRF + FE T L +FD + L HGW D +GG +G +YN+V+ ++V + G + + ++DFL R+ QLT GL LH ++E +L L+ + HFS + K G +Y+LVTD GY+ EA +VW +LDGV G E VDG FR A Sbjct: 13 FPLKTVMF--LGRTVPVLGQNEFGPCALLSVVNALLLQNALELSPDLGSVSLADVVALVGDQILERNSKAA---------------GGD-------GEAALNTRRAVEEAIALLPTLAGGLDVNVRFAGDSLFEFTGCLGIFDLFDLALVHGWRADPSDP----ADGGAAHAALGAKSYNEVIARVVEGRAGNDD--------------------------------------------------------AEAAAMDDFLSRSATQLTYFGLVELHGRLKERQLAALYRNFHFSTIFKYEGHIYVLVTDVGYQHEASIVWEKLDGVDGDTEFVDGEFRVA 269
BLAST of NO24G01880 vs. NCBI_GenBank
Match: GBG25769.1 (Ubiquitin carboxyl-terminal hydrolase MINDY-1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 161.4 bits (407), Expect = 7.600e-36 Identity = 100/339 (29.50%), Postives = 159/339 (46.90%), Query Frame = 0 Query: 17 VFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 V KR+ F R V ++LQNE GPCPL+A+ N+LLL+ L + + + +++ +AN ++E G AD+++ + + E++ +LP L++G+DVNVRF V+ FE +++FD LG+ LFHGWVV ++D + + + N++YNQ M++++A +E G + + E+ + ++E FL T Q T L+ LH TV+E E+C F +NHFS L K G LY LVTD+GY++ + W L+ V G ELV F Sbjct: 53 VHEVKRMAF--LNREVSVVLQNENGPCPLIALVNVLLLRGTLKMHKDRRSIGSENLIAMVANLLVEKN----------------------------GSGADENMQHTMQEMMDILPTLQYGLDVNVRFGGVSLFEFDNHVAIFDLLGVNLFHGWVVDQQDTE--------VYDAIANLSYNQAMDRIIAAREAGSDGQTSSEEL--------------------------------------------VQTLQEAEIIERFLSETASQFTFTALTQLHETVKEREVCVFFRNNHFSTLFKIEGHLYALVTDQGYRDNGMIGWELLNAVDGDTELVSPSF 309
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_002180379.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47787.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 156.4 bits (394), Expect = 2.400e-34 Identity = 122/396 (30.81%), Postives = 173/396 (43.69%), Query Frame = 0 Query: 34 ILLQNEAGPCPLLAVANILLLQRQLDVDPEYTK---VSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTD-VAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLFRPAVEGXXXXXXXXXXXEGRLGGCDHGHAAVGTAMARSLREQ-----EEAEARLIERVMAASLRDVSGQG 421 ILLQNE GPCPLLA AN LLL+ +++ + SL D+ +ANR ++ T A+ VDE++H +P+L++GMDVN +FTD +E T EL+ FD L +RL HGW+ E ++ VGN TYN+++E ++ E G E + + EMD + ++AS AT+ SL+++FL T QLT GL +LH + E+EL F +NH+ L K+ G LY+LVTD GY +VW LD + G E D F+P E L A A+ S + + E L+ ASLRD G G Sbjct: 17 ILLQNENGPCPLLAAANALLLKGVIELPSHCVRNSVASLEDVANVLANRAMQNHQTE---------------------------------AHFVDELMHHIPKLQYGMDVNPKFTDGCTGYEYTSELTAFDMLRVRLVHGWLADPEHDE--------TYTAVGNKTYNELVEWIIKGNEAGTEVEKLQKEMDLLQVRQASLVAKDVSDESPQGTVEAAIVQEDMVKIQAKYDELSELATQG-SLMQNFLEATSHQLTQYGLHVLHEQIHEDELVVFFRNNHYGTLTKRNGMLYILVTDLGYCNAPAIVWEMLDVIDGDTEYADSDFKPPGAKAHLTSGPTLSPEQLLAQASQNDADYNLAVQLSKGDNGSISLDAQEGDLMAAATQASLRDYHGMG 370
BLAST of NO24G01880 vs. NCBI_GenBank
Match: ELT98155.1 (hypothetical protein CAPTEDRAFT_179036 [Capitella teleta]) HSP 1 Score: 152.9 bits (385), Expect = 2.700e-33 Identity = 114/354 (32.20%), Postives = 166/354 (46.89%), Query Frame = 0 Query: 4 TPRSAASASASPL--VFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 T AA SPL V+ K I F + + PI+ QNE GPCPLLA+ N+L+LQ ++ + P +I+I+T + +++E AD + AP K + A + + + + + +L+ G+DVNV+FT V+ FE T E VFD LGI L+HGW+V + E +GN YNQ++EK++ K RE TE+L + E+FL R+ QLT GLS L +TV + +LC F +NHFS L K+ L++LVTD+G+ E++VVW L V G G VD F Sbjct: 16 TGAEAAGPEKSPLQSVYHIKWIYF--NESMYPIVTQNENGPCPLLAIMNLLVLQGKIKMPP------MIEIVT--SGQLME---------YLADCIFEHAP-------KDITEDARLNYEQNMHDAMAVFHKLQTGLDVNVKFTSVSTFEYTSECIVFDLLGIPLYHGWLVDPDSPSE--------VAAIGNCGYNQLVEKIITQKNSAREE----------------------------------------------------LVTEAL-IAEEFLNRSAAQLTYYGLSELSTTVNDGQLCVFFRNNHFSTLFKRKNELFILVTDQGFLTESNVVWETLSNVEGDGHFVDASF 282
BLAST of NO24G01880 vs. NCBI_GenBank
Match: EKC28191.1 (Protein FAM63B [Crassostrea gigas]) HSP 1 Score: 151.4 bits (381), Expect = 7.800e-33 Identity = 105/326 (32.21%), Postives = 155/326 (47.55%), Query Frame = 0 Query: 30 RLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 R VPI+ QNE GPCPLLA+ NILLL+ ++ ++P ++ I+T + + +LE A K + A+ + FE + + + ++ +L+ G+DVNVRFT + FE T E +FD LGI L+HGW+V +D + VGN +YN ++EK+++ +R ++ E+ L E FL RT QLT GL L+STV+EN+LC F +NHFS L K L++LVTD+G+ E +VVW L+ V G G VD F Sbjct: 177 RDVPIITQNENGPCPLLAIMNILLLKGKVKLEPGQEIITPEQIMTYLGDSILE---NAPKNNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLGIPLYHGWLVDPQDTK--------TVEAVGNCSYNLLVEKIIS------DRSSEQPEL-----------------------------------------------VNQALLAEAFLDRTASQLTYHGLYELNSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVVWETLNNVEGDGYFVDAQF 417
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_011440368.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X2 [Crassostrea gigas]) HSP 1 Score: 151.4 bits (381), Expect = 7.800e-33 Identity = 105/326 (32.21%), Postives = 155/326 (47.55%), Query Frame = 0 Query: 30 RLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 R VPI+ QNE GPCPLLA+ NILLL+ ++ ++P ++ I+T + + +LE A K + A+ + FE + + + ++ +L+ G+DVNVRFT + FE T E +FD LGI L+HGW+V +D + VGN +YN ++EK+++ +R ++ E+ L E FL RT QLT GL L+STV+EN+LC F +NHFS L K L++LVTD+G+ E +VVW L+ V G G VD F Sbjct: 177 RDVPIITQNENGPCPLLAIMNILLLKGKVKLEPGQEIITPEQIMTYLGDSILE---NAPKNNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLGIPLYHGWLVDPQDTK--------TVEAVGNCSYNLLVEKIIS------DRSSEQPEL-----------------------------------------------VNQALLAEAFLDRTASQLTYHGLYELNSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVVWETLNNVEGDGYFVDAQF 417
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_019926630.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X1 [Crassostrea gigas]) HSP 1 Score: 151.4 bits (381), Expect = 7.800e-33 Identity = 105/326 (32.21%), Postives = 155/326 (47.55%), Query Frame = 0 Query: 30 RLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 R VPI+ QNE GPCPLLA+ NILLL+ ++ ++P ++ I+T + + +LE A K + A+ + FE + + + ++ +L+ G+DVNVRFT + FE T E +FD LGI L+HGW+V +D + VGN +YN ++EK+++ +R ++ E+ L E FL RT QLT GL L+STV+EN+LC F +NHFS L K L++LVTD+G+ E +VVW L+ V G G VD F Sbjct: 177 RDVPIITQNENGPCPLLAIMNILLLKGKVKLEPGQEIITPEQIMTYLGDSILE---NAPKNNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLGIPLYHGWLVDPQDTK--------TVEAVGNCSYNLLVEKIIS------DRSSEQPEL-----------------------------------------------VNQALLAEAFLDRTASQLTYHGLYELNSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVVWETLNNVEGDGYFVDAQF 417
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_021358443.1 (ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X2 [Mizuhopecten yessoensis] >OWF47944.1 Protein FAM63B [Mizuhopecten yessoensis]) HSP 1 Score: 150.2 bits (378), Expect = 1.700e-32 Identity = 109/349 (31.23%), Postives = 162/349 (46.42%), Query Frame = 0 Query: 7 SAASASASPLVFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 SA+ +S V+ K I + + +P + QNE GPCPL+AV N+LLL+ Q+ + P ++ ++T I N +LE A K T++AV + + + + ++ +L+ G+DVNVRFT V FE T E +FD L I L+HGW+V +++D L +G +YNQ++EK+++ + SS K TE+L L E FL QLT GL L+S V+EN+LC F +NHFS + + L+LLVTD+G+ E +VVW L V G G VD F Sbjct: 196 SASPSSTDGNVYHVKWIAY--KNKEIPTITQNENGPCPLIAVMNVLLLKCQVHLPPNTEVITPDQLMTYIGNCILE---NAPKTQDTSEAVQL-------------------NYQQNMHDAMAVIHKLQTGLDVNVRFTGVNDFEYTPECIIFDLLSIPLYHGWLVDPQEKD--------LITAIGTCSYNQLVEKIISQR---------------------SSDK-------------------------------PETVTEAL-LCESFLDGAAAQLTYHGLCELNSVVKENQLCVFFRNNHFSTMYRHQNELFLLVTDQGFLSERNVVWETLSNVEGDGYFVDANF 459
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_021358442.1 (ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 150.2 bits (378), Expect = 1.700e-32 Identity = 109/349 (31.23%), Postives = 162/349 (46.42%), Query Frame = 0 Query: 7 SAASASASPLVFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 SA+ +S V+ K I + + +P + QNE GPCPL+AV N+LLL+ Q+ + P ++ ++T I N +LE A K T++AV + + + + ++ +L+ G+DVNVRFT V FE T E +FD L I L+HGW+V +++D L +G +YNQ++EK+++ + SS K TE+L L E FL QLT GL L+S V+EN+LC F +NHFS + + L+LLVTD+G+ E +VVW L V G G VD F Sbjct: 196 SASPSSTDGNVYHVKWIAY--KNKEIPTITQNENGPCPLIAVMNVLLLKCQVHLPPNTEVITPDQLMTYIGNCILE---NAPKTQDTSEAVQL-------------------NYQQNMHDAMAVIHKLQTGLDVNVRFTGVNDFEYTPECIIFDLLSIPLYHGWLVDPQEKD--------LITAIGTCSYNQLVEKIISQR---------------------SSDK-------------------------------PETVTEAL-LCESFLDGAAAQLTYHGLCELNSVVKENQLCVFFRNNHFSTMYRHQNELFLLVTDQGFLSERNVVWETLSNVEGDGYFVDANF 459
BLAST of NO24G01880 vs. NCBI_GenBank
Match: XP_022331966.1 (ubiquitin carboxyl-terminal hydrolase MINDY-2-like [Crassostrea virginica]) HSP 1 Score: 149.8 bits (377), Expect = 2.300e-32 Identity = 109/347 (31.41%), Postives = 162/347 (46.69%), Query Frame = 0 Query: 9 ASASASPLVFPTKRIPFGPHGRLVPILLQNEAGPCPLLAVANILLLQRQLDVDPEYTKVSLIDILTGIANRVLEATSTAAKAASTADAVAFEAPGGGDEIAKAVGGHADKHVAYQVDEVIHLLPRLRHGMDVNVRFTDVAAFEPTVELSVFDALGIRLFHGWVVGEEDEDEEGREGGVLAQVVGNMTYNQVMEKLVAMKEGGRERRRQKGEMDRGEGKRASSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATESLSLLEDFLLRTPGQLTLRGLSLLHSTVRENELCGLFHHNHFSVLLKKGGRLYLLVTDEGYKEEAHVVWARLDGVSGAGELVDGLF 356 A ++ P V+ K F R VP++ QNE GPCPLLA+ NILLL+ ++ ++P ++ I+T + + +LE A K + A+ + FE + + + ++ +L+ G+DVNVRFT + FE T E +FD L I L+HGW+V +D + VGN +YNQ++EK++ +R +K E+ L E+FL RT QLT GL L STV+EN+LC F +NHFS L K L++LVTD+G+ E +V+W L+ V G G VD F Sbjct: 150 ADENSEPSVYHIKWNTFDL--RDVPVITQNENGPCPLLAIMNILLLKGKVKLEPGLEIITPEQIMTYLGDCILE---NAPKVNTEAEQLNFE---------------------QNMHDAMAVIHKLQTGLDVNVRFTGIQDFEYTPECIIFDLLRIPLYHGWLVDPQDSR--------TVEAVGNCSYNQLVEKIIG------DRSSEKEEL-----------------------------------------------VNQALLAENFLDRTASQLTYHGLYELQSTVKENQLCVFFRNNHFSTLYKHKNELFVLVTDQGFLNEKNVMWETLNNVEGDGCFVDAQF 409 The following BLAST results are available for this feature:
BLAST of NO24G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01880 ID=NO24G01880|Name=NO24G01880|organism=Nannochloropsis oceanica|type=gene|length=3579bpback to top protein sequence of NO24G01880.1 >NO24G01880.1-protein ID=NO24G01880.1-protein|Name=NO24G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=518bpback to top Synonyms
Publications
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