NO24G01870, NO24G01870 (gene) Nannochloropsis oceanica

Overview
NameNO24G01870
Unique NameNO24G01870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3104
Alignment locationchr24:495274..498377 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein CLEC16A homolog
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:495274..498377 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019155CLEC16A/TT9_N
Homology
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_024375330.1 (protein TRANSPARENT TESTA 9-like isoform X1 [Physcomitrella patens] >PNR54125.1 hypothetical protein PHYPA_007801 [Physcomitrella patens])

HSP 1 Score: 114.0 bits (284), Expect = 1.300e-21
Identity = 72/253 (28.46%), Postives = 132/253 (52.17%), Query Frame = 0
Query:   15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKR---ACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFVM 263
            +V+ +  + +LL++G+   D   F+FF +K ++ TF ++ +  R  P VA Q +Q+LS+++ N + +  ++YL S   IN  + F  D   EE+   Y   LRTI+M++   T   F+  +   + +   PLY  A++   H E MVR A RT+ LS+Y V++  +R+F+T+ A     F E+ + L++   A + L   ++K   +   +  +E  + +I D L +  D+    +  L   +  HI    V+
Sbjct:   36 LVETIRSMAELLIWGD-QHDPTFFDFFMEKQVMATFVRILKANRKSPTVAVQLLQTLSIMIQNIRSEHAIYYLFSNEYINHLITFPYDFRHEELLAYYIIFLRTISMKLDRNTVSFFI--KTDNEEVVSFPLYTEAIKLFHHEESMVRIAVRTITLSVYNVDDESIRMFVTNPAVVH-YFSELVIFLRKQSYALDALVAEVSKLPDSGHMQGRLEGAVAEIGDLLYYCNDIINSGVPALKSIMTKHIMNVLVL 284          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_022588336.1 (hypothetical protein cyc_03003 [Cyclospora cayetanensis] >OEH75543.1 hypothetical protein cyc_03003 [Cyclospora cayetanensis])

HSP 1 Score: 113.6 bits (283), Expect = 1.700e-21
Identity = 70/246 (28.46%), Postives = 129/246 (52.44%), Query Frame = 0
Query:   16 VKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260
            ++ +  I ++L++GE   +   F+ F ++++L  F Q+A  P     V  Q +Q+LS+++ +  ++  ++Y+ S N IN  L    D + EE+   Y + +++++M + P T  LFL+ R       H PLY  A++F    + M+RT  R V L+L+RV++  +R FL     +   F  +   L+   N  F  LT  G TA    A+++  L+I++ L ++QD+    +   +E LA  +  H
Sbjct:   52 IETLRQIAEVLVWGE-QHNRGYFDIFCEQNVLSYFVQLAERPTVPNAVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFEDEEVASWYISFIKSLSMLVNPATIKLFLNERAK-----HFPLYSEAVKFFIAKDSMIRTHCRNVTLTLFRVKDPAIRAFL---VERPIFFSHVACYLREVLNRQFSRLTANGATAPD-LAIQDGALEIEEMLFYIQDIFSLNVEEFSELLAARLLIH 287          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_013336134.1 (hypothetical protein, conserved [Eimeria maxima] >CDJ59486.1 hypothetical protein, conserved [Eimeria maxima])

HSP 1 Score: 110.5 bits (275), Expect = 1.400e-20
Identity = 66/247 (26.72%), Postives = 131/247 (53.04%), Query Frame = 0
Query:   16 VKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQR-TAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260
            ++ +  + ++L++GE   +   F+ F ++++L  F Q+A +P     V  Q +Q+LS+++ +  ++  ++Y+ S N IN  L    D D EE+   Y + ++++++ + P T  LFL+ R       H P+Y  +++F    + MVRT +R V LSL+RV++  +R FL     +   F  +   L+   +GL L LT        R   +++ +L+I++ L ++QD+    +   ++ LA  +  H
Sbjct:   52 IETLRQVAEVLVWGEH-NNRGYFDTFCEQNVLSYFVQLAEQPNVPNTVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFDDEEVASWYVSFIKSLSLLVNPDTIKLFLNERAK-----HFPIYSESVKFFRAKDSMVRTHSRNVTLSLFRVQDPSLRSFL---LERPIFFSHVACYLRELLDGLLLRLTATRAPPPDRDRGIQDAVLEIEEMLFYIQDMFNLGIEQFSDLLAARLLVH 289          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_024399128.1 (protein TRANSPARENT TESTA 9-like isoform X1 [Physcomitrella patens] >PNR37577.1 hypothetical protein PHYPA_020686 [Physcomitrella patens])

HSP 1 Score: 110.5 bits (275), Expect = 1.400e-20
Identity = 70/253 (27.67%), Postives = 133/253 (52.57%), Query Frame = 0
Query:   15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAR--EPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKR---ACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFVM 263
            +V+ +  + +LL++G+   D   F+FF +K ++ TF ++ +       VA Q +Q+LS+++ N + +  ++YL S   IN  + F  +   EE+   Y   LRTI+M++   T   F+  + + + +   PLY  A++F  H E MVR A RT+ LS+YRV++  +R F+T+       F ++ + L++   A +GL   ++K   + + R  +E  + +I D L +  D+    +  L   +  +I    V+
Sbjct:   36 LVETIRSMAELLIWGD-QHDPAFFDFFMEKQVMATFVRILKSSSKTTTVAVQLLQTLSIMIQNIRSEHAIYYLFSNEYINYLITFPFNFQNEELLAYYIIFLRTISMKLDRNTVSFFI--KTNNEEVVSFPLYTEAIKFFHHEEGMVRIAVRTITLSVYRVDDESIRTFVTNPPIVD-YFSDLIVFLRKQSHALDGLVTEVSKYPDSGQLRGRLEGAIAEIGDLLYYCNDIINSNVPALKSIMTKNIMNSLVL 284          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_013247896.1 (hypothetical protein, conserved [Eimeria acervulina] >CDI82872.1 hypothetical protein, conserved [Eimeria acervulina])

HSP 1 Score: 110.2 bits (274), Expect = 1.900e-20
Identity = 69/258 (26.74%), Postives = 133/258 (51.55%), Query Frame = 0
Query:   10 YDAAE------VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260
            YDA +       ++ +  + ++L++GE   +   F+ F ++++L  F Q+A +P     V  Q +Q+LS+++ +  ++  ++Y+ S N IN  L    D D EE+   Y + ++++++ + P T  LFL+ R       H P+Y  +++F    + MVRT  R V LS++RV++  +R FL     +   F  +   L+   +G  L LT     A     V++ +L+I++ L ++QD+    +   +E LA  +  H
Sbjct:   40 YDAVDERNRDFTIETLRQVAEVLVWGEN-NNRGYFDIFCEQNVLSYFVQLAEQPTIPNAVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFDDEEVASWYVSFIKSLSLLVNPDTIKLFLNDRAK-----HFPIYSESVKFFRAKDSMVRTHTRNVTLSIFRVQDLSLRAFL---IERPIFFSHVACYLRELLDGQLLRLT-ANRGASPICGVQDGVLEIEEMLFYIQDIFSLGVEEFSELLAARLLVH 287          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_024399130.1 (protein TRANSPARENT TESTA 9-like isoform X2 [Physcomitrella patens] >XP_024399131.1 protein TRANSPARENT TESTA 9-like isoform X2 [Physcomitrella patens] >XP_024399132.1 protein TRANSPARENT TESTA 9-like isoform X2 [Physcomitrella patens])

HSP 1 Score: 108.6 bits (270), Expect = 5.500e-20
Identity = 69/246 (28.05%), Postives = 129/246 (52.44%), Query Frame = 0
Query:   22 ITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAR--EPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKR---ACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFVM 263
            + +LL++G+   D   F+FF +K ++ TF ++ +       VA Q +Q+LS+++ N + +  ++YL S   IN  + F  +   EE+   Y   LRTI+M++   T   F+  + + + +   PLY  A++F  H E MVR A RT+ LS+YRV++  +R F+T+       F ++ + L++   A +GL   ++K   + + R  +E  + +I D L +  D+    +  L   +  +I    V+
Sbjct:    1 MAELLIWGD-QHDPAFFDFFMEKQVMATFVRILKSSSKTTTVAVQLLQTLSIMIQNIRSEHAIYYLFSNEYINYLITFPFNFQNEELLAYYIIFLRTISMKLDRNTVSFFI--KTNNEEVVSFPLYTEAIKFFHHEEGMVRIAVRTITLSVYRVDDESIRTFVTNPPIVD-YFSDLIVFLRKQSHALDGLVTEVSKYPDSGQLRGRLEGAIAEIGDLLYYCNDIINSNVPALKSIMTKNIMNSLVL 242          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: CBN75744.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 107.5 bits (267), Expect = 1.200e-19
Identity = 71/253 (28.06%), Postives = 132/253 (52.17%), Query Frame = 0
Query:   15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFL-----FFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTK--KGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHF 261
            +++++  I++L+ +GE  +    FEFF +K  +  F +  R   P V  Q +Q +S+L  N +    L+ LLS + IN  +       ++ +D EE    Y  LL+ IA+R++  T P FL+  K +      PLY R++  + H + MVRT+A ++ L ++ V++  +  FLT E +    F +++  ++ A + +   + +  +  ++ + TA++      QD L +VQD+       L+E LA H+  HF
Sbjct:   46 LIEVLRSISELVAFGEAGEGPEYFEFFCEKSTMALFVKALR-LGPAVKTQVVQGVSVLFQNLRSPTSLYMLLSSDHINRLMQPEGGAAELPLDDEEFLTNYIALLKAIAIRLSKETVPFFLNTTKGS-----FPLYSRSIPLIGHPDPMVRTSALSIALQVFSVKDPGVTAFLTREENHIGFFDQLSRLMQDAYSQVLCRMWQDVEPSSSGETTAIDGATSFFQDMLYYVQDVLSVGDSLLSEKLAQHLHRHF 292          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: CDJ49733.1 (hypothetical protein, conserved [Eimeria brunetti])

HSP 1 Score: 105.1 bits (261), Expect = 6.000e-19
Identity = 67/259 (25.87%), Postives = 135/259 (52.12%), Query Frame = 0
Query:   10 YDAAE------VVKIVHLITQLLLYGEGLQDER-MFEFFGQKDLLLTFCQMAREPR--PLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEH 260
            YDA +       ++ +  + ++L++GE  Q+ R  F+ F ++++L  F Q+A +      V  Q +Q+LS+++ +  ++  ++Y+ S N IN  L    D + EE+   Y + ++++++ + P T  LFL+ R       H P+Y  +++F    + MVRT +R V LSL+RV++  +R FL     +   F  +   L+   +G  + LT     A     +++ +L++++ L +VQD+    +   ++ LA  +  H
Sbjct:   40 YDAIDERNGDFTIETLRQVAEVLVWGE--QNNRGYFDIFCEQNVLSYFVQLAEQSTVPNAVKVQLLQTLSIIVQSINKETAVYYMFSNNYINSLLSTKFDFEDEEVASWYVSFIKSLSLLVNPDTIKLFLNERAK-----HFPIYSESVKFFRAKDSMVRTHSRNVTLSLFRVQDPSLRAFL---IERPIFFSHVACYLRELVDGQLIRLT-ASRGASPENGIQDGVLEVEEMLFYVQDIFSLGVEEFSDLLAARLMVH 287          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_635998.1 (armadillo-like helical domain-containing protein [Dictyostelium discoideum AX4] >Q54GS1.1 RecName: Full=Protein CLEC16A homolog >EAL62484.1 armadillo-like helical domain-containing protein [Dictyostelium discoideum AX4])

HSP 1 Score: 104.8 bits (260), Expect = 7.900e-19
Identity = 62/248 (25.00%), Postives = 135/248 (54.44%), Query Frame = 0
Query:   15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQ-MAREPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLKRACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNEPLALHIAEHFV 262
            +V+ +  I +++++G+   D   F+FF +K+++  F Q +A++    V  Q +Q+LS+L+ N + ++ +++LLS N IN+ +    D   EE+ D + +LL+ +++++   T   F +H +        PLY  A++F+ H E M+R A RT+ L++++VE  +MR ++ + ++    F  I   ++R C  L   L K    +  +  +++ + ++ D+  ++ D+       +N  LA    ++ +
Sbjct:   40 IVESLRQIAEVMIWGD-QHDNLFFDFFLEKNIMGFFIQFLAQKTSTEVTIQLLQTLSILVENLRNENSIYFLLSNNYINEIIIHKFDFSSEEVLDYFVSLLKALSLKLDKSTVNFFFNHVEK-----DFPLYTEAIKFVNHKETMIRIAIRTLTLNIFKVENKEMREYIIN-STAVPYFSNIVWFIRRNCMSLSKVLEKSNHDSSYQ--LKDYMDELTDQFYYLHDIFNLGFESMNIVLAEQFIQYLI 278          
BLAST of NO24G01870 vs. NCBI_GenBank
Match: XP_020607380.1 (protein CLEC16A-like [Orbicella faveolata])

HSP 1 Score: 104.4 bits (259), Expect = 1.000e-18
Identity = 55/173 (31.79%), Postives = 99/173 (57.23%), Query Frame = 0
Query:   15 VVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTFCQMAREPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMDVDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALEFLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEAS 188
            +V+ +  I ++L++G+   D R+F+FF +K +L+ F +M  +    +  Q +Q+LS+L  N + +  L+YLLS N +N  +    D   EE+   Y + L+T+++++   T   F +  K+       PLY  A++F  HSE MVR A RT+ L++YRV + +M  F+  + +
Sbjct:   46 LVETLRSIAEILIWGD-QNDSRVFDFFLEKSMLMYFLKMMSQKSNQICVQLLQTLSILFENIRNETSLYYLLSNNSVNSIIIHKFDFSDEEVLAYYISFLKTLSLKLNRHTVHFFFNEHKN-----DFPLYTEAIKFFNHSESMVRIAVRTLTLNVYRVGDKNMLSFIRDKTA 212          
The following BLAST results are available for this feature:
BLAST of NO24G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_024375330.11.300e-2128.46protein TRANSPARENT TESTA 9-like isoform X1 [Physc... [more]
XP_022588336.11.700e-2128.46hypothetical protein cyc_03003 [Cyclospora cayetan... [more]
XP_013336134.11.400e-2026.72hypothetical protein, conserved [Eimeria maxima] >... [more]
XP_024399128.11.400e-2027.67protein TRANSPARENT TESTA 9-like isoform X1 [Physc... [more]
XP_013247896.11.900e-2026.74hypothetical protein, conserved [Eimeria acervulin... [more]
XP_024399130.15.500e-2028.05protein TRANSPARENT TESTA 9-like isoform X2 [Physc... [more]
CBN75744.11.200e-1928.06conserved unknown protein [Ectocarpus siliculosus][more]
CDJ49733.16.000e-1925.87hypothetical protein, conserved [Eimeria brunetti][more]
XP_635998.17.900e-1925.00armadillo-like helical domain-containing protein [... [more]
XP_020607380.11.000e-1831.79protein CLEC16A-like [Orbicella faveolata][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002801NSK002801Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01870.1NO24G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100911g1gene6083Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01870.1NO24G01870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01870 ID=NO24G01870|Name=NO24G01870|organism=Nannochloropsis oceanica|type=gene|length=3104bp
ATGCTCCTAGCCCGACATCCTCGGTTCTACGACGCGgtacggagggagta
gaagaagggcagctcagggcaagatgaagggcagagggtgaaggattaag
ggtggaaggagggatgagggcaagacgaaggacagaggacagcagatgaa
aggagggatgatcgtgagccatcgagcagtactcatcatacatagactca
cgtgacaatgccaaatgtctttttgctccttccctccctcccttcccatc
agGCGGAAGTAGTCAAGATCGTTCACCTCATCACCCAGCTGCTGTTGTAC
GGCGAGGGGCTGCAGGACGAGAGGATGTTTGAGTTCTTTGGACAGAAGGA
CTTGCTGCTGACGTTTTGTCAAATGgtgagggagggaggaaaggaggaag
ggaaggagagatcatttgcatgtatatttcgagatcatacaccaagagca
tgcgtggggtctgcgtctgccaattccattcaatctctccctctacccta
tcttcctccctcccttcctccctcccttcctccctcccttcctccctccc
ttccttcctccctccctccctgcctcagGCCCGCGAGCCCCGCCCTCTCG
TGGCATGTCAAGCCATCCAATCCCTCTCCCTCCTCCTCTTCAACACCAAG
CAAGACGACATGCTTCATTACCTCCTCTCCCGAAACCTCATCAACGATTT
CCTGTTCTTTGACATGGACGTGGATGGGGAGGAGgtgaggagggagggag
ggagagttgccaggggtctcacacgagggagagacatcctctgattctgt
ccctccctccctccctccctccctctctagATCCGAGATCCCTATGCGAA
TCTCTTGAGGACCATCGCCATGCGCATCACCCCCGGCACCGCACCTCTCT
TCCTCGACCACAGGAAGgtatctccctccctccctccctccctccctccc
tctactttacaagggagtagctgttcgatcgattatctcttttcctgact
ttcacctcctgttctcatacaagcctccctgaacaccattccctccctcc
ctcccttccttcctccctccctcccttcctccctccctccctccctccct
tcctcattccctcccttcctccctccctccctccctcccttcctccctcc
ctccctccctccctccctccagAGCGCACAAGGCCTCGCCCATTGCCCCC
TCTACCGTCGGGCGTTGGAATTTCTGGCCCATTCCGAACGCATGGTTCGC
ACTGCCGCACGTACCGTGGTGCTTTCGCTGTATAGAGgtacgtgctctcc
ctcccccctcccttcctccctccctccctcccacttaatttgttgcacac
actgtcgtcttattgctgtacagaaatacgttcccaccctccctctctcc
ctccctccctctttctctcgtgtcgtccatgctccctcaccctaccctcc
atctgtgcagTTGAGGAAACAGACATGCGGCTCTTCCTGACCAGCGAAGC
CTCAAAGAAGGCCCTCTTTCAAGAGATTACTCTCTCGTTGAAACGGGCGT
GTAACGGTCTGTTCCTGCATTTGACGAAGAAAGGACTAACgtgagagcga
aataagggggagagagagggagggaggaaggatgtgaagaaggaaggaag
ggaaatatggacggacttaaatgcaagcgaggcagcaagagggagggagg
gagggagggagggaggaaaggaaggaaggaaggaaggaaggactggaact
aatggactccaacgatccattcaaattcaaacagGGCTCGACAACGGACG
GCGGTTGAGAACGATTTGCTCGACATTCAGgtacatttctcttccccccc
cccccccctccctctctcctcccctcccgtttttcatccattcgcttccg
tctttattccctccccctctccctcccctccctccctccctccctccctc
cacccctctctccagGACGAGCTCTGTTTCGTGCAAGACCTGTGTGAGGG
ACGCTTGCGGTGTTTGAACGAACCTCTCGCACTGCACATTGCCGAACATT
TCGTTATGgtgagaaagggagggagggagcaagggagggtggggggtatg
cagaaaagttattctcgccctagtaatcatttcgtctctcccttccttgc
cccctcccttcctcaccatctcaacgtcatatcttccttcctccctccct
ctctcctctccccctccctcctgccttcctcagggcgtgcttatccctgc
ccttctaaccacacccagCGACATGGACCTCTCCGCCTCGAGGGAGGGAG
GGAGGGAGGGCGGGAGGGAGGAAGGGAGCATTTCTTCCTTCCCGCCTTCC
GCGACCCATGCCCCGAACGAGGAAGAGAAAGGGGGGAGGAAGAGGAGGAG
GAGGAGGAGGACGAGCAGCTGACGGCCTTCCAGCAGGTAGCGCTCTTTAT
CCTTGCCCAGgtcaggagagaggaagggagggagggaggaatggagggag
ggatatgtgatctctccttttgatttgttggtttgtcttttctgttcccc
tgctcaccgcttcccagccccctcatccttcttccctccctccctccctc
cctccctccctccctccctccgcacagATCTACACTTTTATCCACCACCC
TCCCCTCCTCCGTCTCTTGACCCTGACACTCTTCCATCCCCACGACCTTT
CCCTCTTCGCCCTCCCTTCCTCCCTCCCTCCCTCGTCCTCCCTTCCTCCC
TCGGGCCCGAATCTGGTCCGAGCCCGTCTGTTGGGGTGCGGGAAGGAGGG
AGGGTGGGTGGGAGGGAATGCGAAGGAACGCTTGGCGCTGGTGACCGCAT
TGCTTTTATTTCGGGTGATGAGGCACGAGGGGCTGAAGGCGGGAGGGCTT
CTGGCGCTGCTGGGTTTGGTCAGGAGAAGGAGGAGAGGGAGGAGGGGAGG
GAGGAAGAGGGAGGGGAGAGGGAGCGGAGGCTTTCGATTGCGTCGATGCA
CGATGATAACGAGGAGGAGGGTAATTTTGAGGAGGAGGAGGAGGAGGGGG
AAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGCGGAGGGCGGCATTGTTCG
ATAA
back to top

protein sequence of NO24G01870.1

>NO24G01870.1-protein ID=NO24G01870.1-protein|Name=NO24G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MLLARHPRFYDAAEVVKIVHLITQLLLYGEGLQDERMFEFFGQKDLLLTF
CQMAREPRPLVACQAIQSLSLLLFNTKQDDMLHYLLSRNLINDFLFFDMD
VDGEEIRDPYANLLRTIAMRITPGTAPLFLDHRKSAQGLAHCPLYRRALE
FLAHSERMVRTAARTVVLSLYRVEETDMRLFLTSEASKKALFQEITLSLK
RACNGLFLHLTKKGLTARQRTAVENDLLDIQDELCFVQDLCEGRLRCLNE
PLALHIAEHFVMRHGPLRLEGGREGGREGGREHFFLPAFRDPCPERGRER
GEEEEEEEEDEQLTAFQQVALFILAQIYTFIHHPPLLRLLTLTLFHPHDL
SLFALPSSLPPSSSLPPSGPNLVRARLLGCGKEGGWVGGNAKERLALVTA
LLLFRVMRHEGLKAGGLLALLGLVRRRRRGRRGGRKREGRGSGGFRLRRC
TMITRRRVILRRRRRRGKGGREGGREGAEGGIVR*
back to top
Synonyms
Publications