NO24G01830, NO24G01830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO24G01830 vs. NCBI_GenBank
Match: EWM24390.1 (hypothetical protein Naga_100283g5 [Nannochloropsis gaditana]) HSP 1 Score: 456.1 bits (1172), Expect = 2.600e-124 Identity = 347/758 (45.78%), Postives = 403/758 (53.17%), Query Frame = 0 Query: 209 ALSQQGLDEALLAPYAQAIPIIAPVERDEEKRNVHRVREYWLEHEAIKHLPALLSLQLPLATFEQHYLSANAHNVKYARGTLRETVRTFFREHTDDSGVRVLTLKLSERPVCQKPSKNILKRWNLSNGMLYFFYAAVGRAAPPTGKEILEPFYCQKRVDFIRRICGGAMAKGGLGGMGEEELGGAKATTEAGVLEGEEIGRDGGVGMKXXXXXXXXXXXXXXXXXAFQEQLHQM----------GRSRKRRRESNDAPFPLSELYISADTACPPSLPASCEVDGKIVTVKTEDRNEEGKKEEQMIQSLISFLKGHVWKGVEEEAVRAAVAAGTWRLVEEESVDPSLDPSLAYLSRPPRSFWVPSLASLTPLEEGGNGGGEEGREEGVEGWGWENGCLPVFVRACRRNWSRVEAAWEAWNEDLGNNALEWKELWREEVGGKVEKDV--------------------GGMEEEEERFVLFPCGVDGAGTHPEQEN----PVLADSAAAAYTEGGKEGGEEEREGRGRAGGGSIPLSSMPHGQMNSQPSPTYLRRGLSSSIPSTFSSSLPSSVTPARAFPSASAASVADDFFSVAVKQEEXXXXXXXXXXXXSAGVSAATTMEGG------------------------------------EGWGRKGGGRGEEGVMMDFGLDMTDTEFQALLSEVEEEGKGEKQXXXXXXXXXXXXMG-------AREGGGCGYMDESFYFAYPGPQATAAGAGGEAVPI 890 A+ QQG+DE LL Y QA +IAPVERDEEKRNVHRVREYWLEHEAIKHL L +LQ+P+ATFE H+L ANAHN KY RGTLRETVRTFFRE TD++GVRVLTLKLSER V KPSKNILKRWNLSNGMLYFFYAAVGR+APPTG EILEPFY QKRVDFIR++CGG G G+ + E G +GE +G G+ XXXXXXXXX + H P PLSELY+ AD P S V+ V + E+G +E+ + L+SFLK VW GVEE+AVR AV+AG WRLV EES++ DPSLAYL+RP R+FWVPSLA P E G WGWENGCLPVFVRACRRNW++VE WEAWNEDLGNNALEWKEL G +EEE+ F+LFPC ++GA E + V+ D TEG EGG E G + + +P + P R S +PST SSL S TP R+ A D FFSV+V+ E+ XXXXXXXXX EG +MMD GL+M D XXXXXXXXXXX G GGCG +DESFYFAYPGPQ + G+ GE P+ Sbjct: 32 AVGQQGVDETLLRKYHQAADLIAPVERDEEKRNVHRVREYWLEHEAIKHLATLQALQIPVATFESHFLQANAHNPKYVRGTLRETVRTFFREFTDEAGVRVLTLKLSERMVYSKPSKNILKRWNLSNGMLYFFYAAVGRSAPPTGDEILEPFYFQKRVDFIRKVCGGGEGAGSDVGLALSLPPALRPAGERG--QGEAVGGGEGLTEAGVGTAATXXXXXXXXXERHRAGSHDFXXXXXXXXXXXXXXXXXXXXXXXPLPLSELYVPAD-------PVSASVEKAGVKEEAPVEVEDG--DEEAVHLLLSFLKERVWAGVEEKAVRDAVSAGVWRLVAEESLE--ADPSLAYLARPARTFWVPSLA--PPAWEEGK---XXXXXXXXXXWGWENGCLPVFVRACRRNWAKVEGVWEAWNEDLGNNALEWKELXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAGESGRKEEEDSFLLFPCSLEGAQAETENVSMPSMGVMRDGREDV-TEGVTEGGLPEHR------GAPVVFAPVPDPNGDFPPLGYGQTRPFPSLVPSTDPSSLSFSSTPTRSV--TVAPPPGDVFFSVSVEGED--GXXXXXXXXXXXXXXXXXXXEGALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMMMDLGLNMGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTGEVNTSGRGMGEGGCGLVDESFYFAYPGPQ-SEVGSNGEVPPL 759
BLAST of NO24G01830 vs. NCBI_GenBank
Match: XP_005855550.1 (hypothetical protein NGA_0641700 [Nannochloropsis gaditana CCMP526] >EKU20816.1 hypothetical protein NGA_0641700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 402.5 bits (1033), Expect = 3.400e-108 Identity = 332/799 (41.55%), Postives = 392/799 (49.06%), Query Frame = 0 Query: 210 LSQQGLDEALLAPYAQAIPIIAPVERDEEKRNVHRVREYWLEHEAIKHLPALLSLQLPLATFEQHYLSANAHNVKYARGTLRETVRTFFREHTDDSGVRVLTLKLSERPVCQKPSKNILKRWNLSNGMLYFFYAAVGRAAPPTGKEILEPFYCQKRVDFIRRICGG----------------AMAKGGLGGMGEEELGGAKATTEAGVLEGEEIGRDGGVGMKXXXXXXXXXXXXXXXXXAFQEQLHQMGRSRKRRRESND-----------------------APFPLSELYISADTACPPSLPASCEVDGKIVTVKTEDRNEEGKKEEQMIQSLISFLKGHVWKGVEEEAVRAAVAAGTWRLVEEESVDPSLDPSLAYLSRPPRSFWVPSLASLTPLEEGGNGGGEEGREEGVEGWGWENGCLPVFVRACRRNWSRVEAAWEAWNEDLGNNALEWKELWREEVGGKVEKDV--------------------GGMEEEEERFVLFPCGVDGAGTHPEQEN----PVLADSAAAAYTEGGKEGGEEEREGRGRAGGGSIPLSSMPHGQMNSQPSPTYLRRGLSSSIPSTFSSSLPSSVTPARAFPSASAASVADDFFSVAVKQEEXXXXXXXXXXXXSAGVSAATTMEGG-EGWGRKGGGR----------------------------------GEEG-VMMDFGLDMTDTEFQALLSEVEE---------------EGKGEKQXXXXXXXXXXXXMGAREG-----GGCGYMDESFYFAYPGPQATAAGAGGEAVPI 890 ++QQG+DE LL Y QA +IAPVERDEEKRNVHRVREYWLEHEAIKHL L +LQ+P+ATFE H+L ANAHN KY RGTLRETVRTFFRE TD++GVRVLTLKLSER V KPSKNILKRWNLSNGMLYFFYAAVGR+APPTG EILEPFY QKRVDFIR++CGG A+ G G G E +GG + TEAGV G GG+G GR + R S+D P PLSELY+ AD P S V+ V + E+G +E+ + L+SFLK VW GVEE+AVR AV+AG WRLV EES++ DPSLAYL+RP R+FW VE WEAWNEDLGNNALEWKEL G +EEE+ F+LFPC ++G T E + V+ D TEG EGG E G + + +P + P R S +PST SSL S TP R+ A D FFSV+V+ E+ XXXXXXXXX EG + W ++ GEEG +MMD GL+M D QA ++ EG XXXXXXXXXXXX G GGCG +DESFYFAYPGPQ + G+ GE P+ Sbjct: 346 IAQQGVDETLLRKYHQAADLIAPVERDEEKRNVHRVREYWLEHEAIKHLATLQALQIPVATFESHFLQANAHNPKYVRGTLRETVRTFFREFTDEAGVRVLTLKLSERMVYSKPSKNILKRWNLSNGMLYFFYAAVGRSAPPTGDEILEPFYFQKRVDFIRKVCGGGEGAGSDVGLALSLPPALRPAGERGQG-EAVGGGEGLTEAGV--GTAATAAGGLG----------------------------GRGDRHRAGSHDFXXXXXXXXXXXXXXXXXXXXXXXPLPLSELYVPAD-------PVSASVEKAGVKEEAPVEVEDG--DEEAVHLLLSFLKERVWAGVEEKAVRDAVSAGVWRLVAEESLE--ADPSLAYLARPARTFW-------------------------------------------------VEGVWEAWNEDLGNNALEWKELXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAGESGRKEEEDSFLLFPCSLEGPQTETENVSMPSMGVMRDGREDV-TEGVTEGGLPEHR------GAPVVFAPVPDPNGDYPPLVYGQTRPFPSLVPSTDPSSLSFSSTPTRSV--TVAPPPGDVFFSVSVEGED--GXXXXXXXXXXXXXXXXVFQEGALKPWVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEVWEDGEEGRMMMDLGLNMGDATLQAFMAGXXXXDSSSNFLVLHPQGMEGGXXXXXXXXXXXXXXXXEVTMSGRGMGEGGCGLVDESFYFAYPGPQ-SVVGSNGEVPPL 1041 The following BLAST results are available for this feature:
BLAST of NO24G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G01830 ID=NO24G01830|Name=NO24G01830|organism=Nannochloropsis oceanica|type=gene|length=3089bpback to top protein sequence of NO24G01830.1 >NO24G01830.1-protein ID=NO24G01830.1-protein|Name=NO24G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=905bpback to top Synonyms
Publications
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