NO24G01670, NO24G01670 (gene) Nannochloropsis oceanica

Overview
NameNO24G01670
Unique NameNO24G01670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2233
Alignment locationchr24:449323..451555 +

Link to JBrowse

Properties
Property NameValue
DescriptionNad-dependent epimerase dehydratase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:449323..451555 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase_N
Homology
BLAST of NO24G01670 vs. NCBI_GenBank
Match: XP_005855445.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana CCMP526] >EKU20904.1 nad-dependent epimerase dehydratase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 626.3 bits (1614), Expect = 5.800e-176
Identity = 292/354 (82.49%), Postives = 322/354 (90.96%), Query Frame = 0
Query:    1 MRVHVQALAMVAMLATSSAFQMPMTMKAPGTGKKVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTHSPDFECDEMVLAGKK 355
            MR H+ ALA++A++A +  FQ+PMTMKAPG GKKVLIIGGTRFSGLYL+KELHDRGYDITLFNRGKT NR +P ES  ++ ER+G+  +VKGDRTNPDDLAALAKAH+FDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETD VDPKSRHKGK +TETYL E  +PFTSIRPTYIYGPQNYNPLEEYFFHRVVA R V VPGHGQHLTGLGHVKDLATAMAQVIGR+ AKGQ+YNVQHPQA+TFDGA RLAAKAAGKDP  V++VHY+PKE+DFGKKKAFPMRPQHFFTSVEKAMR+LDW P YGN EGW+DSF++DY  +TH PDFECDE+VLAGKK
Sbjct:    1 MRAHIHALALLALMAGALGFQIPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK 354          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: EWM24370.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 610.9 bits (1574), Expect = 2.500e-171
Identity = 292/383 (76.24%), Postives = 322/383 (84.07%), Query Frame = 0
Query:    1 MRVHVQALAMVAMLATSSAF-----------------------------QMPMTMKAPGTGKKVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTHSPDFECDEMVLAGKK 355
            MR H+ ALA++A++A +  F                             Q+PMTMKAPG GKKVLIIGGTRFSGLYL+KELHDRGYDITLFNRGKT NR +P ES  ++ ER+G+  +VKGDRTNPDDLAALAKAH+FDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETD VDPKSRHKGK +TETYL E  +PFTSIRPTYIYGPQNYNPLEEYFFHRVVA R V VPGHGQHLTGLGHVKDLATAMAQVIGR+ AKGQ+YNVQHPQA+TFDGA RLAAKAAGKDP  V++VHY+PKE+DFGKKKAFPMRPQHFFTSVEKAMR+LDW P YGN EGW+DSF++DY  +TH PDFECDE+VLAGKK
Sbjct:    1 MRAHIHALALLALMAGALGFQVRELFVIFMPLALVPMWPFDPLLYLPPPQIPMTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGREQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEPDFECDEVVLAGKK 383          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: CEM27831.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 431.0 bits (1107), Expect = 3.500e-117
Identity = 206/325 (63.38%), Postives = 247/325 (76.00%), Query Frame = 0
Query:   34 KVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTH----SPDFECDEMVLAGKK 355
            KVL+IGG+RFSGLYLW+EL DRG+D+T+FNRGKT  R +P ES + FE R   TK+V GDR N  DL  +A +  FD I+DMNGRE  +T+ L D +  R+ H+VYMSSAGVYLKSD MPH+E DAVDPK RHKGKLD+E YLR I+ P+TSIRPTYIYGP NYNP+EEYFF R+  +RPV +PGHGQHLTGLGHV+DLA   A V+GR HA G+ YN    +AVTFDG ARL A A GKDP  V+LVHYNPK+ DFGKKKAFP RPQHFFTS+E A+R+LDW+P Y N EG +DS++ D+  K        DFE D++VLA  K
Sbjct:   57 KVLLIGGSRFSGLYLWRELLDRGHDVTVFNRGKTALRPIPGESASEFERRKSSTKFVTGDRKNLADLRQVA-SMQFDAIFDMNGREVDETKMLVDLFPNRLKHYVYMSSAGVYLKSDEMPHREGDAVDPKCRHKGKLDSEEYLRSINAPWTSIRPTYIYGPLNYNPVEEYFFERLAQNRPVCIPGHGQHLTGLGHVRDLARQFANVLGRPHAVGKTYNAGGLEAVTFDGVARLCAAAMGKDPSRVELVHYNPKDLDFGKKKAFPFRPQHFFTSIENAIRDLDWLPDYDNLEGLRDSYQNDFVIKQREGKLKNDFETDDIVLAAAK 380          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: CBN74028.1 (38 kDa ribosome-associated protein precursor [Ectocarpus siliculosus])

HSP 1 Score: 426.4 bits (1095), Expect = 8.700e-116
Identity = 197/336 (58.63%), Postives = 250/336 (74.40%), Query Frame = 0
Query:   24 MTMKAPGTGKKVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTH----SPDFECDEMVLAGKKV 356
            + M A    ++VL+IGGTRFSGLYL KELH RG+++ L+NRG+T N+ LP ES A + +RV   K + GDR +P+   +      FD ++DMN RE +DT+ +AD + G+VDH+V+MSSAGVYLKS+LMPH+E DA DPKSRHKGK ++E YL EI MP+TSIRPTYIYGP NYNPLE+YFF R+  DR V+VPGHGQHLTGLGHVKDLA AMA V+G++ AKGQ+YNVQ  +A++FDG  R  A+A GKDP  VK+ H+ P  FDFGKKKAFPMRP HFFTS EKAM +LDW P +   +G +DS+E D+  K      + DFECD+ VL  + +
Sbjct:   42 LRMAAAEGKQRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGQTANKQLPCESDAEYAKRVEDVKTIVGDRKDPEVCQSTLGGEKFDAVFDMNAREVSDTKAVADVFKGKVDHYVFMSSAGVYLKSELMPHREEDATDPKSRHKGKFESEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVKDLARAMANVLGKESAKGQVYNVQDNRAISFDGMVRACAEAMGKDPAAVKIKHFEPTNFDFGKKKAFPMRPGHFFTSCEKAMTDLDWAPEFNTVDGLRDSYENDFVHKKAAGGLNNDFECDDKVLTDQTI 377          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: KOO32302.1 (NAD-dependent epimerase dehydratase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 410.6 bits (1054), Expect = 5.000e-111
Identity = 199/355 (56.06%), Postives = 252/355 (70.99%), Query Frame = 0
Query:   10 MVAMLATSSAFQMPMTMKAPGTG-------KKVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTHSP----DFECDEMVLAGK 354
            +V M+  + AF +    +  G+        K VLI+GGTRFSGLYLW+ELH+RG+ +TL+NRGKT  + +P ES  AFE+R   TKYVKGDR +  D+ A      FDV+YDM GRE  DT+PL + +  +V+HF+YMSSAGVY KS  MPH E D  DPKSRHKGKL+TE  L+   +PFTSIRPTYIYGP NYNPLEE+FF R+ A + + +PGHGQHLTGLGHVKDLA AMA VIG+K A G+IYNVQ  Q+VTF+G A+L A A GKD   V++  YN K FDFG+KKAFPMR QHFF  +++AM++L+W P Y   +G KD++E D+  K  +     DF CD+M+LA K
Sbjct:   10 VVVMMCPADAFSVSGMRRTVGSARASMLNMKDVLIVGGTRFSGLYLWEELHNRGHSVTLYNRGKTALKKIPSESDEAFEKRKAATKYVKGDRKDIADMKAKLGGLKFDVVYDMGGREAGDTEPLIELFGNKVEHFIYMSSAGVYKKSLTMPHFEVDPTDPKSRHKGKLETEDLLKAKGVPFTSIRPTYIYGPLNYNPLEEWFFTRLDAGKDICIPGHGQHLTGLGHVKDLAVAMANVIGKKAAIGKIYNVQDAQSVTFEGLAKLCANAMGKDAEEVRIKTYNKKNFDFGEKKAFPMREQHFFCGIDQAMKDLEWKPQYNMAQGLKDAYENDFVAKKAAGKLNLDFSCDDMILAAK 364          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: WP_026148475.1 (3-beta hydroxysteroid dehydrogenase [Leptolyngbya boryana] >BAS58439.1 NAD-dependent epimerase/dehydratase [Leptolyngbya boryana IAM M-101] >BAS64787.1 NAD-dependent epimerase/dehydratase [Leptolyngbya boryana dg5] >BAY55350.1 NAD-dependent epimerase/dehydratase [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 389.8 bits (1000), Expect = 9.100e-105
Identity = 194/321 (60.44%), Postives = 229/321 (71.34%), Query Frame = 0
Query:   34 KVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTHSP---DFECDEMVLA 352
            ++LI+GGTRF G+YL + L  +G+D+TLFNRG   N+  P E            K V GDRTN DDL  LA   DFD ++D NGRE +DTQPLA+ + GR+ HFVYMSSAGVYLKSD MPH E DAVDPKSRHKGK DTE+YL +  +PFTSIRPTYIYGPQNYN LE +FF R+V DRPV +PGHGQH T  GHVKDLA AMA+V+G + A GQIYNV   + VTFDG AR  A A GKDPG +K+VHY+PK FDFGKKKAFPMR QHFF  V KA+ EL+W P +    G KDSF+ DY +        DF  D+ +LA
Sbjct:    2 RILIMGGTRFIGVYLTQLLVQQGHDVTLFNRG---NKPAPVEG----------VKQVTGDRTNADDLKQLASL-DFDAVFDNNGRELSDTQPLAELFKGRIQHFVYMSSAGVYLKSDQMPHVEGDAVDPKSRHKGKHDTESYLADAGIPFTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPVPIPGHGQHFTQFGHVKDLAAAMAKVLGNQTAIGQIYNVSGTREVTFDGLARACATAVGKDPGSLKIVHYDPKSFDFGKKKAFPMRTQHFFADVHKAITELNWTPEFDLISGLKDSFQNDYLKTGRDRKEIDFSLDDQILA 308          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: XP_005827760.1 (hypothetical protein GUITHDRAFT_96197 [Guillardia theta CCMP2712] >EKX40780.1 hypothetical protein GUITHDRAFT_96197 [Guillardia theta CCMP2712])

HSP 1 Score: 376.3 bits (965), Expect = 1.000e-100
Identity = 188/334 (56.29%), Postives = 238/334 (71.26%), Query Frame = 0
Query:   33 KKVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAY---NGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFT--SIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGR-KHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGK-KKAFPMRPQHFFTSVEKAMRELDWVPVYGN-EEGWKDSFEKDYKQKTHS----PDFECDEMVLAGKK 355
            + VLIIGGTRFSG YLWKEL DRG+ +TL+NRGKT  + LP ES + ++ R+  TKY+ GDR +P+ +  L     +  +YDMNGRE +DT PLAD +      +  F+YMSSAGVY KS  MPH E DAVDPKSRHKGKL+TE YLR +   F   SIRPTYI GPQNYN +E+YF  R  A R  +VPGHG+HLTG GHVKDLA AMA VIGR K   GQ+YN+Q+  A+TFDGA R+AA+  G +P  V++VHYNPKEF F + KKAFPMRPQHFFT+V+KA R+L+W P++ +  E ++DS+  D+  K  +     DF CDE+V + +K
Sbjct:    4 ESVLIIGGTRFSGAYLWKELVDRGHQVTLYNRGKTSPKPLPGESESDYKRRLETTKYLMGDRKDPEQIKNLVDPSLYTYVYDMNGREASDTAPLADLFTTSRSELKSFIYMSSAGVYKKSSEMPHMEHDAVDPKSRHKGKLETEAYLRSLGGNFNWCSIRPTYICGPQNYNVVEQYFLERADAKRGFIVPGHGEHLTGFGHVKDLAVAMANVIGREKKTNGQVYNIQNTNAITFDGACRVAAEVVGTNPDDVEIVHYNPKEFKFPEGKKAFPMRPQHFFTNVDKARRDLEWEPMFNSCREIFQDSYTNDFLLKKAAGKLDNDFTCDEIVFSQRK 337          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: WP_015141031.1 (nucleoside-diphosphate sugar epimerase [Nostoc sp. PCC 7524] >AFY50621.1 nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524])

HSP 1 Score: 374.8 bits (961), Expect = 3.000e-100
Identity = 187/321 (58.26%), Postives = 234/321 (72.90%), Query Frame = 0
Query:   34 KVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDY----KQKTHSPDFECDEMVL 351
            ++LI+GGTRF G+YL + L ++G+++ LFNRG   NR LP+       + VG+   + GDRT+P  L       +FDVI+D NGRE +DTQPLA+ + GRV HF+YMSSAGVYLKSD +PH E D VDPKSRHKGK +TE YL++  +PFTSIRPTYIYGP NYN LE +FF R+V DRP+ +PG+G H+T LGHV+DLATAM+QVIG K A GQIYN+   + VTFDG AR  A+AAGK P  +K+VHY+PK+FDFGK+KAFPMR QHFF SV+KA  +L+W P Y    G  DSFEKDY    + KT   DF  DE +L
Sbjct:    2 RILIMGGTRFIGVYLTQILVEQGHEVVLFNRG---NRPLPN------LQGVGQ---IIGDRTDPTQLKEKLLQENFDVIFDNNGRELSDTQPLAEIFQGRVQHFIYMSSAGVYLKSDQLPHVEGDTVDPKSRHKGKHETEAYLQQQGLPFTSIRPTYIYGPMNYNDLESWFFDRIVRDRPIPIPGNGLHITQLGHVQDLATAMSQVIGNKQAIGQIYNISGDRFVTFDGLARACAQAAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVDKAQTQLNWQPQYDLISGLADSFEKDYLATGRDKTEI-DFSVDEEIL 309          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: WP_035989819.1 (3-beta hydroxysteroid dehydrogenase [Leptolyngbya sp. KIOST-1])

HSP 1 Score: 374.8 bits (961), Expect = 3.000e-100
Identity = 184/321 (57.32%), Postives = 225/321 (70.09%), Query Frame = 0
Query:   34 KVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTHSP---DFECDEMVLA 352
            +VL++GGTRF G+YL K L ++G+++ LFNRG   NR  P          V     + GDRT+ D+L        FD I+D NGRE +DTQPL + + G++ HFVY+SSAGVYLKSD MPH E DAVDPKSRHKGK +TE YL+E  +PFTS+RP YIYGPQNYNPLE++FF RVV DRPV +PG+G HLT LGHV+DLA AMA V+G + A GQIYN+   +AVTFDG AR  A AAG+DP  +K+VHY+PK FDFGK KAFPMR QHFFT+ +KA  EL W P Y    G KDSF+ DY    H     DF  D+ +LA
Sbjct:    2 RVLVMGGTRFIGVYLTKLLIEQGHEVVLFNRG---NRPAP----------VAGVPTIVGDRTDADNLKTQLAGERFDAIFDNNGRELSDTQPLIEIFGGQLQHFVYVSSAGVYLKSDQMPHIEGDAVDPKSRHKGKFETEAYLQEQGVPFTSVRPVYIYGPQNYNPLEQWFFDRVVRDRPVPIPGNGMHLTQLGHVQDLAAAMAAVLGNETAIGQIYNISGEKAVTFDGLARACATAAGRDPDALKIVHYDPKAFDFGKAKAFPMRVQHFFTATDKAQAELGWAPTYDLVTGLKDSFQNDYLASGHDKAEVDFALDDKILA 309          
BLAST of NO24G01670 vs. NCBI_GenBank
Match: WP_017299031.1 (mRNA-binding protein [Nodosilinea nodulosa])

HSP 1 Score: 372.9 bits (956), Expect = 1.100e-99
Identity = 183/321 (57.01%), Postives = 223/321 (69.47%), Query Frame = 0
Query:   34 KVLIIGGTRFSGLYLWKELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDLAALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPLEEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIYNVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRPQHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTHSP---DFECDEMVLA 352
            +VL++GGTRF G+YL K L ++G+++ LFNRG   NR  P E              + GDRT+P  L        FD I+D NGRE +DTQPL + +  ++ HFVY+SSAGVYLKSD MPH E DAVDPKSRHKGK +TE YL+   +PFTS+RP YIYGPQNYNPLE +FF RVV DRPV +PG+G HLT LGHV+DLA AMA V+G + A GQIYN+   +AVTFDG AR  A AAGKDPG +++VHY+PK FDFGK KAFPMR QHFFT+++KA  EL W P Y    G KDSF+ DY    H     DF  D+ +LA
Sbjct:    2 RVLVMGGTRFIGVYLTKLLIEQGHEVVLFNRG---NRPAPVEG----------VPTIVGDRTDPSSLKTQLAGETFDAIFDNNGRELSDTQPLIEMFGSKLQHFVYVSSAGVYLKSDQMPHIEGDAVDPKSRHKGKFETEAYLQAQGVPFTSVRPVYIYGPQNYNPLEAWFFDRVVRDRPVPIPGNGMHLTQLGHVQDLAAAMAAVLGNETAIGQIYNISGEKAVTFDGLARACATAAGKDPGSLQIVHYDPKAFDFGKAKAFPMRVQHFFTAIDKAQAELGWAPTYDLVTGLKDSFQNDYLAAGHDKAEVDFALDDKILA 309          
The following BLAST results are available for this feature:
BLAST of NO24G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855445.15.800e-17682.49nad-dependent epimerase dehydratase [Nannochlorops... [more]
EWM24370.12.500e-17176.24nad-dependent epimerase dehydratase [Nannochlorops... [more]
CEM27831.13.500e-11763.38unnamed protein product [Vitrella brassicaformis C... [more]
CBN74028.18.700e-11658.6338 kDa ribosome-associated protein precursor [Ecto... [more]
KOO32302.15.000e-11156.06NAD-dependent epimerase dehydratase [Chrysochromul... [more]
WP_026148475.19.100e-10560.443-beta hydroxysteroid dehydrogenase [Leptolyngbya ... [more]
XP_005827760.11.000e-10056.29hypothetical protein GUITHDRAFT_96197 [Guillardia ... [more]
WP_015141031.13.000e-10058.26nucleoside-diphosphate sugar epimerase [Nostoc sp.... [more]
WP_035989819.13.000e-10057.323-beta hydroxysteroid dehydrogenase [Leptolyngbya ... [more]
WP_017299031.11.100e-9957.01mRNA-binding protein [Nodosilinea nodulosa][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL040nonsL040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR027ngnoR027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002827NSK002827Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G01670.1NO24G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598589gene_7391Nannochloropsis oceanica (N. oceanica CCMP1779)gene
38gene6105Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G01670.1NO24G01670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G01670 ID=NO24G01670|Name=NO24G01670|organism=Nannochloropsis oceanica|type=gene|length=2233bp
AAATACAGGATCGATTGCGTCGGACCCCGTCTGTACACTCTCGCCCACCA
CCATGCGTGTCCACGTCCAGGCCCTCGCTATGGTGGCCATGTTAGCCACA
TCGTCTGCTTTTCAGgtacgtgattggatggaagggctttttttagctgg
tgctccagcccacccttgcccttgctcgtttgtcctcctgtctgtccggg
gaagggacaactgtagcttgccacgtgtgactataccaatcacgcctgag
tgctagtattgcagtctatgcaagtgagcaagacagtagcccatggatgt
gcttcgggtcgtggtgctgaaaggcgtagcgggtagtctttctctcgtat
catgttctcaaacttacgtcccctcttcaacattaatcttttctagATGC
CCATGACCATGAAGGCCCCCGGTACTGGGAAAAAGGTCCTCATCATTGGA
GGAACACGCTTTAGCGGCCTGTACCTGTGGAAGGAGCTTCATGACCGGgt
acgtgaatgctttccctccctccctctcttcctcccaccctctctgagtg
ccaccgagaagtcaagaatagccagtacaaagtgaagtacccaattgaaa
ggagggtagaatgatcgaatgctacaacattattcttgaggctcatcttc
ctccctccctccctccctccctatctccctctctctctccctccctccag
GGCTATGACATCACCCTTTTCAATCGCGGGAAGACACCCAACCGCGCCTT
GCCCGACGAAAGCCCCGCGGCCTTCGAGGAACGCGTGGGTAAAACCAAGT
ACGTTAAAGGGGATCGAACGAACCCGGACGACCTGGCCGCACTCGCCAAG
GCGCACGATTTCGACGTTATATACGATATGAACGGCCGCGAGAAAACGGA
CACCCAGCCGTTGGCCGATGCGTACAACGGTCGTGTGGATCATTTTGTGT
ACATGTCTTCGGCGGGTGTGTATTTGAAAAGCGACCTGATGCCTCATAAG
GAGACGGATGCAGTGGACCCCAAGAGCCGGCATAAGGGGAAGTTGGACAC
CGAGACCTATTTGCGCGAGATTGATATGCCATTCACCTCGATTCGACCCA
CGTACATCTACGGTCCCCAGAATTATAATCCCCTGGAGGAGTATTTTTTC
CACCGTGTGGTGGCGGACAGGCCGGTGGTGGTGCCTGGGCATGGACAGCA
TCTGACGGGGTTGGGGCACGTGAAGGATTTGGCGACGGCCATGGCACAGG
TGATTGGCCGCAAGCATGCCAAGGGGCAGgtgaggaggagggagggaggg
agggagggagggaggggggggggtaaagaggaaaaggtatggagaggaaa
gggatgaagggagaggatgacaggggtggatatttccacgtagtctctta
accgtcgtatttattcatttatctctccttccctccctcccctcttttgt
ttccaccctccctccctcctagATCTACAACGTGCAGCACCCGCAGGCTG
TGACGTTCGATGGCGCCGCCCGTCTAGCCGCCAAGGCCGCGGGGAAAGAT
CCGGGTATGGTGAAACTCGTGCATTATAACCCCAAGGAGTTTGATTTTGG
GAAGAAGAAGGCCTTTCCAATGCGCCCCCAACACTTCTTCACGTCAGTGG
AAAAGGCGATGCGGGAGCTGGACTGGGTGCCGGTGTATGGGAATGAGGAG
GGATGGAAGGATTCGTTCGAGAAGGATTATAAACAGAAGACGCATTCCCC
TGATTTTGAGTGTGATGAGATGGTGCTGGCAGGGAAGAAAGTGGCGGCTT
AGAAGGAGGGATGGGGGGCGGGGAGGGATAAGGAGGGGTGGGTGGAGGGG
TCGTGGTGGTAGTGTGTGTGTGTGTGTGTGAATGTGTGTGTGTGTGTGTG
TGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGGAAGTGCGTGCG
TATGATAGGTCTAGGGGAAGGGAGGAAGTTTGGTAGGAGAGAGGTGGGCT
TGTTGGTGTCGATTGAGGTGCTGGTATGGAAGAGGAAAAAGGGTCGGCAA
GAGCACGGTGATAGTGCGAAATCCAGGCGTGCAGGAGAGGGGGAAACAAA
AACGCAAAGCGAAGGAGAGAAGGGGAGAAGAGCAGGGCAGAGATCACCTC
TGAACACAAAAAGAAGGGAAGCCGCGTGAATGCCACCTGGGCTACGTGGA
TGACACAAACAAAATCAACGCGTTGACAGCTAA
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protein sequence of NO24G01670.1

>NO24G01670.1-protein ID=NO24G01670.1-protein|Name=NO24G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bp
MRVHVQALAMVAMLATSSAFQMPMTMKAPGTGKKVLIIGGTRFSGLYLWK
ELHDRGYDITLFNRGKTPNRALPDESPAAFEERVGKTKYVKGDRTNPDDL
AALAKAHDFDVIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSD
LMPHKETDAVDPKSRHKGKLDTETYLREIDMPFTSIRPTYIYGPQNYNPL
EEYFFHRVVADRPVVVPGHGQHLTGLGHVKDLATAMAQVIGRKHAKGQIY
NVQHPQAVTFDGAARLAAKAAGKDPGMVKLVHYNPKEFDFGKKKAFPMRP
QHFFTSVEKAMRELDWVPVYGNEEGWKDSFEKDYKQKTHSPDFECDEMVL
AGKKVAA*
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Synonyms
Publications