NO24G00570, NO24G00570 (gene) Nannochloropsis oceanica

Overview
NameNO24G00570
Unique NameNO24G00570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5916
Alignment locationchr24:178647..184562 +

Link to JBrowse

Properties
Property NameValue
DescriptionSignal transduction histidine kinase, core
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:178647..184562 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016772transferase activity, transferring phosphorus-containing groups
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR036784AK/P_DHK_N_sf
IPR036890HATPase_C_sf
IPR005467Sig_transdc_His_kinase_core
IPR018955BCDHK/PDK_N
IPR003594HATPase_C
IPR004358Sig_transdc_His_kin-like_C
Homology
BLAST of NO24G00570 vs. NCBI_GenBank
Match: EWM21123.1 (Signal transduction histidine kinase, core [Nannochloropsis gaditana])

HSP 1 Score: 809.3 bits (2089), Expect = 6.000e-231
Identity = 406/449 (90.42%), Postives = 419/449 (93.32%), Query Frame = 0
Query:    1 MMASSAAMLARSLGRAARRLRGSGGGDARSLSTMPGSNNRHSFQPNTQQRRRPSSSLGSLNYPHVAPDPLADPTVFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPVMREMPSIQLVKTWYVKSFHELRNTPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            MMA   A+L+ ++ +A RR +   GG  R LS +  S+ + S QP+     RPSSSLGSLNY HVAPDPLADP VFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIR AHRVRDLDAIPVMREMPSIQLVKTWYV SFHE+RN PTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPK DYIGLCCLRTSPRDVALTAI+DAK+MCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP
Sbjct:    1 MMAGGVALLSFAVRQAVRRPKCGSGGVLRPLSMLSNSHRQVS-QPHGS--ARPSSSLGSLNYAHVAPDPLADPGVFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRFAHRVRDLDAIPVMREMPSIQLVKTWYVTSFHEIRNAPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKADYIGLCCLRTSPRDVALTAIDDAKFMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 446          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: CBJ48308.1 (pyruvate dehydrogenase kinase [Ectocarpus siliculosus])

HSP 1 Score: 497.3 bits (1279), Expect = 5.100e-137
Identity = 253/414 (61.11%), Postives = 309/414 (74.64%), Query Frame = 0
Query:   50 RRRPSSSLGSLNYPHVAPDPLADPTVFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKY-FGKEENTTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPVMREMPSIQLVKTWYVKSFHELRNTPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSS----------EFYDLE-VHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMP--PIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            RR+ SS  G ++Y  +   P     + DDI   + ++QTGVSLKTL+DTGRG LL  +     +++ +  Q+ML QVA FLHRELPIRLAHRVRDL+++P M    S+Q V+ WYV S+ E+R  P P TV +E  FA LLK IY+RHAPVLLTMARG +ELR+ +    +          +FYD E  H FLD FY+SRIGIR+LIG YL L+E     +IG+ C  TSP  +A  AIEDAK++CTRQ+GDAP+VTLHGRLDLTF+YV  H+HYI+LEL+KNSMRAT +FHG D+M   PIR+VIADGE NEDVVIKV+DEGGGI RS+++RIWSYLFTTADP +Q GF++L    SD    SPLAGLGYGLPISR+YARYFGGDLSI+SMEGYGTDAFVHLSRLG+H EPLP
Sbjct:   74 RRQLSSRGGDVDYSSLMAGP--GTALHDDIMESAARKQTGVSLKTLIDTGRGDLLSGEMGLTGQDSLSTKQKMLIQVASFLHRELPIRLAHRVRDLESVPDMLAQKSVQQVREWYVISYEEIRKFPRPVTVDEEVRFAELLKGIYQRHAPVLLTMARGVWELRESFGPKDASRRGAKNRFGDFYDFERTHTFLDGFYMSRIGIRILIGHYLALQEAGADSWIGMVCQETSPAAIAEAAIEDAKFVCTRQYGDAPDVTLHGRLDLTFSYVPSHLHYIMLELIKNSMRATVDFHGLDEMDNNPIRVVIADGEGNEDVVIKVADEGGGIRRSYMTRIWSYLFTTADPAVQEGFINLGEVESDHAKESPLAGLGYGLPISRSYARYFGGDLSIVSMEGYGTDAFVHLSRLGHHSEPLP 485          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: GAX24648.1 (pyruvate dehydrogenase kinase 2/3/4 [Fistulifera solaris])

HSP 1 Score: 438.3 bits (1126), Expect = 2.800e-119
Identity = 220/368 (59.78%), Postives = 279/368 (75.82%), Query Frame = 0
Query:   87 QTGVSLKTLLDTGRGHLLQKKYFGKE-ENTTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPVMREMPSIQLVKTWYVKSFHELRNTPTP-NTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQ--KYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            QT VSL+ L+ TGRG  L K +  +E E   A+Q +L QVA FL RELPIRLAHR++DL+A+P++R+M S+  V+  Y+KSF E+ +      T  +EA FA++L+NIYERH+ VL+ MARGAYE R+  +   G     + E+H+FLD FYL RIGIR+LIGQYL LR+PP  +Y+G+ C +TSP ++   AI+D+ +MCTR++GDAP+V + G L+LTF Y   H+HYI+LELLKNSMRAT E+HG D D P I++VIADG +NEDVVIKVSDEGGGIPRS+  +IWSYLFTTADP +Q G V  +    D    +PLAGLGYGLPISR+YARYFGGDLSIMSMEGYGTDAFV+L+RLGN  EPLP
Sbjct:   59 QTSVSLQALMRTGRGEYLHKTFAEEEREKHAATQLVLIQVASFLRRELPIRLAHRIQDLEAVPILRDMESVIAVRDLYIKSFLEIMSFDNKIQTAEQEAAFALMLENIYERHSKVLVQMARGAYEFRKAVREEKGPGLELEEEIHHFLDRFYLCRIGIRVLIGQYLALRQPPVENYVGIICSKTSPYEIVKRAIDDSAFMCTRKYGDAPDVIISGSLNLTFPYAPTHLHYIMLELLKNSMRATVEWHGIDSDFPDIKVVIADGAENEDVVIKVSDEGGGIPRSNTKKIWSYLFTTADPSVQEGMVG-TPQGIDHGRDAPLAGLGYGLPISRSYARYFGGDLSIMSMEGYGTDAFVYLARLGNTKEPLP 425          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: GAX27898.1 (pyruvate dehydrogenase kinase 2/3/4 [Fistulifera solaris])

HSP 1 Score: 437.6 bits (1124), Expect = 4.800e-119
Identity = 219/368 (59.51%), Postives = 278/368 (75.54%), Query Frame = 0
Query:   87 QTGVSLKTLLDTGRGHLLQKKYFGKE-ENTTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPVMREMPSIQLVKTWYVKSFHELRNTPTP-NTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQ--KYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            QT VSL+ L+ TGRG  L K +  +E E   A+Q +L QVA FL RELPIRLAHR++DL+ +P++R+M S+  V+  Y+KSF E+ +      T  +EA FA++L+NIYERH+ VL+ MARGAYE R+  +   G     + E+H+FLD FYL RIGIR+LIGQYL LR+PP  +Y+G+ C +TSP ++   AI+D+ +MCTR++GDAP+V + G L+LTF Y   H+HYI+LELLKNSMRAT E+HG D D P I++VIADG +NEDVVIKVSDEGGGIPRS+  +IWSYLFTTADP +Q G V  +    D    +PLAGLGYGLPISR+YARYFGGDLSIMSMEGYGTDAFV+L+RLGN  EPLP
Sbjct:   59 QTSVSLQALMRTGRGEFLHKTFAEEEREKHAATQLVLIQVASFLRRELPIRLAHRIQDLEGVPILRDMESVLAVRDLYIKSFLEIMSFDNKIQTAEQEAAFALMLENIYERHSKVLVQMARGAYEFRKAVREEKGPGLELEEEIHHFLDRFYLCRIGIRVLIGQYLALRQPPVENYVGIICSKTSPYEIVKRAIDDSAFMCTRKYGDAPDVIISGSLNLTFPYAPTHLHYIMLELLKNSMRATVEWHGIDGDFPDIKVVIADGAENEDVVIKVSDEGGGIPRSNTKKIWSYLFTTADPSVQEGMVG-TPQGIDHGRDAPLAGLGYGLPISRSYARYFGGDLSIMSMEGYGTDAFVYLARLGNTKEPLP 425          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: XP_002294094.1 (pyruvate dehydrogenase kinase, partial [Thalassiosira pseudonana CCMP1335] >EED88449.1 pyruvate dehydrogenase kinase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 420.2 bits (1079), Expect = 7.900e-114
Identity = 213/340 (62.65%), Postives = 262/340 (77.06%), Query Frame = 0
Query:  117 ASQQMLQQVACFLHRELPIRLAHRVRDLDAIPVMREMPSIQLVKTWYVKSFHEL----RNTPTPNTVAK-EADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLE-VHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            A+  +L QVA FL RELPIRLAHR++DL  +P++++M S+Q VK  Y  SF E+    ++ PT     + E  FA +L+NIYERH+ VL+ MARGA+ELR+  V    EF  +E  H FLD FY+SRIGIR+LIGQYL LR+PP  +Y+G+ C +TSP ++   AI+DA +MCTR++GDAPEV + GRLD+TF YV  H+HYI+LELLKNSMRAT E+HG D D PPI++VIADG+DNEDV+IKVSDEGGGIPRS++ RIWSYLFTTADPEIQ G V  +    D    SPLAGLGYGLPISR+Y RYFGGDLSIMSMEGYGTD FV+L+RLGN  EPLP
Sbjct:    3 ATPLVLLQVASFLRRELPIRLAHRIQDLSRVPLLQDMKSVQQVKELYTTSFLEIMSVDKHPPTREGQEEWEEHFAKILENIYERHSSVLVQMARGAFELRRDAV----EFELMESTHAFLDRFYISRIGIRVLIGQYLSLRQPPVENYVGIICSKTSPYEIVKRAIDDAAFMCTRKYGDAPEVIITGRLDMTFPYVPTHLHYIMLELLKNSMRATVEYHGVDADYPPIKVVIADGKDNEDVIIKVSDEGGGIPRSNMKRIWSYLFTTADPEIQEGMVAFNENV-DHSIDSPLAGLGYGLPISRSYTRYFGGDLSIMSMEGYGTDCFVYLTRLGNTREPLP 337          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: XP_002180748.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47400.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 418.3 bits (1074), Expect = 3.000e-113
Identity = 210/345 (60.87%), Postives = 263/345 (76.23%), Query Frame = 0
Query:  115 TTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPVMREMPSIQLVKTWYVKSFHELRN-TPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYE----LRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD--DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLS---HPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            + +++ +L QVA FL RELPIRLAHR+RDL+ IP++++M SIQLV+  YVKSF EL +      +  +E  FA L++NIY+RH+ VL+ MA+GAYE    +RQ+  A   E  + E H FLD FYL RIGIR+LIGQYL LR+PP  +Y+G+ C  TSP ++   AI+DA +MCTR++GDAPEV + GRLDLTF YV  H+HYI+LEL+KNSMRAT E+HG D  + PPI+++IADG DNEDVVIKVSDEGGGIPRS++ +IWSYLFTTADP IQ G V  +       D    SPLAGLGYGLPISR+Y RYFGGDLSIMSMEG+GTDAFV+L+RLGN  EP+P
Sbjct:   13 SVSTELVLIQVAGFLRRELPIRLAHRIRDLEGIPLLKDMASIQLVRDLYVKSFLELLSFDKLIQSAEQEEGFAALIENIYDRHSKVLVQMAQGAYEFRSAVRQEKGADGFELQE-ETHRFLDRFYLDRIGIRVLIGQYLALRQPPVENYVGIICSHTSPYEIVKRAIDDAAFMCTRKYGDAPEVIMSGRLDLTFPYVPTHLHYIMLELIKNSMRATVEWHGIDSPEFPPIKVIIADGADNEDVVIKVSDEGGGIPRSNMGKIWSYLFTTADPAIQAGMVGTAGAKGQGQDHGIDSPLAGLGYGLPISRSYCRYFGGDLSIMSMEGFGTDAFVYLTRLGNTSEPVP 356          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: KOO27073.1 (pyruvate dehydrogenase kinase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 404.4 bits (1038), Expect = 4.500e-109
Identity = 216/393 (54.96%), Postives = 268/393 (68.19%), Query Frame = 0
Query:   63 PHVAPDPLADPTVFDDINTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPV-MREMPSIQLVKTWYVKSFHELRNTPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGS--SEFYD-LEVHNFLDAFYLSRIGIRMLIGQYLEL-REPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGT--DDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPL 449
            P  AP P  + T+  ++   +   QT VSLK  LDTG G LL           T  Q+ L Q+A FL RELP+RLA R  +L  +P  +  M S++ V+ WY  SF ++R +  P  VA E  F  LL  IYERHAP L+TMARG +ELR++ +A +   EF D  E+H FLD FY+SRIGIR+LIGQYLEL RE     Y+GL    TSP +V   A+EDA Y+C R+HGDAPEV L GR DLTF+Y+  H++YI+ ELLKNS+RAT E HG+    +P ++++IADGE+NEDVVIK+SDEGGGIPRSH+ RIWSYLFTTA P              D  T +PLAGLGYGLPISR+YARYFGGDL++MSMEG+GTDAF+HL RLGN DEPL
Sbjct:   42 PATAPGPEGE-TLDQELRRLASYGQTSVSLKATLDTGLG-LLLAPACTNSTGLTKRQRTLIQIATFLKRELPVRLARRAVELQQLPEGLHNMRSVKRVREWYEHSFVDIRRSAMPVDVATEQAFHDLLHTIYERHAPTLVTMARGVHELRKEMLATNEKGEFADKREIHTFLDKFYMSRIGIRILIGQYLELHREDQLDGYVGLINRHTSPAEVFRQAVEDATYLCEREHGDAPEVVLMGRTDLTFSYIPSHLYYIMFELLKNSLRATCEHHGSKRQTLPVVKVIIADGENNEDVVIKISDEGGGIPRSHMQRIWSYLFTTAKPAFGGAEDGGFSSFGDHTTDTPLAGLGYGLPISRSYARYFGGDLNLMSMEGHGTDAFLHLPRLGNRDEPL 432          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: XP_005783258.1 (putative pyruvate dehydrogenase kinase [Emiliania huxleyi CCMP1516] >EOD30829.1 putative pyruvate dehydrogenase kinase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 397.5 bits (1020), Expect = 5.500e-107
Identity = 205/341 (60.12%), Postives = 243/341 (71.26%), Query Frame = 0
Query:  116 TASQQMLQQVACFLHRELPIRLAHRVRDLDAIPV-MREMPSIQLVKTWYVKSFHELRNTPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGSSEFYDLE----VHNFLDAFYLSRIGIRMLIGQYLELREPPKPD-YIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTD-DMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            T  Q+ L Q+A FL RELP+RLA RV +L  +P  +  MPS+  V+ WY +SF E+R +  P     EA+F  LL NIY+RHAP L+TMARG +ELRQK  A   E YDL     +H FLD+FY+SRIGIR+LIGQYLEL    +P+ Y+GL    TSP  +A  A+ DA Y+C R HGDAPEV + G    TF Y+  H++Y L ELLKNS+RA  E HG D +MPPI++VIA GE NEDVVIKVSDEGGGIPRSH+ RI+SYLFTTA P    G   +   A D  T SPLAGLGYGLPISR YARYFGGDL+IMSMEGYGTDAF+HLSRLGN  EPLP
Sbjct:    2 TRRQRTLIQIATFLKRELPVRLARRVIELKQLPEGLDAMPSVIRVREWYEQSFVEIRRSKKPVDAEGEAEFCELLHNIYQRHAPTLVTMARGVHELRQKLRAERGEKYDLSDAAPIHGFLDSFYMSRIGIRILIGQYLELHHETQPEGYVGLINRSTSPAFIAEQAMADATYLCERTHGDAPEVLIEGATGCTFTYIPSHLYYCLFELLKNSLRAVCETHGVDGEMPPIKVVIASGEQNEDVVIKVSDEGGGIPRSHMPRIFSYLFTTATPAFDSG-SSIFSSAGDHGTDSPLAGLGYGLPISRTYARYFGGDLNIMSMEGYGTDAFLHLSRLGNRSEPLP 341          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: OEU14695.1 (alpha-ketoacid dehydrogenase kinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 382.5 bits (981), Expect = 1.800e-102
Identity = 203/350 (58.00%), Postives = 245/350 (70.00%), Query Frame = 0
Query:  122 LQQVACFLHRELPIRLAHRVRDLDAIPVMREMPSIQLVKTWYVKSFHELRNTPTPNTVA-KEADFAVLLKNIYERHAPVLLTMARGAYE--------------------LRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVD-LSHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            L QVA FL RELPIRLAHRV+DL+ +P+M++M S++ VK  Y++SF EL         A +E  F+ L++ IYERH+ VL+ MARGAYE                    +R+K V    E    E H FLD FYL RIGIR+LIGQYL LR+PP   Y+G+ C  TSP ++   AI+DA +MCTR++GDAPEV + GRLDLTF YV  H+HYI+LELLKNSMRAT             ++IADG DNEDVVIKVSDEGGGIPRS++ +IWSYLFTTADP IQ G V  + + A D    SPLAGLGYGLPISR+Y RYFGGDLSIMSMEGYGTDAFV+L+RLGN  EP+P
Sbjct:    4 LVQVASFLRRELPIRLAHRVQDLEKVPLMKDMQSVKEVKQLYIQSFLELLEFDKKIVSADQEQAFSRLVEGIYERHSRVLVQMARGAYEFRHHIHKKSTSTKNKSKNTNIRRKDVFAKME----ETHAFLDRFYLCRIGIRVLIGQYLALRQPPVDHYVGIICGVTSPYEIVKRAIDDAAFMCTRKYGDAPEVIMSGRLDLTFPYVPTHLHYIMLELLKNSMRAT-------------VIIADGSDNEDVVIKVSDEGGGIPRSNVKKIWSYLFTTADPSIQEGMVGVVENEAVDHGIDSPLAGLGYGLPISRSYCRYFGGDLSIMSMEGYGTDAFVYLARLGNTKEPVP 336          
BLAST of NO24G00570 vs. NCBI_GenBank
Match: XP_009824900.1 (hypothetical protein H257_02798 [Aphanomyces astaci] >ETV84882.1 hypothetical protein H257_02798 [Aphanomyces astaci])

HSP 1 Score: 380.6 bits (976), Expect = 6.900e-102
Identity = 203/383 (53.00%), Postives = 257/383 (67.10%), Query Frame = 0
Query:   79 INTYSCKRQTGVSLKTLLDTGRGHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPV-MREMPSIQLVKTWYVKSFHELRNTPTPNTVAKEADFAVLLKNIYERHAPVLLTMARGAYELRQKYVAGS---------SEFYDLEVHNFLDAFYLSRIGIRMLIGQYLELREPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLDLTFAYVSEHVHYILLELLKNSMRATAEFHGTDD-MPPIRIVIADGEDNEDVVIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDL-SHPASDFDTASPLAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP 450
            I  Y+ K QTGV+L+  L  G  H+              S   L   A FLH ELPIRL+HRV+DLD +P  + +MPS+QLVK WYVKSF EL   P   T   E  FA L+++I+ERH   L TMARG YEL++  +A           S+ +DL  H FLD FYLSRIGIRML+ Q++ L E  +  ++G  C  TSP +VAL A+  A++MC RQ+GDAPEV LHG  D    +V  H+H++L E+LKNSMRA  EFHG D+ +PPI++V+ADG+DNEDV IK+SDEGGGIPRS + RIWSY++TTA+   ++ F  L      DF   SPLAGLGYGLPISR +ARYFGGDL I+SMEGYGTDA++HL R+G+  EPLP
Sbjct:   20 IMEYAGKSQTGVTLQEFLKFG-SHI--------------SPSKLIHSAKFLHAELPIRLSHRVKDLDTLPYGLCQMPSVQLVKKWYVKSFEELVAFPRVRTSEDERAFAALVESIWERHNGTLYTMARGVYELKKSMLASRSAGKPTLSLSDMHDL--HTFLDKFYLSRIGIRMLMSQHIALHE-RENGWVGCICESTSPAEVALAAVHTARHMCIRQYGDAPEVELHGHTDFVMPFVPSHLHHMLFEVLKNSMRAVVEFHGVDNPLPPIKLVVADGDDNEDVSIKISDEGGGIPRSALPRIWSYMYTTAN---EQAFASLEGDTPMDFGGESPLAGLGYGLPISRLFARYFGGDLQIISMEGYGTDAYLHLKRVGDASEPLP 381          
The following BLAST results are available for this feature:
BLAST of NO24G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21123.16.000e-23190.42Signal transduction histidine kinase, core [Nannoc... [more]
CBJ48308.15.100e-13761.11pyruvate dehydrogenase kinase [Ectocarpus siliculo... [more]
GAX24648.12.800e-11959.78pyruvate dehydrogenase kinase 2/3/4 [Fistulifera s... [more]
GAX27898.14.800e-11959.51pyruvate dehydrogenase kinase 2/3/4 [Fistulifera s... [more]
XP_002294094.17.900e-11462.65pyruvate dehydrogenase kinase, partial [Thalassios... [more]
XP_002180748.13.000e-11360.87predicted protein [Phaeodactylum tricornutum CCAP ... [more]
KOO27073.14.500e-10954.96pyruvate dehydrogenase kinase [Chrysochromulina sp... [more]
XP_005783258.15.500e-10760.12putative pyruvate dehydrogenase kinase [Emiliania ... [more]
OEU14695.11.800e-10258.00alpha-ketoacid dehydrogenase kinase [Fragilariopsi... [more]
XP_009824900.16.900e-10253.00hypothetical protein H257_02798 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL042nonsL042Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL041nonsL041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR083ngnoR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004830NSK004830Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00570.1NO24G00570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598127gene_7289Nannochloropsis oceanica (N. oceanica CCMP1779)gene
PDK1gene9306Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00570.1NO24G00570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00570 ID=NO24G00570|Name=NO24G00570|organism=Nannochloropsis oceanica|type=gene|length=5916bp
TCCCTACCTCTGTTTAGGCACTATTTTATTTAATTTCTCTGTAACTAAAA
TTTACGACTTCTATTTTGTAACTTTATTGTTAGGGAGACGCGGAGATTTA
TGTTTTCCCTTGTCTTCTCCAAAAGATCTTTCCATGAAAATATGGCCCCG
ATTTCAGCCAGGACTGCGAGTCTTTCATTGCTATGAGGACGGCATTTGAT
CGTCTTAGAGCAATAATGCACGCGCAATACGGGAGCCGCTGGAAAGGTCT
CTCGAGGATCTTGACAGTACCACGCGGCTAGATACAAAGGGACCGCTCGC
GACCAAAGAGTATGTCCGTGCATCTATCACCGTTACAGACTTTTCCGTGA
CAGTCATCTAGATCATATGGCCAGATTTTGTTCCGTTGGTATTGAAGACC
GGACGTGAATGCACGCGTCTACTAAGCTGGGATAGTTACGAAATCGTCTA
AATTGGTAAATGCTAAAAAAGAAGCTCGCTGCGTGTAAAATGACTATCAC
TTAGGCAACAAATAGGCCTGCAAAGGCAACAAAGACAGCGATTGCGACGA
CTATGAACCTTAAGGGTAGAGCAATGACAAATGTGGCAGGGAGGAAGGTT
CGAAAATTCAGAAGCTGCAATGTGGTGCCTACTTCCATATCACCATCACT
CTACATCACTCTTATGTCGTGGAGGCCTTGAAGATGGAATGAAAGGGGTA
GGTAGGTAGGTATCTCTATTTATATCTCTGCCCTAAACAAAAATACTTCA
TTTCCCTATCTTTTCTGATTCCCTGATCTGTCATATACCCCACTATCCTA
CAGCTATTGCCCTTGGTTGGAAGAGTAATTCTCAGTAAAGCCTTTTTCAA
GTTGCAATTGTTATTCTATGGGAATGGGTAGCGATCGGCGCGGCTATATG
CCTGTCTCGAACAAGTAAGACAAAAAGTTAGGGGCAGCACTGGGGAAAGA
TAGGGAGAAATATCGAATTCAGTGGCCGCAGCCACGGAAATGAATCATGC
GGGGCGGGCTTATTTTGGTGCTCACACTTTGATAGAAGTAGATGCCATTA
TGTCGGTGGCAAGGCTCACAATGGTGATTAAAACCCCAAAAAGGTAAAAA
GAGAAAAAAATTCTGTATAGTCTGTCTGGTGGTGGCTATGACAGGCCCTA
TAGTAATTGTAGTAGTACAAGAATTAGAAAACTGAGTGGGAAGAAATTTA
TGATGACGTCATTATGGAGAAGCATGGCGTATAGTTGCACATTGCAAAAA
GCAAAAGCAGTGTATCACAGAAACTTTCTAATTTGCGTCCTTAGGGGTTG
AGAAGGGCTTGGCGAACTCCAAGCGAAGGATAGGCAAAGGCCTAGCAAAG
CTCCGGTAAAAAGGGCAAAAAGGGCAGTCTCCTTTTTGTCTACGCGTTTC
TGCTGCACTCTTCAAGGCTTCCCAGGTTTTCCAAACCTTTCCATTTCATC
TGAAATATTATAAATGGCTGGAAAGAAGGGCTAGTTCGCAAGAGAGCAAG
TCAAAAACACAGAGATTATTTTCCACAAAAAAATGCCAGCAGTTCTTAAT
CGTTTCCCCTCTTTCGCTGGGAACTAAGGGCCTTTCAGGCCTTAATCACC
TCCTAGGTCATGAATACTTGAATATATTCTTGTATGTACTTAAAAGACAA
GTTACCACGTCTATTTGCCCAAAATGTAGATTTACTTCTCCCACCCTGCT
TTTTGCGACCGTCTTTGGGTCCTGTGGGTCTCCAGTCTCCGATATGTAGG
CATGTTTTTGGGATTCAGGCACGCAGCGCGTTAAGGATACGCAACGTGAA
TATTTGAAAGAGCACAATCTTGTAGATTTGGGCATTATTCATTTCCACGC
GTAATATTGTGCGGGCATGGGGTTTCAGACGATCGAAGTAAAGCCTCCTC
GCGTTTTTATGCTCCGCATCCGGATGATACGCGTTTCCACATTTCTGTAC
AGGCCTTGATCTTGCGAGAATATGAGAAGATCACGAAAAGGAGGCCTAGT
TTTCCTCGTCATTCACACACATAGGACATCCTCGTCAAGAATCTGATCTC
ATGCTCTACTGGTAGCACCTGTAAATGTCAGTGGGGCCACTTCCTCTCTA
GGTCTCCAGGCCATCTTCCATTCTTCACCAACCTCAACCTCTTCTCAACA
TCCCCCAGAAACACAACACAAAACTACCCCATCCACGCACACCATGATGG
CCAGCAGCGCCGCCATGTTGGCCCGCAGTCTGGGTCGGGCGGCGAGAAGA
TTAAGAGGCAGCGGTGGTGGCGATGCGCGCTCATTGTCGACGATGCCCGG
GAGCAACAATCGTCACTCTTTTCAGCCTAATACGCAGCAGCGCCGCCGCC
CTTCCTCGAGCTTGGGCTCCCTGAACTACCCGCACGTGGCTCCTGATCCT
CTGGCAGACCCGACTGTCTTTGACGATATAAATACGTATTCCTGCAAGCG
CCAGACGGGTGTGTCTCTCAAGACGTTGTTGGACACAGgtacgtgaagag
ggaatggagggggagagttgagtagtggaaagacgggtggtagatttgaa
tcacatgctccttccccgtgatcgagagagaaagtagaatgtaaggtaga
caatggctggaaccctgccagttgatcggagggtatgaatgtcaaagaca
gcttcctctttaccgacccctcttaaaccctcccccttttttgcatgcac
agGACGAGGGCATCTATTGCAGAAAAAATATTTTGGGAAGGAAGAGAATA
CGACGGCCAGTCAGCAGATGCTTCAGCAGGTAGCTTGTTTTTTGCACCGG
GAGCTGCCCATCCGCCTTGCCCACCGCGTACGGGACTTGGACGCCATgta
cgttcttatgtgtgatacacatgtgcagcattagtatgtttgaatcatgg
atcctgcatacatgcatgtgtggtagatgtatgctatttttttaagtctc
cgaatctgatttggaccagcgaagtatttggatgcattgcttcactctat
cttgcgacgtcttaacagcttggccaaacaaaatcatgagggcataaccc
tccctccctccctccctccttccctctttcccttcccttaagCCCGGTGA
TGCGCGAAATGCCCTCCATCCAACTCGTCAAGACCTGGTACGTCAAATCC
TTCCACGAGCTCCGGAACACCCCCACGCCCAATACTGTGGCCAAAGAGGC
TGACTTCGCCGTTTTACTCAAAAATATCTACGAGCGACACGCCCCCGTCC
TTCTAACCATGGCTCGAGGCGCCTATGAACTGAGGCAAAAGTACGTGGCA
GGCTCCAGCGAATTTTATGACTTGGAGGTGCATAACTTCCTGGACGCATT
CTATTTGAGCCGCATCGGGATCCGGATGCTGATCGGGCAGTACTTGGgtg
agtagttggaagggagggagggagggagggagggagggagagagagaggg
agggagggacaagtgggttgatgagaagtcgcagctctcggcttcgcgca
catgatgactcaagcgctgcagtcgatgctacgtccacaactcctcgtgt
gacaatgccttggccgcaatcgaagatgcttacacacactcacttctata
cgcaatccttcctcgctttctccctcgctccctccctcccactcaattag
AACTCCGCGAACCTCCCAAGCCGGACTACATTGGTCTCTGTTGCCTCCGC
ACTTCCCCCCGCGATGTCGCTCTCACTGCGATCGAAGACGCCAAGTACAT
GTGCACGCGTCAGCACGGAGACGCACCCGAGGTGACCTTGCACGGTCGTC
TCGATTTGACCTTCGCGTATGTCTCCGAGCACGTCCATTACATTTTGTTA
GAACTTTTGAAGAACAGTATGAGAGCCACGGCGGAATTTCATGGGACGGA
TGACATGCCGCCGATTCGAATAGTGATTGCGGACGGGGAGGATAATGAGG
ATGTGGTGATAAAGGTGTCTGATGAGGGAGGGGGGATCCCACGCTCGCAT
ATAAGTAGGATCTGGAGTTATTTGTTCACGACTGCCGACCCCGAGATCCA
GAGGGGGTTTGTGGATCTGTCGCATCCGGCGTCGGATTTTGATACGGCGA
GTCCTTTGGCGGGGTTGGGGTATGGATTGCCGATTAGTCGTGCATACGCG
CGGTATTTTGGGGGGGATTTGTCAATTATGTCTATGGAGGGGTACGGGAC
TGATGCGTTTGTGCATTTGAGTCGGTTGGGGAACCATGACGAGCCTCTGC
CTTAAGTGCGAGAGAGAGCGGGGGAAAAAAAAGGGGGGGCTCCCCGAGTT
TTGGCGTCTGGGCGTGTGTGTGTATGAGATGGGGAAAAGGGGGTTGGGTG
CCTATCCTATCCAACAACAGACAGAAGCAAAAGAGAAAGAATCATATACT
GAAGGACCAAACAGGAAAGTTCCCCGTCCGTGATCATACGGAGTGCGTAT
AAATACACAGAACAGAAAAGAACATCGTTATGTGGTGGCAAGGCGTCAAG
CGCGCACATTAGACCCAATAGCTTTTCTTTCTTCCCCTTGTCTCGCTACT
TACTTGCACGACGACTCAAAGCACATCTGGCTTCAACGCACTCAACCGCT
GCCCCCACATCTCCTCGTCCTTCGCGTCCTCTGTCAAAAAGTACTCGACG
ATCTGCCTCTGGTCCGGCGTTGACAAAATGTTATTTAACCTCTCCTGGTC
CTCCTGCCGACTGTCATCGTTCTTTACCTCAAACGTCACATTATTCACAT
CCTGCACCAATGCCTGCACAAGCATCTGGGCCACATCTAACCGCGATACC
CCACACTTCCCAAACATGTCCCCTTGCCCTATCTCGATCGCGCGCTTGGT
TCCATCCCCGTCCCTCAAACCCCCGGCGCGCACTATGCAATACGACTCCA
AATTCCCCTTTCGAACCGCGTCCTCCCCCCGCGCCTTGGCCTTCAAAGGG
TCCCCTAGAAGCTTACCTACAAAACCATACCCGTCCGGTTTGGAGACGCC
GATGCTCGACAGCAAAATGAATTTGCGGACTGAAGGTACCCCGCCCTCTC
CGGAGAGCTCAGCAGCCTTGACCGCGTTCTCGACACCCAGGCCATCAACC
TGCGAAAAGGTATTCGTGCCAATCACTTCCCGGGACCCCGCGCAATATAT
AACAGCTAACGCGCCCTTCATCACTTCAGTCAGCGCGCTCAAATCTTTGA
CATTCCCCTCAAACAAATCCAGATTCGAACCATCCCAACCAAATAGATCC
TCTGCCTTGTCCAAATTCCGGACGAACGCCCTCACACTAAACCCCTTGCT
CAACAGATCAGTAACCACCCACTGTCCCGTCTTACCCGTCGCTCCTACGA
CCACCACTGGGTTCTCGCGCAGCGCCTTGATCTCTAATCGGGCGTCATTG
TCGTTACTTGCCTCAACTTTTTTGGCATAGGCCTCATCATCCAGATCCGA
TAAGCTCTCCCCATAAAAGACCGTGCCTGCCCCCATGCGCTTCCCAAAAA
AGTCGTCCATCAACCGCGCATTCTTACTTAGCTTGCGGGCCTTGTCCGTC
TTGGCGGCCCGGTCTATTCTCCGTTGCTCCACCGAGTTTAAAGGCCGGTC
GTCGGGGAAGGGGGAGGAGAGAGATGAAGGGGAGCTGCCGCCGTTGGCAT
CTTCTTTGTCATTCTCTGCGCCATCAGCGGCGGCATGAAGCGAGGTTAAG
GGGTACAAGAAGGAGGAGGACTGACGGCGGGTTTGGGAGGGGGCAGAGGC
AACAGAGAGGGAGGCAGTCTGTTGTAGGGGAGGTCGTCGTGTAGCGGGCC
TTTGGAGGACAAAGGACTGTACGACGTGCCGCAGAAACGTCGCCAGGAGA
AGGAAGACTAGATAGCTCAGCCGGTAGGTTTGTCTTCTGCTGCTCGAAGT
ATCCATGGTGATCTGT
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protein sequence of NO24G00570.1

>NO24G00570.1-protein ID=NO24G00570.1-protein|Name=NO24G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MMASSAAMLARSLGRAARRLRGSGGGDARSLSTMPGSNNRHSFQPNTQQR
RRPSSSLGSLNYPHVAPDPLADPTVFDDINTYSCKRQTGVSLKTLLDTGR
GHLLQKKYFGKEENTTASQQMLQQVACFLHRELPIRLAHRVRDLDAIPVM
REMPSIQLVKTWYVKSFHELRNTPTPNTVAKEADFAVLLKNIYERHAPVL
LTMARGAYELRQKYVAGSSEFYDLEVHNFLDAFYLSRIGIRMLIGQYLEL
REPPKPDYIGLCCLRTSPRDVALTAIEDAKYMCTRQHGDAPEVTLHGRLD
LTFAYVSEHVHYILLELLKNSMRATAEFHGTDDMPPIRIVIADGEDNEDV
VIKVSDEGGGIPRSHISRIWSYLFTTADPEIQRGFVDLSHPASDFDTASP
LAGLGYGLPISRAYARYFGGDLSIMSMEGYGTDAFVHLSRLGNHDEPLP*
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Synonyms
Publications