NO24G00550, NO24G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00550 vs. NCBI_GenBank
Match: EWM21140.1 (eukaryotic translation initiation factor 4e type 2 [Nannochloropsis gaditana]) HSP 1 Score: 263.5 bits (672), Expect = 6.900e-67 Identity = 154/309 (49.84%), Postives = 176/309 (56.96%), Query Frame = 0 Query: 3 VDGSVEGPGVTPLQRGYTFYYINKQKAPAENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKEF-----------------------KNRREGGKEGGYF---------------------------------------DRG-----ERGERHVEGGRERREAWTARDRAASADKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGWEVVSARERRPS 245 VDG V GPGVTPLQRG+TFYY +K KA AE +S++R+ASFRTAEGFWRVYNH+LRPHQLREG G EYQLFVEGVKP+ EDP N+KGG+L ++CPPGLTSRYWEEL++AFVGEQIDGGEDEVCGVIVS R +GDVI IWNRHA N++F ++R E G+ DRG ERGER EGG RREAW +R+RA SADKG EGWEVV RERRPS Sbjct: 5 VDGIVAGPGVTPLQRGFTFYYTDKHKAAAETNGNSVERVASFRTAEGFWRVYNHMLRPHQLREGEGREYQLFVEGVKPSGEDPSNSKGGRLSVRCPPGLTSRYWEELVIAFVGEQIDGGEDEVCGVIVSPRSSGDVISIWNRHAGNRDFQVKLVRRLKALWELPPFVPMDYARHRPESGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKNLGRDRGERGMFERGERSAEGG-GRREAWLSRERAGSADKG------------EWRSRGNSTGQHHAPSEGKTDAEGWEVV--RERRPS 298
BLAST of NO24G00550 vs. NCBI_GenBank
Match: EWM21141.1 (eukaryotic translation initiation factor 4e type 2 [Nannochloropsis gaditana]) HSP 1 Score: 260.0 bits (663), Expect = 7.600e-66 Identity = 142/261 (54.41%), Postives = 164/261 (62.84%), Query Frame = 0 Query: 3 VDGSVEGPGVTPLQRGYTFYYINKQKAPAENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKEF-----------------------KNRREGGKEGGYF---------------------------------------DRG-----ERGERHVEGGRERREAWTARDRAASADKG 197 VDG V GPGVTPLQRG+TFYY +K KA AE +S++R+ASFRTAEGFWRVYNH+LRPHQLREG G EYQLFVEGVKP+ EDP N+KGG+L ++CPPGLTSRYWEEL++AFVGEQIDGGEDEVCGVIVS R +GDVI IWNRHA N++F ++R E G+ DRG ERGER EGG RREAW +R+RA SADKG Sbjct: 5 VDGIVAGPGVTPLQRGFTFYYTDKHKAAAETNGNSVERVASFRTAEGFWRVYNHMLRPHQLREGEGREYQLFVEGVKPSGEDPSNSKGGRLSVRCPPGLTSRYWEELVIAFVGEQIDGGEDEVCGVIVSPRSSGDVISIWNRHAGNRDFQVKLVRRLKALWELPPFVPMDYARHRPESGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSKNLGRDRGERGMFERGERSAEGG-GRREAWLSRERAGSADKG 264
BLAST of NO24G00550 vs. NCBI_GenBank
Match: GAX94834.1 (tripeptidyl-peptidase, putative [Pythium insidiosum]) HSP 1 Score: 168.3 bits (425), Expect = 3.000e-38 Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 0 Query: 11 GVTPLQRGYTFYYI--NKQKAPAENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 G TP+Q Y+F YI N KA E+YE SIK + F+T +GFWRVYNH++RP+ L +Y LF G+KP WEDP N KGGK +++ G+ SRYWE+L+LA +GEQ D G +E+CG +VS+RY DVI +WNR+ADN E Sbjct: 19 GETPIQNAYSFSYIKRNSGKAEVESYEKSIKDLGDFKTVQGFWRVYNHLVRPNDL--PNTMDYHLFKTGIKPMWEDPANRKGGKWMVRVRKGIASRYWEDLVLAIIGEQFDVG-NEICGAVVSIRYTEDVISLWNRNADNNE 157
BLAST of NO24G00550 vs. NCBI_GenBank
Match: XP_009837606.1 (hypothetical protein H257_12178 [Aphanomyces astaci] >ETV72820.1 hypothetical protein H257_12178 [Aphanomyces astaci]) HSP 1 Score: 167.9 bits (424), Expect = 3.900e-38 Identity = 76/148 (51.35%), Postives = 102/148 (68.92%), Query Frame = 0 Query: 7 VEGPGVTPLQRGYTFYYINKQKAPA----ENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 V+ G P+Q YTF+Y+ K A E+YE SIK I+ FRT +GFWRVYNH++RP+ L +Y LF G+KP WED N +GGK +I+ G+ SRYWE+L+LA VGEQ D G +E+CG ++S+RYN D+I +WNR+ADN E Sbjct: 12 VDTAGEVPIQNTYTFWYMKKNSGKALEDQESYEKSIKEISEFRTVQGFWRVYNHLIRPNDL--PNTTDYHLFKAGIKPMWEDTANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVG-NEICGAVMSIRYNEDIISLWNRNADNSE 156
BLAST of NO24G00550 vs. NCBI_GenBank
Match: XP_008873140.1 (hypothetical protein H310_08979 [Aphanomyces invadans] >ETV98265.1 hypothetical protein H310_08979 [Aphanomyces invadans]) HSP 1 Score: 167.9 bits (424), Expect = 3.900e-38 Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 0 Query: 8 EGPGVTPLQRGYTFYYINKQKAPA----ENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 + G +P+Q YTF+Y+ K A E+YE SIK IA FRT +GFWRVYNH++RP+ L +Y LF G+KP WED N +GGK +I+ G+ SRYWE+L+LA +GEQ D G +E+CG ++S+RYN D+I +WNR+ADN E Sbjct: 12 DATGESPIQNTYTFWYMKKNSGKALEDQESYEKSIKEIAEFRTVQGFWRVYNHLIRPNDL--PNTTDYHLFKAGIKPMWEDSANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVG-NEICGAVMSIRYNEDIISLWNRNADNNE 155
BLAST of NO24G00550 vs. NCBI_GenBank
Match: CCA14627.1 (eukaryotic initiation factor 4E putative [Albugo laibachii Nc14]) HSP 1 Score: 165.6 bits (418), Expect = 1.900e-37 Identity = 71/148 (47.97%), Postives = 101/148 (68.24%), Query Frame = 0 Query: 4 DGSVEGPGVTPLQRGYTFYYINKQKA-PAENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 D G P+Q YTF+Y+ + A AE+YE SIK + F+T +GFW +YNH++RP+ L +Y LF G+KP WEDP N +GGK +++ G+ SRYWE+L+LA +GEQ D G +E+CG ++S+RYN D+I +WNR+ADN E Sbjct: 15 DDDTTGKSDAPIQNMYTFWYMKRNTANKAESYEKSIKELGDFKTVQGFWCIYNHLVRPNDL--PNTMDYHLFKTGIKPMWEDPSNRRGGKWMVRMRKGIASRYWEDLILAIIGEQFDVG-NEICGAVISIRYNEDIISLWNRNADNNE 159
BLAST of NO24G00550 vs. NCBI_GenBank
Match: XP_009515981.1 (hypothetical protein PHYSODRAFT_309469 [Phytophthora sojae] >EGZ28706.1 hypothetical protein PHYSODRAFT_309469 [Phytophthora sojae]) HSP 1 Score: 165.2 bits (417), Expect = 2.500e-37 Identity = 71/149 (47.65%), Postives = 104/149 (69.80%), Query Frame = 0 Query: 5 GSVEGPGVTPLQRGYTFYYINK---QKAPAENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 G +G TP+Q Y+F+YI + KA +E+YE SIK + F+T + FW++YNH++RP+ L +Y LF G+KP WEDP N +GGK +++ G+ SRYWE+L+LA +GEQ D G +E+CG ++S+RYN D+I +WNR+ADN E Sbjct: 8 GEDKGSAETPIQNMYSFWYIKRSTGNKAVSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDL--PNTMDYHLFKTGIKPMWEDPANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVG-NEICGAVISIRYNEDIISLWNRNADNNE 153
BLAST of NO24G00550 vs. NCBI_GenBank
Match: XP_008898749.1 (hypothetical protein PPTG_06554 [Phytophthora parasitica INRA-310] >ETI31145.1 hypothetical protein F443_21861 [Phytophthora parasitica P1569] >ETK71527.1 hypothetical protein L915_21254 [Phytophthora parasitica] >ETL24971.1 hypothetical protein L916_21121 [Phytophthora parasitica] >ETL78186.1 hypothetical protein L917_20979 [Phytophthora parasitica] >ETM31449.1 hypothetical protein L914_20996 [Phytophthora parasitica] >ETN16421.1 hypothetical protein PPTG_06554 [Phytophthora parasitica INRA-310] >ETO59860.1 hypothetical protein F444_21883 [Phytophthora parasitica P1976] >ETP00964.1 hypothetical protein F441_21743 [Phytophthora parasitica CJ01A1] >ETP29100.1 hypothetical protein F442_21721 [Phytophthora parasitica P10297]) HSP 1 Score: 164.1 bits (414), Expect = 5.700e-37 Identity = 71/146 (48.63%), Postives = 103/146 (70.55%), Query Frame = 0 Query: 8 EGPGVTPLQRGYTFYYINK---QKAPAENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 +G TP+Q Y+F+YI + KA +E+YE SIK + F+T + FWR+YNH++RP+ L +Y LF G+KP WEDP N +GGK +++ G+ SRYWE+L+LA +GEQ D G +E+CG ++S+RYN D+I +WNR+ADN E Sbjct: 15 KGATETPIQNMYSFWYIKRSTGNKAVSESYEKSIKGLGDFKTVQDFWRIYNHLVRPNDL--PNTMDYHLFKTGIKPMWEDPANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVG-NEICGAVISIRYNEDIISLWNRNADNNE 157
BLAST of NO24G00550 vs. NCBI_GenBank
Match: KUF85584.1 (Eukaryotic translation initiation factor 4E type 2 [Phytophthora nicotianae]) HSP 1 Score: 164.1 bits (414), Expect = 5.700e-37 Identity = 71/146 (48.63%), Postives = 103/146 (70.55%), Query Frame = 0 Query: 8 EGPGVTPLQRGYTFYYINK---QKAPAENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 +G TP+Q Y+F+YI + KA +E+YE SIK + F+T + FWR+YNH++RP+ L +Y LF G+KP WEDP N +GGK +++ G+ SRYWE+L+LA +GEQ D G +E+CG ++S+RYN D+I +WNR+ADN E Sbjct: 10 KGATETPIQNMYSFWYIKRSTGNKAVSESYEKSIKGLGDFKTVQDFWRIYNHLVRPNDL--PNTMDYHLFKTGIKPMWEDPANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVG-NEICGAVISIRYNEDIISLWNRNADNNE 152
BLAST of NO24G00550 vs. NCBI_GenBank
Match: XP_004340748.1 (Eukaryotic initiation factor 4E [Acanthamoeba castellanii str. Neff] >ELR18705.1 Eukaryotic initiation factor 4E [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 163.7 bits (413), Expect = 7.400e-37 Identity = 71/150 (47.33%), Postives = 103/150 (68.67%), Query Frame = 0 Query: 2 AVDGSVEGPGVTPLQRGYTFYYINKQKAPA-ENYEDSIKRIASFRTAEGFWRVYNHILRPHQLREGGGEEYQLFVEGVKPTWEDPQNAKGGKLVIKCPPGLTSRYWEELLLAFVGEQIDGGEDEVCGVIVSVRYNGDVIQIWNRHADNKE 151 ++ V+ G L GYTF+++ + A + ENY ++IKRI FR+ EGFW+ YNH++RPH L +Y LF EG+KP WED N +GGK +I+ GL ++YWE+LLLA VGEQ G DE+CG++ S+R+N D++ +WN+ ADNK+ Sbjct: 53 SIPAGVDPEGGHFLSSGYTFWFVRRSGARSQENYANAIKRIGGFRSIEGFWKYYNHLVRPHDL--PNTSDYHLFKEGIKPMWEDDANKRGGKWIIRLKKGLATKYWEDLLLAIVGEQFQVG-DEICGIVCSIRFNEDILSVWNKSADNKQ 199 The following BLAST results are available for this feature:
BLAST of NO24G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00550 ID=NO24G00550|Name=NO24G00550|organism=Nannochloropsis oceanica|type=gene|length=2135bpback to top protein sequence of NO24G00550.1 >NO24G00550.1-protein ID=NO24G00550.1-protein|Name=NO24G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=251bpback to top Synonyms
Publications
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