NO24G00420, NO24G00420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00420 vs. NCBI_GenBank
Match: EWM24328.1 (hypothetical protein Naga_100047g13 [Nannochloropsis gaditana]) HSP 1 Score: 594.0 bits (1530), Expect = 8.800e-166 Identity = 433/1016 (42.62%), Postives = 505/1016 (49.70%), Query Frame = 0 Query: 3 SSGIYFDLPGFELLRPVASTSSXXXXXXXXXXNEPPMLPSSFSTXXXXXXXXISSVEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRGGVLSLSSLRQELESPWNCVKCTYLNAPQNRSCEACGGLNQWRVRLHEKNAAATRAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----WNKVXXXXXXXXXXXXXXXXXXXXXXXXPLAVLLRANPVLIHGGGPFRLLPSDLHLHCLGFLHDHFEYVRLRTVSKAWAGMAEHESLWRPLVERDCGELMTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGIWSCKACGLLQADRFGLHCEFCSAEREILLP---SPSERGRGGEGXXXXXXXXXASSCFRVIKDYSELAEVWRNSNIK-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKRRADAIALEASTKIATGEGESHSRWFMAGTSKSNAWEVANKQTGDFYYVYKVQALDRMLGAKWDSLHRGWEWMSNSCRVALRTRLYATREEICQRDDSLIPITSSFQRCVNKLTQRDWPLLWTCMRAELFLQAEGLRRDVVRHMRGREARLEEKGVVGGYRYLLQDLLWCFSVYSAWVFEVSSFFMKMNDQISGERFRTTTICGEGEREGGGENTLYLSEVALVAFRENVLMHFMIRTPVMRAVEGEREGEGMRLAEFFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGMSGAPRASAQQQELVESEEGEVDDQVLATRVRSHYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXITANLAEELIMLGNMVEELDVLEQGGGKQSEAFRQRLLKPLRATLAELRVDGLGGEGGGTGGEEL-GLREEEDMEGPEVMMTLNENGDQLSRARDGFRRLRRGQGLCDDRGGRGRKRMRLV 1000 +SGIYFDLPGF+LLRPV SS S+FS +SSVE++ G G LSS++QELES WNCVKCT+LNAP +RSCEACGG++QWR+RL EK AAA AHR XXXXXXXXXXXXXXXXXX + A LLRA PVLIHGGGPF+LLPSDL LHCL FLH+ Y LR V+K W +AEHESLWR L E+D E RA XXXXX CGL QAD FGL+CEFCS EREI+LP P+ R GG +SCFRV+KDY ELAE+WR+SN K ER+R EA G E +R FMAGT + +AWEVA +TGDFY++YK++ALDR+ +WDSLHRGWEW+SNSCRVALR RLYATRE+I QRDDSLIPITSSFQ+CVNKLT+RDWPLLW CMRAE LQAE LRRD++RHMRG +RLEEKG+V YR+ LQDLL CF VY+AWVFEVSSFFMKMNDQISGE FR TT G NT YL EVALVAFR++V+ HF I TPV++ VEG+ G+RLA FF+ +G S + E+VE EE EVD++VLATR S A IT LAE+LI LG M EELDV+EQG Q EAFR+ LLKPLRATLAELRVDG+G GG G+E+ G EE +E MM +NE GD++ +R RRL G+ D G KR RLV Sbjct: 2 ASGIYFDLPGFDLLRPVIPASSARKHEVVGKWKPD---ASNFS----MNLPTVSSVERS-VLEDRRRKQRRLEKDREFACTPSMKLDDKEDDEGGLTGCSAG--ELSSMQQELESSWNCVKCTFLNAPDDRSCEACGGISQWRIRLREKKAAAMTAHRRCEERAQEQHQERCRDLMXXXXXXXXXXXXXXXXXXVICVEQEVRPCTSTGFVSSYAHPSTAVPATEALSTSANATAKLLRATPVLIHGGGPFQLLPSDLLLHCLSFLHEASVYAGLRAVAKHWNEVAEHESLWRVLAEKDWQEPKRRA------CLLGGGPSRAGPRSTTPVATGAAGGKEPRTPGWPPSADGRDYARTPSASSPXXXXXXXXXXXXXCGLRQADPFGLNCEFCSTEREIILPPSGPPAGRPTGG--------GEEEASCFRVVKDYQELAEIWRDSNAKAAAAASGQGRDHRRGRLSQTGEGMSGREEKAEESGAQGAELAPFQSGLLKPVSLLAASSPPTALPSSLATLTRAPASGEREREQVGPVPEAGGDPEAGVDE-QARSFMAGTGRESAWEVAETRTGDFYWLYKMRALDRIWAGRWDSLHRGWEWLSNSCRVALRARLYATREQIHQRDDSLIPITSSFQKCVNKLTRRDWPLLWECMRAEFALQAEALRRDIIRHMRG--SRLEEKGLVAAYRFFLQDLLKCFGVYTAWVFEVSSFFMKMNDQISGESFRATTASFGGCGALDAANTPYLPEVALVAFRDHVVQHFSILTPVLQVVEGD---GGLRLAAFFQKGGDEDRGAGREAPRLGEEGGCF----------------KGSSVPMPQQMRLLEVVEPEESEVDEKVLATRGMSFRA----------------LQAAARHGSHRRITMYLAEDLIKLGRMAEELDVMEQGSASQCEAFRRLLLKPLRATLAELRVDGVGRCEGGVRGDEIGGCDREEALE----MMAMNEGGDRVGDSRGISRRLSLGRRAGHDEDGI-VKRRRLV 950 The following BLAST results are available for this feature:
BLAST of NO24G00420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00420 ID=NO24G00420|Name=NO24G00420|organism=Nannochloropsis oceanica|type=gene|length=3124bpback to top protein sequence of NO24G00420.1 >NO24G00420.1-protein ID=NO24G00420.1-protein|Name=NO24G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1000bpback to top Synonyms
Publications
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