NO23G01840, NO23G01840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01840 vs. NCBI_GenBank
Match: KHL10390.1 (hypothetical protein LK11_47920 [Mumia flava]) HSP 1 Score: 288.9 bits (738), Expect = 8.500e-74 Identity = 206/554 (37.18%), Postives = 271/554 (48.92%), Query Frame = 0 Query: 186 DSSSLLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKNAGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDEVAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFA 740 ++ LL L++ QR VT GP LV+AG GSGKTRVLT RIAW++ + +V ILA+TFTNKAA EM+ RV + +G R + V TFHS C+R+LR+ A R+G ++ FT+YD D+ RLM +V + + D + PR K E++ + AK A ND R + A AY TYQ L+A NS+DFDDL++ T LL + + +V +RR+RHVLVDE+QDTN QY +IR LC P L+VVGD +Q+IY FRGA+ R + F DFP + LE NYRST HI++AA AVI GR+ + + L+T A DE EA Y+A E RL G E +A+ YRTNAQ+R EE RVGLPYRVVG F+ RKE+KDA+A+LR+L NP D SL+RI+N P R IG A+A Sbjct: 8 EAERLLAGLNDPQREAVTHTGGPLLVVAGAGSGKTRVLTRRIAWMISQ------------YRVHPGSILAITFTNKAAAEMRSRVAEFVGGRSR---LMWVSTFHSACVRILRKEAQ-----RFGYTSTFTIYDAADSKRLMTQVC------RDLELDPKRFAPR------------------------------------------SVLAWVSNLKNELVDHETAVAKAA----NDSERTY-------------------------AAAYATYQERLKASNSMDFDDLIMTTVHLL-----QAFPDVADVYRRRFRHVLVDEYQDTNHAQYVLIRELCNEP----------DSDLLVVGDSDQSIYAFRGAN-IRNILEFEADFPSARTILLEQNYRSTQHILDAANAVISRNEGRKKK--------NLWSAAGKGELVTGYVADDEHAEAQYVADEVDRLTDEG-EAKPGDVAVFYRTNAQSRVFEEVFIRVGLPYRVVGGVRFYERKEIKDAIAYLRVLVNPADSVSLRRILNTPKRGIGDRAEACVAAYA 439
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_100414947.1 (ATP-dependent DNA helicase PcrA [Mumia flava] >PJJ58433.1 DNA helicase-2/ATP-dependent DNA helicase PcrA [Mumia flava]) HSP 1 Score: 288.9 bits (738), Expect = 8.500e-74 Identity = 206/554 (37.18%), Postives = 271/554 (48.92%), Query Frame = 0 Query: 186 DSSSLLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKNAGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDEVAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFA 740 ++ LL L++ QR VT GP LV+AG GSGKTRVLT RIAW++ + +V ILA+TFTNKAA EM+ RV + +G R + V TFHS C+R+LR+ A R+G ++ FT+YD D+ RLM +V + + D + PR K E++ + AK A ND R + A AY TYQ L+A NS+DFDDL++ T LL + + +V +RR+RHVLVDE+QDTN QY +IR LC P L+VVGD +Q+IY FRGA+ R + F DFP + LE NYRST HI++AA AVI GR+ + + L+T A DE EA Y+A E RL G E +A+ YRTNAQ+R EE RVGLPYRVVG F+ RKE+KDA+A+LR+L NP D SL+RI+N P R IG A+A Sbjct: 46 EAERLLAGLNDPQREAVTHTGGPLLVVAGAGSGKTRVLTRRIAWMISQ------------YRVHPGSILAITFTNKAAAEMRSRVAEFVGGRSR---LMWVSTFHSACVRILRKEAQ-----RFGYTSTFTIYDAADSKRLMTQVC------RDLELDPKRFAPR------------------------------------------SVLAWVSNLKNELVDHETAVAKAA----NDSERTY-------------------------AAAYATYQERLKASNSMDFDDLIMTTVHLL-----QAFPDVADVYRRRFRHVLVDEYQDTNHAQYVLIRELCNEP----------DSDLLVVGDSDQSIYAFRGAN-IRNILEFEADFPSARTILLEQNYRSTQHILDAANAVISRNEGRKKK--------NLWSAAGKGELVTGYVADDEHAEAQYVADEVDRLTDEG-EAKPGDVAVFYRTNAQSRVFEEVFIRVGLPYRVVGGVRFYERKEIKDAIAYLRVLVNPADSVSLRRILNTPKRGIGDRAEACVAAYA 477
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_019143544.1 (DNA helicase PcrA [Aeromicrobium massiliense]) HSP 1 Score: 286.6 bits (732), Expect = 4.200e-73 Identity = 210/561 (37.43%), Postives = 272/561 (48.48%), Query Frame = 0 Query: 187 SSSLLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKNAGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDE-----VAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFAAAE 743 S +LL+ L++ QR+ V GP LV+AG GSGKTRVLT RIAWL+ G G ILA+TFTNKAA EM+ERV L+G R M V TFHS C+R+LR+ A+ ++G ++ FT+YD DA RLM V + + D +++ PR +L +S+ KN R A AY YQ LQA N++DFDDL++ T L + +RE +RR+RHVLVDE+QDTN QY +IR LC LMVVGD +Q+IY FRGAD R + F DFP++ LE NYRST I++AA AVI GR+D+ GE++ G G DE EA ++A E R L + G + +A+ YRTNAQ+R EE RVGLPYRVVG F+ RKEVKDALA++R+L NP D SL+R++N P R IG A FAA E Sbjct: 24 SETLLDGLNDAQRAAVGHVGGPLLVVAGAGSGKTRVLTRRIAWLIAARGAHPG------------SILAITFTNKAAAEMRERVADLVGGKAR---MMWVSTFHSACVRILRREAT-----KFGYTSSFTIYDAADARRLMTLVC------RDMELDPKKVNPR------------------------------------------------------AVLNHVSNLKNELVDHESAR-----------------SRATTPTEETYAEAYALYQQRLQAANAMDFDDLIMNTVHLF-----QAWPDVRESYRRRFRHVLVDEYQDTNHAQYQLIRELCDE-----------QSDLMVVGDSDQSIYAFRGAD-IRNIMEFEQDFPNADTVLLEQNYRSTQTILSAANAVISRNDGRKDKKLWSAEGDGEKIVGYVG-------------DDERDEAQFVADEIDR-LTDEKLAGPQDVAVFYRTNAQSRVFEEVFIRVGLPYRVVGGVRFYERKEVKDALAYVRVLVNPRDTVSLRRVLNEPKRGIGDRAEAALERFAARE 456
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_056209129.1 (DNA helicase PcrA [Aeromicrobium sp. Root344] >KQV74050.1 ATP-dependent DNA helicase PcrA [Aeromicrobium sp. Root344]) HSP 1 Score: 286.2 bits (731), Expect = 5.500e-73 Identity = 215/569 (37.79%), Postives = 275/569 (48.33%), Query Frame = 0 Query: 187 SSSLLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKN--------AGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDE-----VAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFAAAE 743 S +LLE L++ Q++ V+ GP LV+AG GSGKTRVLT RIAWL+ G G ILA+TFTNKAA EM+ERV L+G R M V TFHS C+R+LR+ AS R+G ++ FT+YD D RLM V + D D + I PR +L IS+ KN AG + N A AY+TYQA LQA N++DFDDL++ T LL + +RE +RR+RH+LVDE+QDTN QY +I+ L L+VVGD +Q+IY FRGA+ R + F DFP++ LE NYRST I++AA AVI GR+D+ GE++ G G DE EA +IA E +L G + +AI YRTNAQ+R EE RVGLPYRVVG F+ RKE+KDALA++R+L NP D SL+RIIN P R IG A A AE Sbjct: 23 SETLLEGLNDAQQAAVSHPGGPLLVVAGAGSGKTRVLTRRIAWLIAARGAHPG------------SILAITFTNKAAAEMRERVADLVGPRAR---MMWVSTFHSACVRILRREAS-----RFGFTSSFTIYDAADQRRLMTLVC------RDMDLDPKRINPR------------------------------------------------------AVLNWISNLKNELVDHESAAGRADNPTEE-------------------------IYAEAYKTYQARLQAANAMDFDDLIMNTVHLL-----QAWPDVRETYRRRFRHILVDEYQDTNHAQYQLIKEL-----------TDDQSDLLVVGDSDQSIYAFRGAN-IRNILEFEDDFPNAATILLEQNYRSTQTILSAANAVISRNEGRKDKQLWSAEGDGEKIVGYVG-------------DDERDEAQFIADEIDKLGDAG-VAAAKDVAIFYRTNAQSRVFEEVFIRVGLPYRVVGGVRFYERKEIKDALAYVRVLVNPRDAVSLRRIINEPKRGIGERAEAAVQRLATAE 455
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_056398998.1 (DNA helicase PcrA [Aeromicrobium sp. Root236] >KRC64664.1 ATP-dependent DNA helicase PcrA [Aeromicrobium sp. Root236]) HSP 1 Score: 285.4 bits (729), Expect = 9.400e-73 Identity = 215/571 (37.65%), Postives = 276/571 (48.34%), Query Frame = 0 Query: 187 SSSLLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKN--------AGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDE-----VAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREG--GVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFAAAE 743 S +LLE L+ Q++ V+ GP LV+AG GSGKTRVLT R+AWL+ G G ILA+TFTNKAA EM+ERV L+G R M V TFHS C+R+LR+ A+ R+G ++ FT+YD D RLM V + D D + I PR +L IS+ KN AG + N A AY+TYQA LQA N++DFDDL++ T LL + +RE +RR+RH+LVDE+QDTN QY +I+ L L+VVGD +Q+IY FRGA+ R + F DFP++ LE NYRST I++AA AVI GR+D+ GE++ G G DE EA +IA E +L G EG + +AI YRTNAQ+R EE RVGLPYRVVG F+ RKE+KDALA++R+L NP D SL+RIIN P R IG A A AE Sbjct: 23 SETLLEGLNEAQQAAVSHPGGPLLVVAGAGSGKTRVLTRRVAWLIAARGAHPG------------SILAITFTNKAAAEMRERVADLVGPRAR---MMWVSTFHSACVRILRREAT-----RFGFTSSFTIYDAADQRRLMTLVC------RDMDLDPKRINPR------------------------------------------------------AVLNWISNLKNELVDHESAAGRADNPTEE-------------------------IYAEAYKTYQARLQAANAMDFDDLIMNTVHLL-----QAWPDVRETYRRRFRHILVDEYQDTNHAQYQLIKELTDE-----------ESDLLVVGDSDQSIYAFRGAN-IRNILEFEDDFPNAATILLEQNYRSTQTILSAANAVISRNEGRKDKQLWSAEGDGEKIVGYVG-------------DDERDEAQFIADEIDKL---GDEGVAAAKDVAIFYRTNAQSRVFEEVFIRVGLPYRVVGGVRFYERKEIKDALAYVRVLVNPRDAVSLRRIINEPKRGIGERAEAAIQRLATAE 455
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_069803291.1 (hypothetical protein [Thermogemmatispora onikobensis]) HSP 1 Score: 281.6 bits (719), Expect = 1.400e-71 Identity = 222/617 (35.98%), Postives = 296/617 (47.97%), Query Frame = 0 Query: 190 LLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKNAGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDEVAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFAAAEAQEGKGA----EEGERTGMSAVGCLLSFLPEEELKELVEKLRSLSQPLRVLREGEREGRMKKLK 803 LL L+ QR VT GP L++AGPGSGKTRV+THRIA+L+ G V+ ILAVTFTNKAAREMQER+ KL+G + +GTFH++C RVLR A + L GL+ F + D +D L+K+ LR+ + DE + + ++ IS AKNA SP + AR Y YQ L+A NSVDFDDLL+LT +L E + E Q+RWR++ VDE+QD N QY +IRLL + VVGD +Q IY +RGA E + +F DFP + LE NYRST HI++AA+ V+ R + V +R+ G L EA+++E E Y+A E +LL G +A++YRTNAQ+RALEE R +PY+V+GS+ F+ RKEVKD LA+LRLL NP D SLQRIINVP RKIG + +A E + A E+ G +A L F + L+EL + L P + R ER G +L+ Sbjct: 11 LLAGLNGPQREAVTTTEGPLLILAGPGSGKTRVITHRIAYLVRCRG------------VRPWHILAVTFTNKAAREMQERLEKLVGLS--EAREMYIGTFHAICARVLR--AEADLLAPLGLTRSFVILDTDDQAALVKQ----ALRDLDLDEKQYRV--------------------------------------------------------SLIHALISRAKNAMLSPYQMAE-----------------QARRYTEEVAARVYRRYQQLLRANNSVDFDDLLMLTEQLWRTEPE-----VLERYQQRWRYIHVDEFQDCNVPQYKLIRLL----GRGSYERPGGSGNVCVVGDDDQMIYSWRGASAEN-VQAFERDFPEARIILLEQNYRSTQHILDAAQCVV-----RRNTVRKEKRLWTALG---QGEKLIYHEAYNDEAEGLYVADEILKLLARGVVAQRSEIAVMYRTNAQSRALEEQFLRANIPYKVIGSRKFYERKEVKDMLAYLRLLLNPHDDLSLQRIINVPNRKIGPKSLGELQRWAREEQRSLYDALQRSEDHPTLGRAAKNALQQF--AQLLEELRASVAELRLPELLDRVAERTGYGPELR 514
BLAST of NO23G01840 vs. NCBI_GenBank
Match: OGO14852.1 (hypothetical protein A2Y93_10480 [Chloroflexi bacterium RBG_13_68_17]) HSP 1 Score: 281.6 bits (719), Expect = 1.400e-71 Identity = 206/558 (36.92%), Postives = 278/558 (49.82%), Query Frame = 0 Query: 190 LLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKNAGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDEVAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRL-LKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFAAAEAQEG 747 LLE L+ QQR VT GP LV+AGPGSGKTRVLTHR+ +++ + G G ++AVTFTNKAAREM R+ LL GG G+ + GTFH++C R+LR+ A R GLS F ++DE D L L ++ + + + D +++ P G+V L AIS AKN P+D+ R YE YQ+ LQA ++DFDDLLL T LL +E LR+ +R++ H+LVDE+QDTN QY+I+RLL L VVGD +Q+IY +RGAD L F D+P + LE NYRST I++AA AVI + GR + +R G R +T EA+DE EA ++ + L L G E G A++YRTNAQ+RALEE + GLPYR+VG+Q F+ R+EVKD +A+LRL+ N D SL R++N PPR +G T + +A A G Sbjct: 3 LLEGLNPQQRQAVTAPPGPVLVLAGPGSGKTRVLTHRLGYMLQQRGVLPGA------------VMAVTFTNKAAREMAARLESLL--GGTPAGISL-GTFHALCARLLRREAE-----RIGLSREFVIFDEADQLALARQAIKAL------NLDPKQVQP-----------------------------------------------------GKV-LAAISGAKNELLGPSDL-------------------APADYFAEVTRRVYERYQSLLQANRALDFDDLLLETVRLLRQEE------LRDKYRRQYPHILVDEFQDTNTAQYEILRLLA-----------GEHPDLFVVGDPDQSIYRWRGADYRNVL-RFQKDYPQAAVILLEQNYRSTQTILDAAMAVIDRQAGRHRKQLFTDRGPGQR--------ITFHEAYDEADEAQFVVETIAGLTLTGEAEPG--GCAVMYRTNAQSRALEEAFLKAGLPYRLVGAQRFYGRREVKDLIAYLRLIHNLADEVSLLRVLNTPPRGLGEKTVEGLLAAAGRAGTSG 433
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_108579529.1 (DNA helicase PcrA [Aeromicrobium sp. 592] >AWB93293.1 DNA helicase PcrA [Aeromicrobium sp. 592]) HSP 1 Score: 281.6 bits (719), Expect = 1.400e-71 Identity = 207/555 (37.30%), Postives = 270/555 (48.65%), Query Frame = 0 Query: 187 SSSLLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKN--------AGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDE-----VAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIG 729 S +LLE L++ QR+ V+ GP LV+AG GSGKTRVLT RIAWL+ G G ILA+TFTNKAA EM+ERV L+G R M V TFHS C+R+LR+ A+ ++G ++ FT+YD D RLM + + D D +++ PR +L IS+ KN AG + N A AY+TYQ LQA N++DFDDL++ T L + +RE +RR+RH+LVDE+QDTN QY +I+ L L+VVGD +Q+IY FRGA+ R + F DFP++ LE NYRST I+ AA AVI GR D+ GE++ G G DE EA +IA E +L+ G E + +AI YRTNAQ+R EE RVGLPYRVVG F+ RKE+KDALA++R+L NP D SL+RIIN P R IG Sbjct: 23 SETLLEGLNDAQRAAVSHPGGPLLVVAGAGSGKTRVLTRRIAWLIAARGAHPG------------SILAITFTNKAAAEMRERVADLVGPRAR---MMWVSTFHSACVRILRREAT-----KFGFTSSFTIYDSADQRRLMTMIC------RDMDLDPKKVNPR------------------------------------------------------AVLNWISNLKNELVDHESAAGKATNPTEE-------------------------LYAEAYKTYQGRLQAANAMDFDDLIMNTVHLF-----QAWPDVRETYRRRFRHILVDEYQDTNHAQYALIKELTDE-----------ESDLLVVGDSDQSIYAFRGAN-IRNILEFEDDFPNAATILLEQNYRSTQTILTAANAVISRNEGRRDKQLWSAEGDGEKIVGYVG-------------DDERDEAQFIADEVDKLVDSG-EFSSKDVAIFYRTNAQSRVFEEVFIRVGLPYRVVGGVRFYERKEIKDALAYVRVLVNPRDTVSLRRIINEPKRGIG 441
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_052890587.1 (hypothetical protein [Thermogemmatispora carboxidivorans]) HSP 1 Score: 281.2 bits (718), Expect = 1.800e-71 Identity = 221/622 (35.53%), Postives = 298/622 (47.91%), Query Frame = 0 Query: 190 LLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKNAGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDE-----VAGGERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFAAAEAQEGKGA----EEGERTGMSAVGCLLSFLPEEELKELVEKLRSLSQPLRVLREGEREGRMKKLK 803 LL L+ QR VT GP L++AGPGSGKTRV+THRIA+L+ G V+ ILAVTFTNKAAREMQER+ KL+G + +GTFH++C RVLR A + L GL+ F + D +D L+K+ LR+ + DE + + ++ IS AKNA SP + AR Y YQ L+A NSVDFDDLL+LT +L E + E Q+RWR++ VDE+QD N QY +IRLL + VVGD +Q IY +RGA E + +F DFP + LE NYRST HI++AA+ V++ R+++ + GE+ L EA+++E E Y+A E +LL G +A++YRTNAQ+RALEE R +PY+V+GS+ F+ RKEVKD LA+LRLL NP D SLQRIINVP RKIG + +A E + A E+ G +A L F + L+EL + L P + R ER G +L+ Sbjct: 11 LLAGLNGPQREAVTTTEGPLLILAGPGSGKTRVITHRIAYLVRCRG------------VRPWHILAVTFTNKAAREMQERLEKLVGLS--EAREMYIGTFHAICARVLR--AEAELLTPLGLTRSFVILDTDDQAALIKQ----ALRDLDLDEKQYRV--------------------------------------------------------SLIHALISRAKNAMLSPYQMAE-----------------QARRYTEEVAARVYRRYQQLLRANNSVDFDDLLMLTEQLWRTEPE-----VLERYQQRWRYIHVDEFQDCNVPQYKLIRLL----GRGSYERPGGSGNVCVVGDDDQMIYSWRGASAEN-VQAFERDFPEARIILLEQNYRSTQHILDAAQCVVRRNTARKEKRLWTALGQGEK-------------LIYHEAYNDEAEGLYVADEILKLLARGVVAQRSEIAVMYRTNAQSRALEEQFLRANIPYKVIGSRKFYERKEVKDMLAYLRLLLNPHDDLSLQRIINVPNRKIGPKSLGELQRWAREEQRSLYDALQRSEDHPTLGRAAKNALQQF--AQLLEELRASVAELRLPELLDRVAERTGYGPELR 514
BLAST of NO23G01840 vs. NCBI_GenBank
Match: WP_082480525.1 (MULTISPECIES: DNA helicase PcrA [Aeromicrobium]) HSP 1 Score: 280.8 bits (717), Expect = 2.300e-71 Identity = 236/672 (35.12%), Postives = 313/672 (46.58%), Query Frame = 0 Query: 187 SSSLLENLDNQQRSVVTCGWGPTLVIAGPGSGKTRVLTHRIAWLMLEGGREGGGEIGEGQKVKGQEILAVTFTNKAAREMQERVGKLLGAGGRDGGMPMVGTFHSVCLRVLRQFASSYLEGRYGLSAGFTVYDEEDALRLMKEVLPRVLREEEEDEDRREIGPRIKRRIPKPRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEVLLKAISSAKNAGWSPNDVRRGHLEXXXXXXXXXXXXXXXXXXXXXXLARAYETYQAALQARNSVDFDDLLLLTRELLMEEGREGGKILREVLQRRWRHVLVDEWQDTNRVQYDIIRLLCTRPXXXXXXXXXXXXXLMVVGDLNQAIYGFRGADGERALSSFHLDFPHSLPRRLETNYRSTHHIINAAEAVIQGEGGREDE----VAG-GERVGGMRGVRSSPHLLTVVEAHDEEGEAGYIAQEAKRLLKGGREGGVESLAILYRTNAQARALEEGCRRVGLPYRVVGSQSFFTRKEVKDALAFLRLLANPFDVTSLQRIINVPPRKIGTSTADAFMAFAAAE-------AQEGKGAEEGERTGMSAVGCL-----------LSFLPEEELKELVEKLRSLSQPLRVLREGEREGRMKKLKQRVMKGKE------DVEEEDRGGEDDPLVSGGL 830 S +LLE L++ QR+ V+ GP LV+AG GSGKTRVLT RIAWL+ G G ILA+TFTNKAA EM+ERV +L+G R V TFHS C+R+LR+ A+ R+G ++ F++YD D+ RLM V R++G KR P+ +L +S+ KN ++ GH A AY YQ L+A N++DFDDL++ T L + +RE +RR+RHVLVDE+QDTN QY ++R LC LMVVGD +Q+IY FRGA+ R + F D+P++ LE NYRST I+NAA AVI GR+D+ AG GER+ G G DE EA +IA E RL G + +A+ YRTNAQ+R EE RVGLPYRVVG F+ RKE+KDALA++R L NP D SL+RI+N P R IG A FAA E Q K A + ++AV LS P + + E L ++ + E R++ L + V +E V +E+ G ED L G L Sbjct: 36 SETLLEGLNDAQRAAVSHAPGPVLVVAGAGSGKTRVLTRRIAWLIAARGAHPG------------SILAITFTNKAAAEMRERVAELVGGPSR---AMWVSTFHSSCVRILRREAN-----RFGYTSTFSIYDAADSRRLMTMVC-------------RDMGLDPKRVNPR-----------------------------------------------AVLHWVSNLKN-DLVDHESAGGH----------------ATNGTEELYAEAYGLYQQRLRAANAMDFDDLIMQTVHLF-----QAFPDVRETYRRRFRHVLVDEYQDTNHAQYALVRELC-------DPETDPDLDLMVVGDSDQSIYAFRGAN-IRNILEFEEDYPNASTVLLEQNYRSTQTILNAANAVISRNEGRKDKNLWSAAGEGERIVGYVG-------------DDERDEAQFIADEVDRLTDAG-DAKASDVAVFYRTNAQSRVFEEVFIRVGLPYRVVGGVRFYERKEIKDALAYVRALINPRDTVSLRRIVNEPKRGIGDGAQAAVERFAAREQISFWDGLQRAKEAGDLASRSLNAVTTFAETMAELRELALSGEPADVVLEAALTRTGYLTALESSKDPQDETRVENLAELVAVAREFVVNASTVTDEETGREDGDLTRGSL 583 The following BLAST results are available for this feature:
BLAST of NO23G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01840 ID=NO23G01840|Name=NO23G01840|organism=Nannochloropsis oceanica|type=gene|length=4948bpback to top protein sequence of NO23G01840.1 >NO23G01840.1-protein ID=NO23G01840.1-protein|Name=NO23G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1392bpback to top Synonyms
Publications
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