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Properties
| Property Name | Value |
|---|
| Description | Poly-binding protein 4 isoform c |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr23 | genome | chr23:538565..541658 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01460 vs. NCBI_GenBank
Match: EWM23629.1 (poly -binding protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 89.0 bits (219), Expect = 6.500e-14 Identity = 61/207 (29.47%), Postives = 99/207 (47.83%), Query Frame = 0
Query: 195 GCIIGHGGNVIKSIRDISGAYVTILDRGSENRNSSYRLVTLVGPLQAVGTAIQMIGLQADLFDNDLSVDQSGLTQVMSGGSGLNDYQHPSMATQSSVSSAPSYVSHPLYSRGTSHEREAGMVNMLGHPGSIGMGIHMIVDSVMLGKLTGKYWWRVNEIQWQTGVRRIQVLSTSESKQEGSIRNERIVVILGTAEQCLRAHREITLIL 402
G +IG GG+VIK IR+++G + I ++R+ ++RLVT+ G +Q V +A+++I QA LF++ GG DY P G+ +++DS G++ GK +NEI+ Q+ RIQVLS ES +EG++ ER+++++G AE C AH+ I +L
Sbjct: 216 GGVIGRGGDVIKGIRELTGTRIHISPAAEDDRDPAFRLVTVSGSVQEVCSAVELISRQAGLFES------------QQGGEDGEDYPPP--------------------------------------------GLRLVIDSSHAGQVIGKKGATINEIRTQSQA-RIQVLSDEESAEEGALSMERVILLIGEAEACRLAHKMICSLL 365
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01460 ID=NO23G01460|Name=NO23G01460|organism=Nannochloropsis oceanica|type=gene|length=3094bp
CAGTCGTTACAAAACCGAAAACCTTTCCCCTTCTTCCTTGTCTTGTGAGT
TGTGATAAGCTTTTCTTCGAGACGCAAGCTCATCATCGAGGTGATTTTGT
CTGCTTACAGGCCTTGAGGCATTGCTGACCTTCCTAAGGACATACATATA
CCATATGTTGATTTTCCTTTTTCCCCTTTTACTACGCGGAGGCCCATATC
AACGGGGGAGCGTTTCCACTCGACGCCCATCATACCGCTGTCTTAGCTCC
TGAGCTAACGATAAGTCTCGTCGAGCTATGGTATTTTACCTCTAATAGTA
AAGGGCATGGCAATTTCACCCGCCACATCCGCGGCATCGCCCACGACCAT
CAGCAGCAATGCGTTGCGGCCGTCGAGGCCCTAGACTAGAGGGCCCATTC
CCCGGGGATATGTCTCTTTGTGGCGTTACGTATGGTTTCCTTTCACGCTC
TCAACATCCAAAGACTCTTAACACCAAACAAGACCAGGTTCTGCAGGGTC
AAGCAGCTCAGTGACACGGGGGGACGCAGCGGAGTTGCAGGCTGGTTGGC
TCGAAGTTCCACGTGATTTCGCGTTGCCTCTGCACGGAGAGGGTTACTAC
GAGCCGCCATGGACCCTGATGCGACACTCACAGATCAGGGCGACCAACGA
AAGgtaagccgatgaaagacattcgagagtcaagaaaaaatcctggccag
tgtgtcgttggaacccgatgcagcgatatcaggatattgaacctaaatct
cattataaatcgcacagACCCCGTCATGTGTCGTTGGCCTGGATAATCTT
TCTCTCGACAGAGAGGAGATTTGCGAGGTGGAAGCGCTCAAGGCCAAGAC
GAGCAGTGTCCACTCAACGACGGCTCCCATTGGGCTAGATAGTGGCATCT
GGTCGGTCCAAAACTCTTCTGAGTTCTGTTCACTGCCCGCCTCTTTTGCT
TCGTCGAATCTCAATCATAACGCGGCTAACTTTCATCCGGCCGCTTCATC
ATTTGGCGCCTCGCTTCACCTTCCCCTCACCGTCGCCGAGACCTCCTGTA
GCACTTTCGGTAGTTCCGACCATCCACACATAAGCAACAAGGCATATAGC
GACCAAAATTATACCCACGCAAACCTCCCCATATTTTCGCTGTCCAGCTA
TCTGGAGAGTAGTTTTGCGTCTCCGATATCCGATGACATGCTCTACGTCG
CTTGTAATAACATCAAGCTCCCTTCCGTACTTCCGAGTGGCACAACCAGG
AGGCGCAAACCCACTACCACCACTACACGCATCCTTCTGGCCGCGCATTG
CGCCGGCTGTATCATTGGACATGGTGGAAATGTCATCAAGAGTATTCGTG
ACATCTCGGGTGCCTATGTGACCATACTTGACCGTGGAAGCGAGAATCGG
AACAGCTCGTACCGTCTGGTCACGCTCGTCGGCCCCTTACAGGCCGTGGG
GACAGCCATACAGATGATTGGCCTTCAGGCAGACCTCTTTGATAATGATT
TGTCTGTGGATCAAAGTGGATTAACTCAGGTCATGAGCGGCGGGAGCGGC
CTCAACGATTATCAACACCCGTCAATGGCAACCCAGAGCTCCGTTTCATC
AGCCCCGTCTTATGTGTCTCACCCCCTGTACAGCCGTGGGACTAGCCACG
AGAGGGAAGCTGGAATGGTCAACATGTTGGGTCATCCAGGGAGCATAGGC
ATGGGCATTCATATGATTGTTGACAGTGTGATGCTGGGCAAGCTGACCGG
TAAGTATTGGTGGAGGGTCAACGAGATACAATGGCAGACGGGAGTGCGCC
GGATCCAAGTCTTGAGTACAAGCGAAAGTAAGCAAGAAGGCAGCATCCGG
AACGAGAGGATAGTGGTGATCTTGGGAACAGCGGAGCAGTGTTTGAGGGC
ACATCGAGAGATCACCTTGATTCTGGAGGCGGATCCCCTGAGTCTCGAGC
GCAGGGAGGAACAGCGAGGCCTAGGAGAGCGAGGGAGACAGAACGGTCCA
TGTGACAACAACCTTACCAGCTTAAAAGTTGATTCAACACCAATGAAGAG
CCCCTCATCGGTTCAGTGCCTATCATTGCTGGAGCGAGAAGAGAAGGAAG
AATATGACAACTCGCGAGACAGAGCAGGCTGTGAATGGCACTGGGATCCC
AACACAAATGCCGCTGGTGAGAAGCAGGAGAAGGACGAGGGCAACGAGGA
AGATCAGGGAAACGATGAAGTGAGCAAATTTTCCTCAAGTTTCATTGCTC
CCAAGGCCGAGGTCACCATGGCGGCAAAATCTCTGAGCGTGGGGGCTACT
GGGGCAGGGAATGTTTCAAGGACCACAAGCTGTGAGTCTCAGGCATTTCC
GGCCCCTGCGATGTCCGTGAAACTTCTTCCCTCCACCCTTTCCGAAAAGC
TAACGACAGATAAGGCCCGTGCCATAGCCACAAATCCCCTTTCTCTCCCC
TCTACGGTCTTTTCGCCCCTGCCTCTCCAGCCTTCGTCCTCGTCGTCTTC
GGCAACATCGTCGCTTTCCTCCCCGGTGCCATCGGTAGACGAGTGTGGGA
ACACTTCTGTCCAGAGCGTGGTCAACGCAGATGCGAAAAAGAACTTTCGG
GAATTTTCTGCACAGTTCGTTGTGTACATCTCTAACCAAAACATCGGGAG
GTTGATTGGTAAAGGAGGCAGCACGATTCGGCTGCTGCGTCATGAGACAA
AGTGTCAGATTGAGGTTGAAAATTACCATCACTTCATGGACATGCGAGAG
GTGCGAATCAGAGGGACTCTTCAGCAGGTCCACATGGCTGTTGGCATGCT
CGGGCACCAACTGTTTGGTCGGAAAGATGGAGTGTGTTAACTGATGTTAT
TGTAGTCCCTGTCGGTTAGCTAGTAGCGAACAGTAACATACATAGGTACT
TACACCTATAACACTAGTAAAGACTCATTGAATCGAATTTAGATTTCATA
TTTGCTTATCTGTAGGGGAAAGTGTGCGTAGCTCCTTTTGGAGACTTAGA
AAGGCACGAATATGATGGTCAGCTATTGCCATAAGGAGATAGATTTGTCC
GTAGGTTTAGTATGTATTTTAAAAGAAAATTTTGAATAAAAATA back to topprotein sequence of NO23G01460.1 >NO23G01460.1-protein ID=NO23G01460.1-protein|Name=NO23G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=706bp
MDPDATLTDQGDQRKTPSCVVGLDNLSLDREEICEVEALKAKTSSVHSTT
APIGLDSGIWSVQNSSEFCSLPASFASSNLNHNAANFHPAASSFGASLHL
PLTVAETSCSTFGSSDHPHISNKAYSDQNYTHANLPIFSLSSYLESSFAS
PISDDMLYVACNNIKLPSVLPSGTTRRRKPTTTTTRILLAAHCAGCIIGH
GGNVIKSIRDISGAYVTILDRGSENRNSSYRLVTLVGPLQAVGTAIQMIG
LQADLFDNDLSVDQSGLTQVMSGGSGLNDYQHPSMATQSSVSSAPSYVSH
PLYSRGTSHEREAGMVNMLGHPGSIGMGIHMIVDSVMLGKLTGKYWWRVN
EIQWQTGVRRIQVLSTSESKQEGSIRNERIVVILGTAEQCLRAHREITLI
LEADPLSLERREEQRGLGERGRQNGPCDNNLTSLKVDSTPMKSPSSVQCL
SLLEREEKEEYDNSRDRAGCEWHWDPNTNAAGEKQEKDEGNEEDQGNDEV
SKFSSSFIAPKAEVTMAAKSLSVGATGAGNVSRTTSCESQAFPAPAMSVK
LLPSTLSEKLTTDKARAIATNPLSLPSTVFSPLPLQPSSSSSSATSSLSS
PVPSVDECGNTSVQSVVNADAKKNFREFSAQFVVYISNQNIGRLIGKGGS
TIRLLRHETKCQIEVENYHHFMDMREVRIRGTLQQVHMAVGMLGHQLFGR
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