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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr23 | genome | chr23:405577..409852 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005379 | Uncharacterised_XH |
Homology
BLAST of NO23G01110 vs. NCBI_GenBank
Match: EWM22930.1 (putative domain XH [Nannochloropsis gaditana]) HSP 1 Score: 199.9 bits (507), Expect = 4.500e-47 Identity = 135/309 (43.69%), Postives = 161/309 (52.10%), Query Frame = 0
Query: 537 AMAPNPEGILRLMEEGMEGEGEEGREEGVMNLTLEGAREEIGRLRRRVIELEEEMEENDNMEMMNRLVSIDIARTREIGAVKQLLLKLGQEYPDVVDTKWMCEATEQEVLEALRA---------------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPNA----------------------------MHMTEEGFRTVMARVDAIVRDASFDPLIRSEGKIVGVDTQHMVLRNLKFEYGPAVADLVVRKKREVEKYCPSGSYPVLVLWGGDE---GGRE 788
A APNPE I G E + + GRE G ++ AR EI RL V L E EEND+ E++NRLVS++ RTRE+ AVK +LL+ GQ YPDVV TKWMCEATE EV ALRA XXXXX H ++ H+T+EGFR VM R+DA +RDASFDPL+R EG+IVGVD HMVLRNL+ EYG A+A+LVV KK+EVE+YCPSGSYPVLVLW G+E GGRE
Sbjct: 2 AAAPNPEPIF----HGDEAQAQGGREGGREVTSVVEARAEIARLEGLVRRLRREAEENDHGELINRLVSVEADRTRELNAVKAVLLQTGQNYPDVVRTKWMCEATETEVAAALRANGSSXXXXXXXXXXXXXXXXXXXXXXEEGXXXXXREGLDEEGGSSLPPSLPSSTSLTADACDRVSDVFQSHQSSPRDPYQPGHARXXXXXXXXXXXXXXXXXAHLTDEGFRRVMTRIDATIRDASFDPLMRQEGRIVGVDWDHMVLRNLQEEYGRAMAELVVAKKKEVERYCPSGSYPVLVLWAGEEGRGGGRE 306
BLAST of NO23G01110 vs. NCBI_GenBank
Match: EWM24364.1 (putative domain XH [Nannochloropsis gaditana]) HSP 1 Score: 102.1 bits (253), Expect = 1.300e-17 Identity = 54/111 (48.65%), Postives = 70/111 (63.06%), Query Frame = 0
Query: 713 VDAIVRDASFDPLIRSEGKIVGVDTQHMVLRNLKFEYGPAVADLVVRKKREVEKYCPSGSYPVLVLWGGDEGGREEGHELALLEVVSRMVFALRTYRNRLKRKRSNYRVEE 824
VD++VRDA+FDP R G+I+G + H +L +L E+GPA+ADLVV KK E+EK+CPSG YP VLW +EG E+ + VV RMV LR RN R + R E
Sbjct: 139 VDSLVRDATFDPFHRQHGRIIGTNHSHKLLLSLCEEWGPAMADLVVLKKEEIEKFCPSGHYPTPVLW-------KEGKEVTIGAVVRRMVEVLRETRNTKDRDKVRKRERE 242
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01110 ID=NO23G01110|Name=NO23G01110|organism=Nannochloropsis oceanica|type=gene|length=4276bp
CAGTCTACCTGAAACCATAGGCTAACAGCCATCCGGCAGCCTTCGTTTTA
TCCCGCAAGTATTCACCGGACGACGCTCCAGAGCAAGACCTCAGTGCCGG
CAACGTCGCAAGGGCCAACTGGGAAGCAAGATTTGCGATACCCAAGAAAC
TGCATCTAATCATCGCCAGCACGGCCACTTATGACGTCGGGTGGTGACAG
CGCCGGAGGAAATACTCCTTTCGGCTCGACTTCCAGCGGCGGCGCCGCTG
CTGGCTGCACTACCCCCCTGCCCGCTACAGCGTCTCGAGACAGTTACGGT
AGCCGCAACAGCACTGATGTGGATGGGGCCCTAAAGTATCAAAAGGGTGG
CGTGCATGGGGTTCTCAATCCTGTTACCGCCCCTGCGGTCGGCGCGGCAG
CCATAACAATGGCAGATGCTCCTCCAGCCCAAGCACGTGAATTCAGAACA
CTCGCTTCCATCTTTCCTCGACCCCTGCCCAGCCCCTCAAATGGCACCGG
TCATTTTGGTGCTACCACAATGACCGTCTCTCCCTTGTCATGGCTCGCCC
CTTCCGTCCCTCGTCCTCCTTCTCTCCCGTCCTCCACGGCGACCCTAGTT
ACGACTGCGCCCTCCAAGATAAATCCGAGCTCAGCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTC
AAGCTCTGGCGCTGGACGAGGGAATTATGCATGAGAAAAGGAATGGCAAC
CCTAGCAGCAGCAACAATGACAATAGCAGCAGTAGCTGTAGGAGCAGGGA
CGCGCTGGGTTTGATAATTGCGCGATACTCCACACACGGAGATGAAGAGG
ACCGGGACAAGGCGGTGAAAGAGGCAGGGGCAGCGACAAGACCGCCACTC
GACGAAGCAGTTATATGGCCATCAGCTGTAGCAGAGGAGAAGGAAGCAGA
GGACGGGAGGGAAAATAGGACGGACGCGATGGAGGGAGTAACGGTCCCGA
GGACTCAAATGGCGGCATGGGCAGCAGGGGCAGTACGATCGGCCGAATCA
GCAGCAACAACAAGACTATCACACACACGAACGACAGCCGACCCTGCCAG
TGGCGGAGGAGGAGGCGGGTACCTAAACAACACCTTCCACGCCACCCACG
CCACCCACTCCCCGTTCCTACCCCCCTTCTCCGCCTGCGCCTCCCCTCCG
AGCCCCCTCCGCGCCCGCACCAGCCCCAGCCCCAGCACCTCCTGTTCCTG
CTCCGCCTTCTCCTCTCACTGCCCGAGGGTCGAGGAACTAACAAATGCTC
TTCGAGCGAAAGAAGAAGCGCTCCATCAAAAAACAATTGAGCTCCAAACC
CTCCGAGACCACCTCGCAGCCTCCTCCTCTTCCTCCTCCTCTTCCCCTTC
AAGCACCGCCAATGAGCTCACTGTCCTGCGTGCCCACCTCACCAACAAAG
ACACGGAGCTTCGATCCCTTCAGGACCACGCCGCCACTGCTAAAGCCTGG
TGTCGGAAAGTGGAAGAGGACCGCGTCCGCCTGGTCTCGGCCGCTGACCA
TTCAAAAGTTCAAATCGAGCGAAAGCTGTTCGAATCTGAAGAGGCTCGAA
AACGGTCTGTTGGAAGGTTAGAAGAAGAGATACGCCGGGTGCGAGAGGCG
GCCGTAAAGAAGGAGGCAGAGATGGAGGAGCAGTTGAGGAAGGAGAGGAC
CGCACGGGTGAAGTTGGTACAAGGTGACTTCGTAAGAGAAGGAGGAGGGA
GGGAAGGAGACAGGAATGGAAGGAGAAGATGGGTGGCGGCAATGGCTCCG
AACCCGGAAGGCATCTTACGCTTGATGGAGGAGGGGATGGAGGGAGAGGG
GGAGGAAGGGAGGGAAGAGGGGGTGATGAATCTGACTCTGGAGGGAGCGA
GGGAGGAGATTGGGAGGCTGCGAAGGAGGGTGATAGAATTGGAGGAGGAG
ATGGAAGAGAATGATAATATGGAGATGATGAATCGGTTGGTGAGCATTGA
TATCGCGCGGACAAGGGAAATTGGGGCCGTGAAGCAGTTGTTGTTGAAGT
TAGGACAAGAGTACCCGGATGTGGTCGATACCAAGTGGATGTGTGAGGCG
ACGGAGCAGGAGGTCCTCGAGGCCTTGCGTGCTCGTAGCACCACCAGCAG
CAGTAGCAGCAGTTCTGCAGGGGGAATGTATTGTACCCGTCGTGGAAGCA
ACGGCGACTCGTCCTTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCT
TCCGGCGAAGAGCATCCAAACGCCATGCACATGACGGAGGAAGGGTTCCG
GACCGTGATGGCACGCGTCGACGCCATTGTCCGCGACGCCAGTTTCGATC
CGCTCATCAGGAGTGAGGGAAAGATTGTGGGCGTTGACACCCAGCACATG
GTCCTCAGAAATCTGAAATTCGAATATGGGCCGGCCGTGGCGGATTTGGT
GGTGAGGAAAAAGAGGGAGGTGGAAAAGTACTGCCCCAGTGGGAGCTATC
CTGTGTTGGTTTTGTGGGGAGGGGATGAGGGAGGGAGGGAGGAAGGGCAT
GAGTTGGCTCTGTTGGAGGTGGTGAGTCGGATGGTGTTTGCGCTCCGAAC
TTACAGGAACCGGTTGAAGAGAAAAAGGAGCAATTACAGGGTGGAAGAGG
GGGCGTTTGAGCAAGACCGGGCGAGTGATGAGCTGCGACAGCTGTTTGCC
TCTTCGTCATCTTCAGGGGGTGGAGGAGGAGGTGGAAGAGGAGGAGGAGG
AGGAGGCGGGGGGGGCGATGTGGGGAGATTGGTGGATGTCCTTTTTTCGC
CCGCAAGTAATTTGACAGGGATGGGAGGAGGAGGGGCGCCCTCTTCCTCC
CCTAATgtgaatatatttgctgatggtcttccgactcaatcacgacgtcg
tgcctcccttccctcctccagtggtgggggtgaggaccctttcccccccc
ccctcctccgccctccctcccccctctcctcgcccctacccttgagaaag
cgtacaaacactggctcctgcttcactttccttccctgaacctccagACC
GCCGGTATTCAACTTACGTGGGCCCAAAACGCCCTCCGTCGCCTCCTCCC
CTCCCTCCCTCCCTCCCTTCCTCCCCCTTCCTCTTCGGCGGCGGCTGCTG
ATTCCAACAGCACCAGCATTCCCTCCCTTCCCTCCCCCCCTCTACCCTCT
TTCCCTTCCCCGCCGTGGCAGACTATGGGCGACGTTTCATCCGTCGTGTC
CTCCCTGCAGGCCTCGCCCTCCCTCCTCGAGAAAGAAATAATGGAAAACC
GTTCCCGGCCCGTCATTACCGCCCTGCGACGATTCTGCTGCTGGGTGCGT
GGAGACTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCATCCTGGGGAAGGA
GGATGAGGAGGAGATGCTGCATGAGGGGGAGGGTGGGGGCGAGGGAGGGT
TGGGAAAGGAAGTGCAGGCGGGCTTGTTGAAATACATTGGGAGAGTAAGT
GGAATACAGGATTCTACCCGAAGAGACTACGTGATGAAATGCGATGGGAT
ATTAGCGATCTTATTGGAGAGAGTGATGAGGCGGGAAGGAAGGGGAGGGG
GCAAGAGATTTGCGGGGGATGGAGAGGGAGGAGGAGGAGGAGGAGGAGGA
AGAGGAGGAGGACAGGGAGCAGGGAGGGAAAGAGGGCGGAGTGTTCTGGA
GACGAAGGAGGAGGTGGTGGAGTTTTACAAGGCAAACGAGCAGATCTTTT
TAGATTATATGCAGAACTTGGGCGCGGCGTCGCAGGATCGAGCGAAGgta
ggtagatagggaggggggaatgagggagggagggagggagggaaggaagg
acaggacggacttatgttcgtatacgacgtgctcacacacagctgtcttt
ctatgcatcgaaagtaggaaaattattacatccttgagaaatgataaccg
aataaggatactaccacacagtaattaaataataaattaataagctcaat
gataagaaataccaccatgcacacacacagCGGTCGGCTTTGAGGTACCT
AATAAACTACTTAGGCCTTGATCAAATGCAGAACATATGGGCGCGGGGCT
CCTCCGCTGTCTCTGTTGGGACAGCAGCCGCAACAACAAGAGGAGGAGGG
GGGGGGGTAGCGGCCGAGGGAGTAGTGAGGAGGAGGACGAGGAGGACGAG
GAGGACGAGGAAGAAGACGAGAGGTCGGTGTCCTCTGACTCCGACATCGA
GGAGGAAGAGGAGAGGGGAGGGATAA back to topprotein sequence of NO23G01110.1 >NO23G01110.1-protein ID=NO23G01110.1-protein|Name=NO23G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1224bp
MTSGGDSAGGNTPFGSTSSGGAAAGCTTPLPATASRDSYGSRNSTDVDGA
LKYQKGGVHGVLNPVTAPAVGAAAITMADAPPAQAREFRTLASIFPRPLP
SPSNGTGHFGATTMTVSPLSWLAPSVPRPPSLPSSTATLVTTAPSKINPS
SASSSSSSSSSSSSSSSSSSSSSQALALDEGIMHEKRNGNPSSSNNDNSS
SSCRSRDALGLIIARYSTHGDEEDRDKAVKEAGAATRPPLDEAVIWPSAV
AEEKEAEDGRENRTDAMEGVTVPRTQMAAWAAGAVRSAESAATTRLSHTR
TTADPASGGGGGGYLNNTFHATHATHSPFLPPFSACASPPSPLRARTSPS
PSTSCSCSAFSSHCPRVEELTNALRAKEEALHQKTIELQTLRDHLAASSS
SSSSSPSSTANELTVLRAHLTNKDTELRSLQDHAATAKAWCRKVEEDRVR
LVSAADHSKVQIERKLFESEEARKRSVGRLEEEIRRVREAAVKKEAEMEE
QLRKERTARVKLVQGDFVREGGGREGDRNGRRRWVAAMAPNPEGILRLME
EGMEGEGEEGREEGVMNLTLEGAREEIGRLRRRVIELEEEMEENDNMEMM
NRLVSIDIARTREIGAVKQLLLKLGQEYPDVVDTKWMCEATEQEVLEALR
ARSTTSSSSSSSAGGMYCTRRGSNGDSSFPSSSSSSSSSSSGEEHPNAMH
MTEEGFRTVMARVDAIVRDASFDPLIRSEGKIVGVDTQHMVLRNLKFEYG
PAVADLVVRKKREVEKYCPSGSYPVLVLWGGDEGGREEGHELALLEVVSR
MVFALRTYRNRLKRKRSNYRVEEGAFEQDRASDELRQLFASSSSSGGGGG
GGRGGGGGGGGGDVGRLVDVLFSPASNLTGMGGGGAPSSSPNTAGIQLTW
AQNALRRLLPSLPPSLPPPSSSAAAADSNSTSIPSLPSPPLPSFPSPPWQ
TMGDVSSVVSSLQASPSLLEKEIMENRSRPVITALRRFCCWVRGDSLPPS
LPPSLILGKEDEEEMLHEGEGGGEGGLGKEVQAGLLKYIGRVSGIQDSTR
RDYVMKCDGILAILLERVMRREGRGGGKRFAGDGEGGGGGGGGRGGGQGA
GRERGRSVLETKEEVVEFYKANEQIFLDYMQNLGAASQDRAKRSALRYLI
NYLGLDQMQNIWARGSSAVSVGTAAATTRGGGGGVAAEGVVRRRTRRTRR
TRKKTRGRCPLTPTSRRKRRGEG* back to top
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